RNA–Protein interactions for RNA: ENST00000181839.8

CDK13-201, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDK13, Length 7,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-201ENST00000181839 SLF2Q8IX21 1173 aa20.82■□□□□ 0.92
CDK13-201ENST00000181839 RRBP1Q9P2E9 1410 aaKnown RBP20.82■□□□□ 0.92
CDK13-201ENST00000181839 SLC12A7Q9Y666 1083 aa20.82■□□□□ 0.92
CDK13-201ENST00000181839 TSNARE1Q96NA8 513 aa20.82■□□□□ 0.92
CDK13-201ENST00000181839 RAPGEF3O95398 923 aa20.81■□□□□ 0.92
CDK13-201ENST00000181839 ATF7IPQ6VMQ6 1270 aa20.81■□□□□ 0.92
CDK13-201ENST00000181839 TICAM2Q86XR7 235 aa20.81■□□□□ 0.92
CDK13-201ENST00000181839 SIRT1Q96EB6 747 aa20.81■□□□□ 0.92
CDK13-201ENST00000181839 ARHGAP29Q52LW3 1261 aa20.81■□□□□ 0.92
CDK13-201ENST00000181839 MAP3K12Q12852 859 aa20.81■□□□□ 0.92
CDK13-201ENST00000181839 ISM2Q6H9L7 571 aa20.81■□□□□ 0.92
CDK13-201ENST00000181839 UQCRHP07919 91 aa20.81■□□□□ 0.92
CDK13-201ENST00000181839 ZBTB3Q9H5J0 574 aa20.8■□□□□ 0.92
CDK13-201ENST00000181839 GIGYF2Q6Y7W6 1299 aaKnown RBP20.8■□□□□ 0.92
CDK13-201ENST00000181839 LUZP1Q86V48 1076 aa20.8■□□□□ 0.92
CDK13-201ENST00000181839 IQCA1Q86XH1 822 aa20.8■□□□□ 0.92
CDK13-201ENST00000181839 GJA3Q9Y6H8 435 aa20.8■□□□□ 0.92
CDK13-201ENST00000181839 SSRP1Q08945 709 aaKnown RBP20.8■□□□□ 0.92
CDK13-201ENST00000181839 CCT2P78371 535 aaKnown RBP20.8■□□□□ 0.92
CDK13-201ENST00000181839 PPM1EQ8WY54 764 aa20.8■□□□□ 0.92
CDK13-201ENST00000181839 CCDC8Q9H0W5 538 aaPredicted RBP20.8■□□□□ 0.92
CDK13-201ENST00000181839 NUP88Q99567 741 aaPredicted RBP20.79■□□□□ 0.92
CDK13-201ENST00000181839 ZBTB21Q9ULJ3 1066 aa20.79■□□□□ 0.92
CDK13-201ENST00000181839 SP4Q02446 784 aa20.79■□□□□ 0.92
CDK13-201ENST00000181839 CCDC83Q8IWF9 413 aa20.79■□□□□ 0.92
CDK13-201ENST00000181839 GJC1P36383 396 aa20.79■□□□□ 0.92
CDK13-201ENST00000181839 EXOC6BQ9Y2D4 811 aa20.79■□□□□ 0.92
CDK13-201ENST00000181839 EIF3JO75822 258 aaKnown RBP20.79■□□□□ 0.92
CDK13-201ENST00000181839 ANKRD18BA2A2Z9 1011 aa20.78■□□□□ 0.92
CDK13-201ENST00000181839 IFIT3O14879 490 aaKnown RBP20.78■□□□□ 0.92
CDK13-201ENST00000181839 HLA-DOAP06340 250 aa20.78■□□□□ 0.92
CDK13-201ENST00000181839 MCM2P49736 904 aa20.78■□□□□ 0.92
CDK13-201ENST00000181839 PHACTR2O75167 634 aa20.78■□□□□ 0.92
CDK13-201ENST00000181839 NOP2P46087 812 aaKnown RBP20.78■□□□□ 0.92
CDK13-201ENST00000181839 UBAP1LF5GYI3 381 aa20.78■□□□□ 0.92
CDK13-201ENST00000181839 FANCD2Q9BXW9 1451 aa20.78■□□□□ 0.92
CDK13-201ENST00000181839 FERMT3Q86UX7 667 aa20.78■□□□□ 0.92
CDK13-201ENST00000181839 ZNF213O14771 459 aa20.77■□□□□ 0.92
CDK13-201ENST00000181839 ERLIN1O75477 346 aa20.77■□□□□ 0.92
CDK13-201ENST00000181839 CASQ1P31415 396 aa20.77■□□□□ 0.92
CDK13-201ENST00000181839 CATIPQ7Z7H3 387 aa20.77■□□□□ 0.92
CDK13-201ENST00000181839 ZNF692Q9BU19 519 aaPredicted RBP20.77■□□□□ 0.92
CDK13-201ENST00000181839 TSPY2A6NKD2 308 aa20.77■□□□□ 0.92
CDK13-201ENST00000181839 VPS36Q86VN1 386 aa20.77■□□□□ 0.92
CDK13-201ENST00000181839 CCDC194A0A1B0GVG4 234 aa20.77■□□□□ 0.91
CDK13-201ENST00000181839 FOXO3O43524 673 aa20.76■□□□□ 0.91
CDK13-201ENST00000181839 NUP62CLQ9H1M0 184 aa20.76■□□□□ 0.91
CDK13-201ENST00000181839 FYCO1Q9BQS8 1478 aa20.76■□□□□ 0.91
CDK13-201ENST00000181839 ATXN8OSP0DMR3 200 aa20.76■□□□□ 0.91
CDK13-201ENST00000181839 PPP1R14CQ8TAE6 165 aa20.76■□□□□ 0.91
CDK13-201ENST00000181839 PANK2Q9BZ23 570 aa20.76■□□□□ 0.91
CDK13-201ENST00000181839 RAB34Q9BZG1 259 aa20.76■□□□□ 0.91
CDK13-201ENST00000181839 ZWINTO95229 277 aa20.75■□□□□ 0.91
CDK13-201ENST00000181839 GCC1Q96CN9 775 aa20.75■□□□□ 0.91
CDK13-201ENST00000181839 MBD3O95983 291 aa20.75■□□□□ 0.91
CDK13-201ENST00000181839 IDEP14735 1019 aa20.75■□□□□ 0.91
CDK13-201ENST00000181839 BIRC2Q13490 618 aa20.75■□□□□ 0.91
CDK13-201ENST00000181839 WAPLQ7Z5K2 1190 aa20.75■□□□□ 0.91
CDK13-201ENST00000181839 RAB3IL1Q8TBN0 382 aa20.75■□□□□ 0.91
CDK13-201ENST00000181839 KAT14Q9H8E8 782 aa20.75■□□□□ 0.91
CDK13-201ENST00000181839 IQSEC3Q9UPP2 1182 aaPredicted RBP20.75■□□□□ 0.91
CDK13-201ENST00000181839 WDR33Q9C0J8 1336 aaKnown RBP20.75■□□□□ 0.91
CDK13-201ENST00000181839 TMEM110-MUSTN1A8MSY1 372 aa20.75■□□□□ 0.91
CDK13-201ENST00000181839 SMTNL1A8MU46 457 aa20.75■□□□□ 0.91
CDK13-201ENST00000181839 RIMBP2O15034 1052 aa20.75■□□□□ 0.91
CDK13-201ENST00000181839 BEGAINQ9BUH8 593 aa20.75■□□□□ 0.91
CDK13-201ENST00000181839 U3KPZ7 1027 aaPredicted RBP20.75■□□□□ 0.91
CDK13-201ENST00000181839 NBPF6Q5VWK0 638 aa20.74■□□□□ 0.91
CDK13-201ENST00000181839 NBPF5PQ86XG9 351 aaPredicted RBP20.74■□□□□ 0.91
CDK13-201ENST00000181839 NBPF4Q96M43 638 aa20.74■□□□□ 0.91
CDK13-201ENST00000181839 CCDC40Q4G0X9 1142 aa20.74■□□□□ 0.91
CDK13-201ENST00000181839 GIMAP7Q8NHV1 300 aa20.74■□□□□ 0.91
CDK13-201ENST00000181839 PAIP2Q9BPZ3 127 aaKnown RBP20.74■□□□□ 0.91
CDK13-201ENST00000181839 FERMT1Q9BQL6 677 aa20.74■□□□□ 0.91
CDK13-201ENST00000181839 MTIF2P46199 727 aaKnown RBP20.74■□□□□ 0.91
CDK13-201ENST00000181839 PRPF40BQ6NWY9 871 aaKnown RBP20.74■□□□□ 0.91
CDK13-201ENST00000181839 CCDC174Q6PII3 467 aa20.74■□□□□ 0.91
CDK13-201ENST00000181839 THUMPD2Q9BTF0 503 aaKnown RBP20.74■□□□□ 0.91
CDK13-201ENST00000181839 ATP5J2-PTCD1G3V325 749 aa20.73■□□□□ 0.91
CDK13-201ENST00000181839 CALML4Q96GE6 196 aa20.73■□□□□ 0.91
CDK13-201ENST00000181839 A0A087WZG4 1122 aa20.73■□□□□ 0.91
CDK13-201ENST00000181839 UQCRHLA0A096LP55 91 aa20.73■□□□□ 0.91
CDK13-201ENST00000181839 PPP2R1AP30153 589 aa20.73■□□□□ 0.91
CDK13-201ENST00000181839 GOLGA8AA7E2F4 631 aa20.72■□□□□ 0.91
CDK13-201ENST00000181839 GOLGA8BA8MQT2 603 aa20.72■□□□□ 0.91
CDK13-201ENST00000181839 HAND2P61296 217 aa20.72■□□□□ 0.91
CDK13-201ENST00000181839 SNRKQ9NRH2 765 aa20.72■□□□□ 0.91
CDK13-201ENST00000181839 POLD1P28340 1107 aa20.72■□□□□ 0.91
CDK13-201ENST00000181839 HLTFQ14527 1009 aaKnown RBP eCLIP20.72■□□□□ 0.91
CDK13-201ENST00000181839 TMCO3Q6UWJ1 677 aa20.72■□□□□ 0.91
CDK13-201ENST00000181839 OGFOD1Q8N543 542 aa20.72■□□□□ 0.91
CDK13-201ENST00000181839 LMOD1P29536 600 aaPredicted RBP20.72■□□□□ 0.91
CDK13-201ENST00000181839 HDAC9Q9UKV0 1011 aa20.72■□□□□ 0.91
CDK13-201ENST00000181839 CALM1P0DP23 149 aa20.71■□□□□ 0.91
CDK13-201ENST00000181839 CALM2P0DP24 149 aa20.71■□□□□ 0.91
CDK13-201ENST00000181839 CALM3P0DP25 149 aa20.71■□□□□ 0.91
CDK13-201ENST00000181839 HMGB2P26583 209 aaKnown RBP20.71■□□□□ 0.91
CDK13-201ENST00000181839 CETN1Q12798 172 aa20.71■□□□□ 0.91
CDK13-201ENST00000181839 GCOM1H8Y6P7 765 aaPredicted RBP20.71■□□□□ 0.91
CDK13-201ENST00000181839 MYZAPP0CAP1 466 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms