RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 CWF19L2Q2TBE0 894 aaKnown RBP16.05■□□□□ 0.16
CTNS-201ENST00000046640 ZGPATQ8N5A5 531 aaKnown RBP16.05■□□□□ 0.16
CTNS-201ENST00000046640 PXDNQ92626 1479 aa16.05■□□□□ 0.16
CTNS-201ENST00000046640 IBTKQ9P2D0 1353 aaPredicted RBP16.05■□□□□ 0.16
CTNS-201ENST00000046640 CHRNA2Q15822 529 aa16.05■□□□□ 0.16
CTNS-201ENST00000046640 BEND3Q5T5X7 828 aa16.05■□□□□ 0.16
CTNS-201ENST00000046640 OSBPL3Q9H4L5 887 aa16.05■□□□□ 0.16
CTNS-201ENST00000046640 MAP3K2Q9Y2U5 619 aa16.05■□□□□ 0.16
CTNS-201ENST00000046640 SOS1Q07889 1333 aaPredicted RBP16.04■□□□□ 0.16
CTNS-201ENST00000046640 PIP4K2AP48426 406 aaPredicted RBP16.04■□□□□ 0.16
CTNS-201ENST00000046640 BABAM1Q9NWV8 329 aa16.04■□□□□ 0.16
CTNS-201ENST00000046640 CIZ1Q9ULV3 898 aaPredicted RBP16.04■□□□□ 0.16
CTNS-201ENST00000046640 NEK4P51957 841 aa16.04■□□□□ 0.16
CTNS-201ENST00000046640 OS9Q13438 667 aaPredicted RBP16.04■□□□□ 0.16
CTNS-201ENST00000046640 IL25Q9H293 177 aa16.04■□□□□ 0.16
CTNS-201ENST00000046640 PALD1Q9ULE6 856 aa16.04■□□□□ 0.16
CTNS-201ENST00000046640 GOLGA6L22H0YM25 854 aa16.03■□□□□ 0.16
CTNS-201ENST00000046640 BAG4O95429 457 aaKnown RBP16.03■□□□□ 0.16
CTNS-201ENST00000046640 CSB-PGBD3P0DP91 1061 aa16.03■□□□□ 0.16
CTNS-201ENST00000046640 C9orf78Q9NZ63 289 aaPredicted RBP16.03■□□□□ 0.16
CTNS-201ENST00000046640 SALL3Q9BXA9 1300 aa16.02■□□□□ 0.16
CTNS-201ENST00000046640 LRRC37A3O60309 1634 aa16.02■□□□□ 0.16
CTNS-201ENST00000046640 AMOTQ4VCS5 1084 aa16.02■□□□□ 0.16
CTNS-201ENST00000046640 RHPN1Q8TCX5 695 aa16.02■□□□□ 0.16
CTNS-201ENST00000046640 SSH3Q8TE77 659 aa16.02■□□□□ 0.16
CTNS-201ENST00000046640 ESYT1Q9BSJ8 1104 aa16.02■□□□□ 0.16
CTNS-201ENST00000046640 PA2G4Q9UQ80 394 aaKnown RBP16.02■□□□□ 0.16
CTNS-201ENST00000046640 GIGYF1O75420 1035 aaPredicted RBP16.02■□□□□ 0.15
CTNS-201ENST00000046640 MYL6BP14649 208 aa16.02■□□□□ 0.15
CTNS-201ENST00000046640 CHMLP26374 656 aa16.02■□□□□ 0.15
CTNS-201ENST00000046640 FAM208AQ9UK61 1670 aaKnown RBP16.02■□□□□ 0.15
CTNS-201ENST00000046640 ST18O60284 1047 aa16.01■□□□□ 0.15
CTNS-201ENST00000046640 SKOR2Q2VWA4 1001 aaPredicted RBP16.01■□□□□ 0.15
CTNS-201ENST00000046640 CAVIN1Q6NZI2 390 aaKnown RBP16.01■□□□□ 0.15
CTNS-201ENST00000046640 DBF4Q9UBU7 674 aaPredicted RBP16.01■□□□□ 0.15
CTNS-201ENST00000046640 UPF3BQ9BZI7 483 aaKnown RBP16.01■□□□□ 0.15
CTNS-201ENST00000046640 JARID2Q92833 1246 aaPredicted RBP16.01■□□□□ 0.15
CTNS-201ENST00000046640 C19orf44Q9H6X5 657 aa16.01■□□□□ 0.15
CTNS-201ENST00000046640 ADCY9O60503 1353 aa16■□□□□ 0.15
CTNS-201ENST00000046640 ATF3P18847 181 aa16■□□□□ 0.15
CTNS-201ENST00000046640 NASPP49321 788 aaPredicted RBP16■□□□□ 0.15
CTNS-201ENST00000046640 NFATC2IPQ8NCF5 419 aa16■□□□□ 0.15
CTNS-201ENST00000046640 TPRNQ4KMQ1 711 aa16■□□□□ 0.15
CTNS-201ENST00000046640 RAPGEF4Q8WZA2 1011 aa16■□□□□ 0.15
CTNS-201ENST00000046640 HSPA2P54652 639 aa15.98■□□□□ 0.15
CTNS-201ENST00000046640 FOXD4L6Q3SYB3 417 aaPredicted RBP15.98■□□□□ 0.15
CTNS-201ENST00000046640 FOXD4L3Q6VB84 417 aaPredicted RBP15.98■□□□□ 0.15
CTNS-201ENST00000046640 RBM27Q9P2N5 1060 aaKnown RBP15.98■□□□□ 0.15
CTNS-201ENST00000046640 LARP6Q9BRS8 491 aaKnown RBP15.98■□□□□ 0.15
CTNS-201ENST00000046640 ERBB3P21860 1342 aa15.98■□□□□ 0.15
CTNS-201ENST00000046640 PRPF40AO75400 957 aaKnown RBP15.97■□□□□ 0.15
CTNS-201ENST00000046640 POLA2Q14181 598 aa15.97■□□□□ 0.15
CTNS-201ENST00000046640 DTNBO60941 627 aa15.97■□□□□ 0.15
CTNS-201ENST00000046640 ANP32BQ92688 251 aaKnown RBP15.97■□□□□ 0.15
CTNS-201ENST00000046640 SIL1Q9H173 461 aa15.97■□□□□ 0.15
CTNS-201ENST00000046640 STAP2Q9UGK3 403 aa15.97■□□□□ 0.15
CTNS-201ENST00000046640 C1orf167Q5SNV9 1468 aa15.96■□□□□ 0.15
CTNS-201ENST00000046640 HOXB7P09629 217 aa15.96■□□□□ 0.15
CTNS-201ENST00000046640 CWC27Q6UX04 472 aaKnown RBP15.96■□□□□ 0.15
CTNS-201ENST00000046640 KSR2Q6VAB6 950 aa15.96■□□□□ 0.15
CTNS-201ENST00000046640 KIF1BPQ96EK5 621 aa15.96■□□□□ 0.15
CTNS-201ENST00000046640 KLHDC4Q8TBB5 520 aa15.96■□□□□ 0.14
CTNS-201ENST00000046640 RIC3Q7Z5B4 369 aa15.95■□□□□ 0.14
CTNS-201ENST00000046640 PI4K2BQ8TCG2 481 aa15.95■□□□□ 0.14
CTNS-201ENST00000046640 PKNOX2Q96KN3 472 aa15.95■□□□□ 0.14
CTNS-201ENST00000046640 SPG7Q9UQ90 795 aa15.95■□□□□ 0.14
CTNS-201ENST00000046640 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.95■□□□□ 0.14
CTNS-201ENST00000046640 TMX3Q96JJ7 454 aa15.95■□□□□ 0.14
CTNS-201ENST00000046640 TMEM94Q12767 1356 aa15.95■□□□□ 0.14
CTNS-201ENST00000046640 RAB11FIP3O75154 756 aa15.94■□□□□ 0.14
CTNS-201ENST00000046640 HSP90AA2PQ14568 343 aaPredicted RBP15.94■□□□□ 0.14
CTNS-201ENST00000046640 ZNF790Q6PG37 636 aa15.94■□□□□ 0.14
CTNS-201ENST00000046640 KLHL40Q2TBA0 621 aa15.94■□□□□ 0.14
CTNS-201ENST00000046640 MCCP23508 829 aa15.93■□□□□ 0.14
CTNS-201ENST00000046640 SUCLG2Q96I99 432 aa15.93■□□□□ 0.14
CTNS-201ENST00000046640 TATP17735 454 aaPredicted RBP15.93■□□□□ 0.14
CTNS-201ENST00000046640 ZNF496Q96IT1 587 aaPredicted RBP15.93■□□□□ 0.14
CTNS-201ENST00000046640 ISY1Q9ULR0 285 aaKnown RBP15.93■□□□□ 0.14
CTNS-201ENST00000046640 USP54Q70EL1 1684 aa15.93■□□□□ 0.14
CTNS-201ENST00000046640 GLIPR1L2Q4G1C9 344 aa15.93■□□□□ 0.14
CTNS-201ENST00000046640 DDX54Q8TDD1 881 aaKnown RBP15.93■□□□□ 0.14
CTNS-201ENST00000046640 BICC1Q9H694 974 aaKnown RBP15.93■□□□□ 0.14
CTNS-201ENST00000046640 USP16Q9Y5T5 823 aa15.93■□□□□ 0.14
CTNS-201ENST00000046640 PDIA6Q15084 440 aa15.92■□□□□ 0.14
CTNS-201ENST00000046640 ZSCAN23Q3MJ62 389 aa15.92■□□□□ 0.14
CTNS-201ENST00000046640 COPS6Q7L5N1 327 aa15.92■□□□□ 0.14
CTNS-201ENST00000046640 XAGE3Q8WTP9 111 aa15.92■□□□□ 0.14
CTNS-201ENST00000046640 CCDC8Q9H0W5 538 aaPredicted RBP15.92■□□□□ 0.14
CTNS-201ENST00000046640 ZDHHC9Q9Y397 364 aa15.92■□□□□ 0.14
CTNS-201ENST00000046640 PXDNLA1KZ92 1463 aa15.92■□□□□ 0.14
CTNS-201ENST00000046640 VSIG10Q8N0Z9 540 aa15.92■□□□□ 0.14
CTNS-201ENST00000046640 CLASRPQ8N2M8 674 aaKnown RBP15.92■□□□□ 0.14
CTNS-201ENST00000046640 LMBRD1Q9NUN5 540 aa15.92■□□□□ 0.14
CTNS-201ENST00000046640 HYPKQ9NX55 129 aa15.92■□□□□ 0.14
CTNS-201ENST00000046640 NPHP3Q7Z494 1330 aa15.91■□□□□ 0.14
CTNS-201ENST00000046640 CPA1P15085 419 aa15.91■□□□□ 0.14
CTNS-201ENST00000046640 PTMSP20962 102 aa15.91■□□□□ 0.14
CTNS-201ENST00000046640 NUCB2P80303 420 aa15.91■□□□□ 0.14
CTNS-201ENST00000046640 AACSQ86V21 672 aa15.91■□□□□ 0.14
CTNS-201ENST00000046640 SLC52A2Q9HAB3 445 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms