RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 GOLGA6L6A8MZA4 724 aa24.03■■□□□ 1.44
PPP1R3F-201ENST00000055335 LETM1O95202 739 aaPredicted RBP24.03■■□□□ 1.44
PPP1R3F-201ENST00000055335 NAA30Q147X3 362 aaPredicted RBP24.03■■□□□ 1.44
PPP1R3F-201ENST00000055335 WASLO00401 505 aaPredicted RBP24.03■■□□□ 1.44
PPP1R3F-201ENST00000055335 GNAI3P08754 354 aa24.03■■□□□ 1.44
PPP1R3F-201ENST00000055335 UBTFL1P0CB47 393 aaPredicted RBP24.03■■□□□ 1.44
PPP1R3F-201ENST00000055335 HSPA4P34932 840 aa24.03■■□□□ 1.44
PPP1R3F-201ENST00000055335 ATP6V1DQ9Y5K8 247 aa24.03■■□□□ 1.44
PPP1R3F-201ENST00000055335 NEXMIFQ5QGS0 1516 aa24.02■■□□□ 1.44
PPP1R3F-201ENST00000055335 CCDC186Q7Z3E2 898 aa24.02■■□□□ 1.44
PPP1R3F-201ENST00000055335 TCEANC2Q96MN5 208 aa24.02■■□□□ 1.44
PPP1R3F-201ENST00000055335 JAKMIP1Q96N16 626 aaKnown RBP24.02■■□□□ 1.44
PPP1R3F-201ENST00000055335 RPAP1Q9BWH6 1393 aaPredicted RBP24.02■■□□□ 1.44
PPP1R3F-201ENST00000055335 CCDC192P0DO97 292 aa24.01■■□□□ 1.43
PPP1R3F-201ENST00000055335 ATP8B2P98198 1209 aa24.01■■□□□ 1.43
PPP1R3F-201ENST00000055335 MAP2P11137 1827 aaKnown RBP24.01■■□□□ 1.43
PPP1R3F-201ENST00000055335 TRIM5Q9C035 493 aa24.01■■□□□ 1.43
PPP1R3F-201ENST00000055335 TFIP11Q9UBB9 837 aaKnown RBP24.01■■□□□ 1.43
PPP1R3F-201ENST00000055335 LMTK2Q8IWU2 1503 aa24.01■■□□□ 1.43
PPP1R3F-201ENST00000055335 EIF2S2P20042 333 aaKnown RBP24■■□□□ 1.43
PPP1R3F-201ENST00000055335 MTHFSDQ2M296 383 aaKnown RBP24■■□□□ 1.43
PPP1R3F-201ENST00000055335 PRPF40BQ6NWY9 871 aaKnown RBP24■■□□□ 1.43
PPP1R3F-201ENST00000055335 NRBP1Q9UHY1 535 aa24■■□□□ 1.43
PPP1R3F-201ENST00000055335 REREQ9P2R6 1566 aa24■■□□□ 1.43
PPP1R3F-201ENST00000055335 ARAP3Q8WWN8 1544 aa24■■□□□ 1.43
PPP1R3F-201ENST00000055335 CCDC61Q9Y6R9 512 aa24■■□□□ 1.43
PPP1R3F-201ENST00000055335 SPTLC3Q9NUV7 552 aa23.99■■□□□ 1.43
PPP1R3F-201ENST00000055335 SRGAP3O43295 1099 aa23.98■■□□□ 1.43
PPP1R3F-201ENST00000055335 PPP1R42Q7Z4L9 355 aa23.98■■□□□ 1.43
PPP1R3F-201ENST00000055335 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.97■■□□□ 1.43
PPP1R3F-201ENST00000055335 V9GYY5 206 aaPredicted RBP23.97■■□□□ 1.43
PPP1R3F-201ENST00000055335 NPHP1O15259 732 aa23.97■■□□□ 1.43
PPP1R3F-201ENST00000055335 GTF2F1P35269 517 aaKnown RBP eCLIP23.97■■□□□ 1.43
PPP1R3F-201ENST00000055335 LTV1Q96GA3 475 aaPredicted RBP23.97■■□□□ 1.43
PPP1R3F-201ENST00000055335 PDRG1Q9NUG6 133 aa23.97■■□□□ 1.43
PPP1R3F-201ENST00000055335 ABCA9Q8IUA7 1624 aa23.97■■□□□ 1.43
PPP1R3F-201ENST00000055335 ADCK5Q3MIX3 580 aa23.97■■□□□ 1.43
PPP1R3F-201ENST00000055335 LARP1BQ659C4 914 aaKnown RBP23.97■■□□□ 1.43
PPP1R3F-201ENST00000055335 UTP14CQ5TAP6 766 aaKnown RBP23.96■■□□□ 1.43
PPP1R3F-201ENST00000055335 STK3Q13188 491 aa23.96■■□□□ 1.43
PPP1R3F-201ENST00000055335 LIG1P18858 919 aa23.96■■□□□ 1.43
PPP1R3F-201ENST00000055335 SALL3Q9BXA9 1300 aa23.95■■□□□ 1.43
PPP1R3F-201ENST00000055335 SGSM2O43147 1006 aa23.95■■□□□ 1.42
PPP1R3F-201ENST00000055335 NUP62CLQ9H1M0 184 aa23.95■■□□□ 1.42
PPP1R3F-201ENST00000055335 CNTROBQ8N137 903 aa23.95■■□□□ 1.42
PPP1R3F-201ENST00000055335 FBXW7Q969H0 707 aa23.95■■□□□ 1.42
PPP1R3F-201ENST00000055335 TNNT1P13805 278 aa23.94■■□□□ 1.42
PPP1R3F-201ENST00000055335 MTMR6Q9Y217 621 aa23.94■■□□□ 1.42
PPP1R3F-201ENST00000055335 MAP3K11Q16584 847 aa23.94■■□□□ 1.42
PPP1R3F-201ENST00000055335 TPD52L1Q16890 204 aaPredicted RBP23.94■■□□□ 1.42
PPP1R3F-201ENST00000055335 GTPBP4Q9BZE4 634 aaKnown RBP23.94■■□□□ 1.42
PPP1R3F-201ENST00000055335 ANO6Q4KMQ2 910 aa23.94■■□□□ 1.42
PPP1R3F-201ENST00000055335 RHPN1Q8TCX5 695 aa23.94■■□□□ 1.42
PPP1R3F-201ENST00000055335 TNMDQ9H2S6 317 aa23.94■■□□□ 1.42
PPP1R3F-201ENST00000055335 PHAXQ9H814 394 aaKnown RBP23.94■■□□□ 1.42
PPP1R3F-201ENST00000055335 CGNQ9P2M7 1197 aaKnown RBP23.94■■□□□ 1.42
PPP1R3F-201ENST00000055335 RAD50Q92878 1312 aa23.94■■□□□ 1.42
PPP1R3F-201ENST00000055335 CCDC30Q5VVM6 783 aa23.93■■□□□ 1.42
PPP1R3F-201ENST00000055335 DACT1Q9NYF0 836 aa23.93■■□□□ 1.42
PPP1R3F-201ENST00000055335 USP44Q9H0E7 712 aa23.93■■□□□ 1.42
PPP1R3F-201ENST00000055335 CEBPZQ03701 1054 aaKnown RBP23.93■■□□□ 1.42
PPP1R3F-201ENST00000055335 TYRO3Q06418 890 aa23.93■■□□□ 1.42
PPP1R3F-201ENST00000055335 TMEM87AQ8NBN3 555 aa23.93■■□□□ 1.42
PPP1R3F-201ENST00000055335 FOSBP53539 338 aa23.92■■□□□ 1.42
PPP1R3F-201ENST00000055335 PTH1RQ03431 593 aa23.92■■□□□ 1.42
PPP1R3F-201ENST00000055335 YEATS2Q9ULM3 1422 aa23.92■■□□□ 1.42
PPP1R3F-201ENST00000055335 TTC6Q86TZ1 520 aa23.92■■□□□ 1.42
PPP1R3F-201ENST00000055335 KIAA0232Q92628 1395 aa23.91■■□□□ 1.42
PPP1R3F-201ENST00000055335 FAM200AQ8TCP9 573 aa23.91■■□□□ 1.42
PPP1R3F-201ENST00000055335 ANXA1P04083 346 aa23.91■■□□□ 1.42
PPP1R3F-201ENST00000055335 BICD2Q8TD16 824 aa23.91■■□□□ 1.42
PPP1R3F-201ENST00000055335 CPSF1Q10570 1443 aaKnown RBP23.91■■□□□ 1.42
PPP1R3F-201ENST00000055335 EDC4Q6P2E9 1401 aaKnown RBP23.91■■□□□ 1.42
PPP1R3F-201ENST00000055335 MAP3K19Q56UN5 1328 aa23.91■■□□□ 1.42
PPP1R3F-201ENST00000055335 TTC14Q96N46 770 aa23.91■■□□□ 1.42
PPP1R3F-201ENST00000055335 LSG1Q9H089 658 aaKnown RBP23.91■■□□□ 1.42
PPP1R3F-201ENST00000055335 STAP2Q9UGK3 403 aa23.91■■□□□ 1.42
PPP1R3F-201ENST00000055335 CYP46A1Q9Y6A2 500 aa23.91■■□□□ 1.42
PPP1R3F-201ENST00000055335 FUCA2Q9BTY2 467 aa23.9■■□□□ 1.42
PPP1R3F-201ENST00000055335 AMPHP49418 695 aa23.9■■□□□ 1.42
PPP1R3F-201ENST00000055335 KRT85P78386 507 aa23.9■■□□□ 1.42
PPP1R3F-201ENST00000055335 NUTM2GQ5VZR2 741 aa23.9■■□□□ 1.42
PPP1R3F-201ENST00000055335 CDC37L1Q7L3B6 337 aa23.9■■□□□ 1.42
PPP1R3F-201ENST00000055335 HYPKQ9NX55 129 aa23.9■■□□□ 1.42
PPP1R3F-201ENST00000055335 ME3Q16798 604 aa23.89■■□□□ 1.42
PPP1R3F-201ENST00000055335 CCDC112Q8NEF3 446 aa23.89■■□□□ 1.42
PPP1R3F-201ENST00000055335 CDK12Q9NYV4 1490 aaPredicted RBP23.89■■□□□ 1.41
PPP1R3F-201ENST00000055335 SOS1Q07889 1333 aaPredicted RBP23.89■■□□□ 1.41
PPP1R3F-201ENST00000055335 NCBP1Q09161 790 aaKnown RBP23.88■■□□□ 1.41
PPP1R3F-201ENST00000055335 DNAJC25Q9H1X3 360 aa23.88■■□□□ 1.41
PPP1R3F-201ENST00000055335 CBX8Q9HC52 389 aa23.88■■□□□ 1.41
PPP1R3F-201ENST00000055335 TPM3P06753 285 aa23.88■■□□□ 1.41
PPP1R3F-201ENST00000055335 NBPF7P0C2Y1 421 aaPredicted RBP23.88■■□□□ 1.41
PPP1R3F-201ENST00000055335 HDGFL1Q5TGJ6 251 aa23.88■■□□□ 1.41
PPP1R3F-201ENST00000055335 FRMPD1Q5SYB0 1578 aa23.88■■□□□ 1.41
PPP1R3F-201ENST00000055335 TRMT1Q9NXH9 659 aaKnown RBP23.87■■□□□ 1.41
PPP1R3F-201ENST00000055335 MRVI1Q9Y6F6 885 aa23.87■■□□□ 1.41
PPP1R3F-201ENST00000055335 DLG5Q8TDM6 1919 aa23.87■■□□□ 1.41
PPP1R3F-201ENST00000055335 SIGLEC1Q9BZZ2 1709 aa23.87■■□□□ 1.41
PPP1R3F-201ENST00000055335 COL9A3Q14050 684 aaPredicted RBP23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms