RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 SLC8A3P57103 927 aa3.98□□□□□ -1.77
NEB-201ENST00000172853 RRBP1Q9P2E9 1410 aaKnown RBP3.98□□□□□ -1.77
NEB-201ENST00000172853 NACA2Q9H009 215 aa3.98□□□□□ -1.77
NEB-201ENST00000172853 CLIP2Q9UDT6 1046 aa3.98□□□□□ -1.77
NEB-201ENST00000172853 ZBTB9Q96C00 473 aa3.98□□□□□ -1.77
NEB-201ENST00000172853 CGNQ9P2M7 1197 aaKnown RBP3.98□□□□□ -1.77
NEB-201ENST00000172853 PHAXQ9H814 394 aaKnown RBP3.98□□□□□ -1.77
NEB-201ENST00000172853 PUF60Q9UHX1 559 aaKnown RBP3.98□□□□□ -1.77
NEB-201ENST00000172853 KIF4BQ2VIQ3 1234 aa3.98□□□□□ -1.77
NEB-201ENST00000172853 CFAP58Q5T655 872 aa3.98□□□□□ -1.77
NEB-201ENST00000172853 PLVAPQ9BX97 442 aa3.98□□□□□ -1.77
NEB-201ENST00000172853 UBA5Q9GZZ9 404 aa3.98□□□□□ -1.77
NEB-201ENST00000172853 DDX19BQ9UMR2 479 aa3.98□□□□□ -1.77
NEB-201ENST00000172853 IFIT1P09914 478 aaKnown RBP3.98□□□□□ -1.77
NEB-201ENST00000172853 UBE4AQ14139 1066 aa3.98□□□□□ -1.77
NEB-201ENST00000172853 MAP7Q14244 749 aa3.98□□□□□ -1.77
NEB-201ENST00000172853 PLS1Q14651 629 aa3.98□□□□□ -1.77
NEB-201ENST00000172853 FAM114A1Q8IWE2 563 aa3.98□□□□□ -1.77
NEB-201ENST00000172853 ZRANB1Q9UGI0 708 aa3.98□□□□□ -1.77
NEB-201ENST00000172853 PNMA2Q9UL42 364 aa3.98□□□□□ -1.77
NEB-201ENST00000172853 AKAP2Q9Y2D5 859 aa3.98□□□□□ -1.77
NEB-201ENST00000172853 BICRAQ9NZM4 1560 aa3.98□□□□□ -1.77
NEB-201ENST00000172853 KIAA1328Q86T90 577 aa3.98□□□□□ -1.77
NEB-201ENST00000172853 PHACTR2O75167 634 aa3.98□□□□□ -1.77
NEB-201ENST00000172853 EXOC4Q96A65 974 aa3.98□□□□□ -1.77
NEB-201ENST00000172853 NUCB1Q02818 461 aa3.98□□□□□ -1.77
NEB-201ENST00000172853 ZNF449Q6P9G9 518 aa3.98□□□□□ -1.77
NEB-201ENST00000172853 TXNDC2Q86VQ3 553 aa3.98□□□□□ -1.77
NEB-201ENST00000172853 NSMCE1Q8WV22 266 aa3.98□□□□□ -1.77
NEB-201ENST00000172853 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.98□□□□□ -1.77
NEB-201ENST00000172853 SYCP3Q8IZU3 236 aa3.97□□□□□ -1.77
NEB-201ENST00000172853 CCDC148Q8NFR7 591 aa3.97□□□□□ -1.77
NEB-201ENST00000172853 CEP126Q9P2H0 1117 aa3.97□□□□□ -1.77
NEB-201ENST00000172853 LRRFIP2Q9Y608 721 aaKnown RBP3.97□□□□□ -1.77
NEB-201ENST00000172853 CD2APQ9Y5K6 639 aa3.97□□□□□ -1.77
NEB-201ENST00000172853 GIPC1O14908 333 aa3.97□□□□□ -1.77
NEB-201ENST00000172853 GSTO1P78417 241 aa3.97□□□□□ -1.77
NEB-201ENST00000172853 PSMC4P43686 418 aa3.97□□□□□ -1.77
NEB-201ENST00000172853 NUP155O75694 1391 aa3.97□□□□□ -1.77
NEB-201ENST00000172853 IMPG2Q9BZV3 1241 aa3.97□□□□□ -1.77
NEB-201ENST00000172853 ANKFY1Q9P2R3 1169 aa3.97□□□□□ -1.77
NEB-201ENST00000172853 MAP3K7O43318 606 aa3.97□□□□□ -1.77
NEB-201ENST00000172853 IQCGQ9H095 443 aaKnown RBP3.97□□□□□ -1.77
NEB-201ENST00000172853 MACROD2A1Z1Q3 448 aa3.97□□□□□ -1.77
NEB-201ENST00000172853 CRCPO75575 148 aa3.97□□□□□ -1.77
NEB-201ENST00000172853 SIRT1Q96EB6 747 aa3.97□□□□□ -1.77
NEB-201ENST00000172853 DAPK3O43293 454 aa3.97□□□□□ -1.77
NEB-201ENST00000172853 ZBTB16Q05516 673 aa3.97□□□□□ -1.77
NEB-201ENST00000172853 CLUAP1Q96AJ1 413 aa3.97□□□□□ -1.77
NEB-201ENST00000172853 CALML4Q96GE6 196 aa3.97□□□□□ -1.77
NEB-201ENST00000172853 TTC36A6NLP5 189 aa3.97□□□□□ -1.77
NEB-201ENST00000172853 SYCE3A1L190 88 aa3.97□□□□□ -1.77
NEB-201ENST00000172853 SLC17A8Q8NDX2 589 aa3.97□□□□□ -1.77
NEB-201ENST00000172853 CCDC113Q9H0I3 377 aa3.97□□□□□ -1.77
NEB-201ENST00000172853 LRPPRCP42704 1394 aaKnown RBP3.97□□□□□ -1.77
NEB-201ENST00000172853 MCM3P25205 808 aa3.97□□□□□ -1.77
NEB-201ENST00000172853 TMOD4Q9NZQ9 345 aa3.97□□□□□ -1.77
NEB-201ENST00000172853 AMPD3Q01432 767 aa3.97□□□□□ -1.77
NEB-201ENST00000172853 CTCFLQ8NI51 663 aaPredicted RBP3.97□□□□□ -1.77
NEB-201ENST00000172853 TRERF1Q96PN7 1200 aa3.97□□□□□ -1.77
NEB-201ENST00000172853 CEP83Q9Y592 693 aa3.97□□□□□ -1.77
NEB-201ENST00000172853 TXNDC16Q9P2K2 825 aa3.97□□□□□ -1.77
NEB-201ENST00000172853 SPA17Q15506 151 aa3.97□□□□□ -1.77
NEB-201ENST00000172853 TAF3Q5VWG9 929 aa3.97□□□□□ -1.77
NEB-201ENST00000172853 MCM10Q7L590 875 aa3.96□□□□□ -1.77
NEB-201ENST00000172853 GPR162Q16538 588 aa3.96□□□□□ -1.77
NEB-201ENST00000172853 STK32BQ9NY57 414 aa3.96□□□□□ -1.77
NEB-201ENST00000172853 TMOD3Q9NYL9 352 aa3.96□□□□□ -1.77
NEB-201ENST00000172853 FAM169AQ9Y6X4 670 aa3.96□□□□□ -1.77
NEB-201ENST00000172853 WDR46O15213 610 aaKnown RBP3.96□□□□□ -1.77
NEB-201ENST00000172853 GLRX3O76003 335 aaKnown RBP3.96□□□□□ -1.77
NEB-201ENST00000172853 EIF6P56537 245 aaKnown RBP3.96□□□□□ -1.77
NEB-201ENST00000172853 PPFIBP2Q8ND30 876 aa3.96□□□□□ -1.77
NEB-201ENST00000172853 GOPCQ9HD26 462 aa3.96□□□□□ -1.77
NEB-201ENST00000172853 IVNS1ABPQ9Y6Y0 642 aa3.96□□□□□ -1.77
NEB-201ENST00000172853 DISP3Q9P2K9 1392 aa3.96□□□□□ -1.78
NEB-201ENST00000172853 PARP3Q9Y6F1 533 aa3.96□□□□□ -1.78
NEB-201ENST00000172853 POLR3GO15318 223 aaPredicted RBP3.96□□□□□ -1.78
NEB-201ENST00000172853 PDE6AP16499 860 aa3.96□□□□□ -1.78
NEB-201ENST00000172853 GABPAQ06546 454 aa3.96□□□□□ -1.78
NEB-201ENST00000172853 SEPT8Q92599 483 aa3.96□□□□□ -1.78
NEB-201ENST00000172853 CCDC144CPQ8IYA2 1237 aa3.96□□□□□ -1.78
NEB-201ENST00000172853 RIPK4P57078 832 aa3.96□□□□□ -1.78
NEB-201ENST00000172853 IFFO1Q0D2I5 559 aa3.96□□□□□ -1.78
NEB-201ENST00000172853 NAA15Q9BXJ9 866 aaKnown RBP3.96□□□□□ -1.78
NEB-201ENST00000172853 TMCO5BA8MYB1 307 aa3.96□□□□□ -1.78
NEB-201ENST00000172853 USO1O60763 962 aaKnown RBP3.96□□□□□ -1.78
NEB-201ENST00000172853 TEX13AQ9BXU3 409 aaPredicted RBP3.96□□□□□ -1.78
NEB-201ENST00000172853 CCDC196A0A1B0GTZ2 297 aa3.96□□□□□ -1.78
NEB-201ENST00000172853 RRP1P56182 461 aaKnown RBP3.96□□□□□ -1.78
NEB-201ENST00000172853 ABCF2Q9UG63 623 aa3.96□□□□□ -1.78
NEB-201ENST00000172853 ST20-MTHFSA0A0A6YYL1 179 aa3.96□□□□□ -1.78
NEB-201ENST00000172853 EIF4E1BA6NMX2 242 aaKnown RBP3.96□□□□□ -1.78
NEB-201ENST00000172853 EXOC5O00471 708 aa3.96□□□□□ -1.78
NEB-201ENST00000172853 MTHFSP49914 203 aa3.96□□□□□ -1.78
NEB-201ENST00000172853 NAP1L3Q99457 506 aaPredicted RBP3.96□□□□□ -1.78
NEB-201ENST00000172853 ZNF408Q9H9D4 720 aa3.96□□□□□ -1.78
NEB-201ENST00000172853 FKBP4Q02790 459 aaKnown RBP eCLIP3.96□□□□□ -1.78
NEB-201ENST00000172853 DNAAF4Q8WXU2 420 aa3.96□□□□□ -1.78
NEB-201ENST00000172853 MCM2P49736 904 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms