RNA–Protein interactions for RNA: ENST00000053243.5

TNFRSF17-201, Transcript of TNF receptor superfamily member 17, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TNFRSF17, Length 994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17-201ENST00000053243 USP6P35125 1406 aa8.39□□□□□ -1.07
TNFRSF17-201ENST00000053243 SOWAHBA6NEL2 793 aa8.39□□□□□ -1.07
TNFRSF17-201ENST00000053243 E9PSI1 815 aa8.39□□□□□ -1.07
TNFRSF17-201ENST00000053243 SLFN5Q08AF3 891 aa8.39□□□□□ -1.07
TNFRSF17-201ENST00000053243 MYSM1Q5VVJ2 828 aa8.39□□□□□ -1.07
TNFRSF17-201ENST00000053243 DUSP27Q5VZP5 1158 aa8.39□□□□□ -1.07
TNFRSF17-201ENST00000053243 PROCA1Q8NCQ7 364 aaPredicted RBP8.39□□□□□ -1.07
TNFRSF17-201ENST00000053243 NUDT16Q96DE0 195 aaKnown RBP8.39□□□□□ -1.07
TNFRSF17-201ENST00000053243 CABP1Q9NZU7 370 aa8.39□□□□□ -1.07
TNFRSF17-201ENST00000053243 KIF1AQ12756 1690 aa8.39□□□□□ -1.07
TNFRSF17-201ENST00000053243 CEBPAP49715 358 aaPredicted RBP8.38□□□□□ -1.07
TNFRSF17-201ENST00000053243 THSD4Q6ZMP0 1018 aa8.38□□□□□ -1.07
TNFRSF17-201ENST00000053243 TBC1D2Q9BYX2 928 aa8.38□□□□□ -1.07
TNFRSF17-201ENST00000053243 PNNQ9H307 717 aaKnown RBP8.38□□□□□ -1.07
TNFRSF17-201ENST00000053243 PEAK1Q9H792 1746 aa8.37□□□□□ -1.07
TNFRSF17-201ENST00000053243 TTC21AQ8NDW8 1320 aa8.37□□□□□ -1.07
TNFRSF17-201ENST00000053243 PRR36Q9H6K5 1346 aa8.37□□□□□ -1.07
TNFRSF17-201ENST00000053243 WDR63Q8IWG1 891 aa8.37□□□□□ -1.07
TNFRSF17-201ENST00000053243 POLR3EQ9NVU0 708 aa8.37□□□□□ -1.07
TNFRSF17-201ENST00000053243 USP31Q70CQ4 1352 aa8.36□□□□□ -1.07
TNFRSF17-201ENST00000053243 LTN1O94822 1766 aa8.36□□□□□ -1.07
TNFRSF17-201ENST00000053243 DDX11L8A8MPP1 907 aa8.36□□□□□ -1.07
TNFRSF17-201ENST00000053243 APAF1O14727 1248 aa8.36□□□□□ -1.07
TNFRSF17-201ENST00000053243 SLF2Q8IX21 1173 aa8.36□□□□□ -1.07
TNFRSF17-201ENST00000053243 GGNBP2Q9H3C7 697 aa8.36□□□□□ -1.07
TNFRSF17-201ENST00000053243 HPS5Q9UPZ3 1129 aa8.36□□□□□ -1.07
TNFRSF17-201ENST00000053243 VIRMAQ69YN4 1812 aaKnown RBP8.36□□□□□ -1.07
TNFRSF17-201ENST00000053243 KIF24Q5T7B8 1368 aa8.35□□□□□ -1.07
TNFRSF17-201ENST00000053243 IL16Q14005 1332 aa8.35□□□□□ -1.07
TNFRSF17-201ENST00000053243 SULF1Q8IWU6 871 aa8.35□□□□□ -1.07
TNFRSF17-201ENST00000053243 WWC1Q8IX03 1113 aa8.35□□□□□ -1.07
TNFRSF17-201ENST00000053243 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.35□□□□□ -1.07
TNFRSF17-201ENST00000053243 SPIRE2Q8WWL2 714 aa8.35□□□□□ -1.07
TNFRSF17-201ENST00000053243 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.35□□□□□ -1.07
TNFRSF17-201ENST00000053243 AMOTL2Q9Y2J4 779 aa8.35□□□□□ -1.07
TNFRSF17-201ENST00000053243 ADGRL3Q9HAR2 1447 aa8.35□□□□□ -1.07
TNFRSF17-201ENST00000053243 DIAPH1O60610 1272 aaKnown RBP8.34□□□□□ -1.07
TNFRSF17-201ENST00000053243 CT47B1P0C2W7 299 aaPredicted RBP8.34□□□□□ -1.07
TNFRSF17-201ENST00000053243 SLC4A3P48751 1232 aa8.34□□□□□ -1.07
TNFRSF17-201ENST00000053243 PTPN5P54829 565 aa8.34□□□□□ -1.07
TNFRSF17-201ENST00000053243 CCDC146Q8IYE0 955 aa8.34□□□□□ -1.07
TNFRSF17-201ENST00000053243 TCP11L2Q8N4U5 519 aa8.34□□□□□ -1.07
TNFRSF17-201ENST00000053243 PLEKHF1Q96S99 279 aa8.34□□□□□ -1.07
TNFRSF17-201ENST00000053243 NPHP4O75161 1426 aaPredicted RBP8.34□□□□□ -1.07
TNFRSF17-201ENST00000053243 TRPM3Q9HCF6 1732 aaPredicted RBP8.34□□□□□ -1.07
TNFRSF17-201ENST00000053243 CLK2P49760 499 aaKnown RBP8.33□□□□□ -1.08
TNFRSF17-201ENST00000053243 IRX6P78412 446 aaPredicted RBP8.33□□□□□ -1.08
TNFRSF17-201ENST00000053243 ANKLE2Q86XL3 938 aa8.33□□□□□ -1.08
TNFRSF17-201ENST00000053243 RDH13Q8NBN7 331 aa8.33□□□□□ -1.08
TNFRSF17-201ENST00000053243 SLC26A8Q96RN1 970 aa8.33□□□□□ -1.08
TNFRSF17-201ENST00000053243 WBP1LQ9NX94 342 aa8.33□□□□□ -1.08
TNFRSF17-201ENST00000053243 POLKQ9UBT6 870 aa8.33□□□□□ -1.08
TNFRSF17-201ENST00000053243 LIMD1Q9UGP4 676 aa8.33□□□□□ -1.08
TNFRSF17-201ENST00000053243 TSR3Q9UJK0 312 aaKnown RBP8.33□□□□□ -1.08
TNFRSF17-201ENST00000053243 LRRC37A3O60309 1634 aa8.32□□□□□ -1.08
TNFRSF17-201ENST00000053243 TTC21BQ7Z4L5 1316 aa8.32□□□□□ -1.08
TNFRSF17-201ENST00000053243 SLC10A3P09131 477 aa8.32□□□□□ -1.08
TNFRSF17-201ENST00000053243 U2AF1L5P0DN76 240 aaPredicted RBP8.32□□□□□ -1.08
TNFRSF17-201ENST00000053243 TNNT2P45379 298 aaPredicted RBP8.32□□□□□ -1.08
TNFRSF17-201ENST00000053243 U2AF1Q01081 240 aaKnown RBP eCLIP8.32□□□□□ -1.08
TNFRSF17-201ENST00000053243 AAMPQ13685 434 aa8.32□□□□□ -1.08
TNFRSF17-201ENST00000053243 DIXDC1Q155Q3 683 aa8.32□□□□□ -1.08
TNFRSF17-201ENST00000053243 COG3Q96JB2 828 aa8.32□□□□□ -1.08
TNFRSF17-201ENST00000053243 SALL2Q9Y467 1007 aaPredicted RBP8.32□□□□□ -1.08
TNFRSF17-201ENST00000053243 CACNA1FO60840 1977 aa8.31□□□□□ -1.08
TNFRSF17-201ENST00000053243 ACEP12821 1306 aa8.31□□□□□ -1.08
TNFRSF17-201ENST00000053243 MAPK8IP3Q9UPT6 1336 aa8.31□□□□□ -1.08
TNFRSF17-201ENST00000053243 CAMTA1Q9Y6Y1 1673 aa8.31□□□□□ -1.08
TNFRSF17-201ENST00000053243 NCOA3Q9Y6Q9 1424 aa8.31□□□□□ -1.08
TNFRSF17-201ENST00000053243 CFHP08603 1231 aa8.31□□□□□ -1.08
TNFRSF17-201ENST00000053243 PPP4CP60510 307 aa8.31□□□□□ -1.08
TNFRSF17-201ENST00000053243 CCDC136Q96JN2 1154 aa8.31□□□□□ -1.08
TNFRSF17-201ENST00000053243 MYH16Q9H6N6 1097 aa8.31□□□□□ -1.08
TNFRSF17-201ENST00000053243 ALS2Q96Q42 1657 aa8.3□□□□□ -1.08
TNFRSF17-201ENST00000053243 STRCP1A6NGW2 1772 aa8.3□□□□□ -1.08
TNFRSF17-201ENST00000053243 MST1RQ04912 1400 aa8.3□□□□□ -1.08
TNFRSF17-201ENST00000053243 SPTLC1O15269 473 aa8.3□□□□□ -1.08
TNFRSF17-201ENST00000053243 TMPOP42166 694 aaKnown RBP8.3□□□□□ -1.08
TNFRSF17-201ENST00000053243 RIC3Q7Z5B4 369 aa8.3□□□□□ -1.08
TNFRSF17-201ENST00000053243 NME9Q86XW9 330 aa8.3□□□□□ -1.08
TNFRSF17-201ENST00000053243 ZMYND15Q9H091 742 aa8.3□□□□□ -1.08
TNFRSF17-201ENST00000053243 N4BP2Q86UW6 1770 aaPredicted RBP8.3□□□□□ -1.08
TNFRSF17-201ENST00000053243 DCCP43146 1447 aa8.29□□□□□ -1.08
TNFRSF17-201ENST00000053243 SLIT3O75094 1523 aa8.29□□□□□ -1.08
TNFRSF17-201ENST00000053243 NFAT5O94916 1531 aa8.29□□□□□ -1.08
TNFRSF17-201ENST00000053243 XIRP1Q702N8 1843 aaKnown RBP8.29□□□□□ -1.08
TNFRSF17-201ENST00000053243 MOXD2PA6NHM9 499 aa8.29□□□□□ -1.08
TNFRSF17-201ENST00000053243 KCNA6P17658 529 aa8.29□□□□□ -1.08
TNFRSF17-201ENST00000053243 IL13P35225 146 aa8.29□□□□□ -1.08
TNFRSF17-201ENST00000053243 GCGRP47871 477 aa8.29□□□□□ -1.08
TNFRSF17-201ENST00000053243 FLIIQ13045 1269 aa8.29□□□□□ -1.08
TNFRSF17-201ENST00000053243 PDE3AQ14432 1141 aa8.29□□□□□ -1.08
TNFRSF17-201ENST00000053243 TUSC1Q2TAM9 212 aa8.29□□□□□ -1.08
TNFRSF17-201ENST00000053243 B4GALNT3Q6L9W6 998 aa8.29□□□□□ -1.08
TNFRSF17-201ENST00000053243 RSBN1LQ6PCB5 846 aaPredicted RBP8.29□□□□□ -1.08
TNFRSF17-201ENST00000053243 NUTM1Q86Y26 1132 aa8.29□□□□□ -1.08
TNFRSF17-201ENST00000053243 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.29□□□□□ -1.08
TNFRSF17-201ENST00000053243 NECTIN2Q92692 538 aa8.29□□□□□ -1.08
TNFRSF17-201ENST00000053243 SBNO1A3KN83 1393 aa8.29□□□□□ -1.08
TNFRSF17-201ENST00000053243 RTL1A6NKG5 1358 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms