RNA–Protein interactions for RNA: ENST00000215730.11

SNAP29-201, Transcript of synaptosome associated protein 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAP29, Length 4,287 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP29-201ENST00000215730 KIF2CQ99661 725 aa17.34■□□□□ 0.37
SNAP29-201ENST00000215730 AKAP4Q5JQC9 854 aa17.33■□□□□ 0.37
SNAP29-201ENST00000215730 R3HCC1Q9Y3T6 440 aaKnown RBP17.33■□□□□ 0.37
SNAP29-201ENST00000215730 DCTN1Q14203 1278 aa17.33■□□□□ 0.36
SNAP29-201ENST00000215730 IFT57Q9NWB7 429 aa17.33■□□□□ 0.36
SNAP29-201ENST00000215730 USP6P35125 1406 aa17.33■□□□□ 0.36
SNAP29-201ENST00000215730 A0A087WZG4 1122 aa17.33■□□□□ 0.36
SNAP29-201ENST00000215730 MBIPQ9NS73 344 aa17.33■□□□□ 0.36
SNAP29-201ENST00000215730 C3P01024 1663 aa17.32■□□□□ 0.36
SNAP29-201ENST00000215730 NBPF6Q5VWK0 638 aa17.32■□□□□ 0.36
SNAP29-201ENST00000215730 AEBP1Q8IUX7 1158 aa17.32■□□□□ 0.36
SNAP29-201ENST00000215730 NBPF4Q96M43 638 aa17.32■□□□□ 0.36
SNAP29-201ENST00000215730 REC8O95072 547 aa17.32■□□□□ 0.36
SNAP29-201ENST00000215730 VPS72Q15906 364 aa17.32■□□□□ 0.36
SNAP29-201ENST00000215730 PHACTR3Q96KR7 559 aa17.32■□□□□ 0.36
SNAP29-201ENST00000215730 GNPATO15228 680 aa17.32■□□□□ 0.36
SNAP29-201ENST00000215730 DCCP43146 1447 aa17.32■□□□□ 0.36
SNAP29-201ENST00000215730 NFATC2IPQ8NCF5 419 aa17.31■□□□□ 0.36
SNAP29-201ENST00000215730 MIS18AQ9NYP9 233 aa17.31■□□□□ 0.36
SNAP29-201ENST00000215730 VPS37DQ86XT2 251 aa17.31■□□□□ 0.36
SNAP29-201ENST00000215730 SLIT1O75093 1534 aa17.31■□□□□ 0.36
SNAP29-201ENST00000215730 ZSCAN23Q3MJ62 389 aa17.3■□□□□ 0.36
SNAP29-201ENST00000215730 CWC22Q9HCG8 908 aaKnown RBP17.3■□□□□ 0.36
SNAP29-201ENST00000215730 ADGRB2O60241 1585 aa17.3■□□□□ 0.36
SNAP29-201ENST00000215730 ARHGAP23Q9P227 1491 aa17.3■□□□□ 0.36
SNAP29-201ENST00000215730 TTC22Q5TAA0 569 aa17.3■□□□□ 0.36
SNAP29-201ENST00000215730 NOL8Q76FK4 1167 aaKnown RBP17.3■□□□□ 0.36
SNAP29-201ENST00000215730 ZMYND15Q9H091 742 aa17.3■□□□□ 0.36
SNAP29-201ENST00000215730 RBM10P98175 930 aaKnown RBP17.3■□□□□ 0.36
SNAP29-201ENST00000215730 PLEKHM2Q8IWE5 1019 aa17.3■□□□□ 0.36
SNAP29-201ENST00000215730 FAM13BQ9NYF5 915 aa17.3■□□□□ 0.36
SNAP29-201ENST00000215730 TULP4Q9NRJ4 1543 aa17.3■□□□□ 0.36
SNAP29-201ENST00000215730 PTPRUQ92729 1446 aa17.29■□□□□ 0.36
SNAP29-201ENST00000215730 TRAPPC3LQ5T215 181 aa17.29■□□□□ 0.36
SNAP29-201ENST00000215730 C16orf71Q8IYS4 520 aaPredicted RBP17.29■□□□□ 0.36
SNAP29-201ENST00000215730 SLC39A6Q13433 755 aa17.29■□□□□ 0.36
SNAP29-201ENST00000215730 TPRNQ4KMQ1 711 aa17.29■□□□□ 0.36
SNAP29-201ENST00000215730 ADGRB1O14514 1584 aa17.29■□□□□ 0.36
SNAP29-201ENST00000215730 PPP1R9BQ96SB3 815 aa17.29■□□□□ 0.36
SNAP29-201ENST00000215730 PARP3Q9Y6F1 533 aa17.29■□□□□ 0.36
SNAP29-201ENST00000215730 GSPT1P15170 499 aaKnown RBP17.28■□□□□ 0.36
SNAP29-201ENST00000215730 SIRT2Q8IXJ6 389 aa17.28■□□□□ 0.36
SNAP29-201ENST00000215730 USP32Q8NFA0 1604 aa17.28■□□□□ 0.36
SNAP29-201ENST00000215730 SMARCA5O60264 1052 aaPredicted RBP17.28■□□□□ 0.36
SNAP29-201ENST00000215730 DNTTIP2Q5QJE6 756 aaKnown RBP17.28■□□□□ 0.36
SNAP29-201ENST00000215730 C8orf58Q8NAV2 365 aa17.28■□□□□ 0.36
SNAP29-201ENST00000215730 WWC3Q9ULE0 1092 aa17.28■□□□□ 0.36
SNAP29-201ENST00000215730 ARID3AQ99856 593 aa17.28■□□□□ 0.36
SNAP29-201ENST00000215730 RBM27Q9P2N5 1060 aaKnown RBP17.28■□□□□ 0.36
SNAP29-201ENST00000215730 ADAMTSL3P82987 1691 aa17.28■□□□□ 0.36
SNAP29-201ENST00000215730 LRRC7Q96NW7 1537 aa17.28■□□□□ 0.36
SNAP29-201ENST00000215730 HMMRO75330 724 aa17.27■□□□□ 0.36
SNAP29-201ENST00000215730 SNRPA1P09661 255 aaKnown RBP17.27■□□□□ 0.36
SNAP29-201ENST00000215730 MCCP23508 829 aa17.27■□□□□ 0.36
SNAP29-201ENST00000215730 RNF214Q8ND24 703 aa17.27■□□□□ 0.36
SNAP29-201ENST00000215730 ZNF219Q9P2Y4 722 aaPredicted RBP17.27■□□□□ 0.35
SNAP29-201ENST00000215730 ERBB3P21860 1342 aa17.27■□□□□ 0.35
SNAP29-201ENST00000215730 FLAD1Q8NFF5 587 aa17.26■□□□□ 0.35
SNAP29-201ENST00000215730 ZNF622Q969S3 477 aaKnown RBP eCLIP17.26■□□□□ 0.351e-14■□□□□ 9.2
SNAP29-201ENST00000215730 OFD1O75665 1012 aa17.26■□□□□ 0.35
SNAP29-201ENST00000215730 BRPF1P55201 1214 aaPredicted RBP17.26■□□□□ 0.35
SNAP29-201ENST00000215730 USP26Q9BXU7 913 aa17.26■□□□□ 0.35
SNAP29-201ENST00000215730 PDCL3Q9H2J4 239 aa17.26■□□□□ 0.35
SNAP29-201ENST00000215730 MROH1Q8NDA8 1641 aa17.26■□□□□ 0.35
SNAP29-201ENST00000215730 DCTPP1Q9H773 170 aa17.26■□□□□ 0.35
SNAP29-201ENST00000215730 ABCC4O15439 1325 aa17.25■□□□□ 0.35
SNAP29-201ENST00000215730 FOXD4L6Q3SYB3 417 aaPredicted RBP17.25■□□□□ 0.35
SNAP29-201ENST00000215730 FOXD4L3Q6VB84 417 aaPredicted RBP17.25■□□□□ 0.35
SNAP29-201ENST00000215730 NEK4P51957 841 aa17.25■□□□□ 0.35
SNAP29-201ENST00000215730 ZGPATQ8N5A5 531 aaKnown RBP17.25■□□□□ 0.35
SNAP29-201ENST00000215730 SYCE3A1L190 88 aa17.25■□□□□ 0.35
SNAP29-201ENST00000215730 ZNF445P59923 1031 aa17.25■□□□□ 0.35
SNAP29-201ENST00000215730 SDSP20132 328 aa17.24■□□□□ 0.35
SNAP29-201ENST00000215730 GPR162Q16538 588 aa17.24■□□□□ 0.35
SNAP29-201ENST00000215730 RPAP2Q8IXW5 612 aaPredicted RBP17.24■□□□□ 0.35
SNAP29-201ENST00000215730 ERC2O15083 957 aa17.24■□□□□ 0.35
SNAP29-201ENST00000215730 HSP90AB3PQ58FF7 597 aa17.24■□□□□ 0.35
SNAP29-201ENST00000215730 OTUD7AQ8TE49 926 aaPredicted RBP17.24■□□□□ 0.35
SNAP29-201ENST00000215730 RBSNQ9H1K0 784 aa17.24■□□□□ 0.35
SNAP29-201ENST00000215730 LMBRD1Q9NUN5 540 aa17.24■□□□□ 0.35
SNAP29-201ENST00000215730 IFT172Q9UG01 1749 aa17.24■□□□□ 0.35
SNAP29-201ENST00000215730 PKP1Q13835 747 aa17.24■□□□□ 0.35
SNAP29-201ENST00000215730 SYAP1Q96A49 352 aaPredicted RBP17.24■□□□□ 0.35
SNAP29-201ENST00000215730 SETDB2Q96T68 719 aa17.24■□□□□ 0.35
SNAP29-201ENST00000215730 NBPF5PQ86XG9 351 aaPredicted RBP17.23■□□□□ 0.35
SNAP29-201ENST00000215730 EN1Q05925 392 aaPredicted RBP17.23■□□□□ 0.35
SNAP29-201ENST00000215730 DIP2AQ14689 1571 aa17.23■□□□□ 0.35
SNAP29-201ENST00000215730 NEXMIFQ5QGS0 1516 aa17.23■□□□□ 0.35
SNAP29-201ENST00000215730 TRIM6-TRIM34B2RNG4 842 aa17.22■□□□□ 0.35
SNAP29-201ENST00000215730 CSPP1Q1MSJ5 1256 aa17.22■□□□□ 0.35
SNAP29-201ENST00000215730 RPGRQ92834 1020 aaKnown RBP17.22■□□□□ 0.35
SNAP29-201ENST00000215730 MST1RQ04912 1400 aa17.22■□□□□ 0.35
SNAP29-201ENST00000215730 ST5P78524 1137 aa17.22■□□□□ 0.35
SNAP29-201ENST00000215730 CCDC39Q9UFE4 941 aa17.22■□□□□ 0.35
SNAP29-201ENST00000215730 PNPLA6Q8IY17 1366 aa17.22■□□□□ 0.35
SNAP29-201ENST00000215730 IBTKQ9P2D0 1353 aaPredicted RBP17.22■□□□□ 0.35
SNAP29-201ENST00000215730 MBD3O95983 291 aa17.22■□□□□ 0.35
SNAP29-201ENST00000215730 SLC4A2P04920 1241 aa17.22■□□□□ 0.35
SNAP29-201ENST00000215730 MTHFSDQ2M296 383 aaKnown RBP17.22■□□□□ 0.35
SNAP29-201ENST00000215730 ANKRD44Q8N8A2 993 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms