RNA–Protein interactions for RNA: ENSMUST00000096386.12

Rnf41-201, Transcript of E3 ubiquitin-protein ligase NRDP1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf41, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf41-201ENSMUST00000096386 Gli2Q0VGT2 1544 aa12.8□□□□□ -0.36
Rnf41-201ENSMUST00000096386 Exoc6bA6H5Z3 810 aa12.79□□□□□ -0.36
Rnf41-201ENSMUST00000096386 EvcP57680 1005 aa12.79□□□□□ -0.36
Rnf41-201ENSMUST00000096386 Q9D2X8 372 aa12.79□□□□□ -0.36
Rnf41-201ENSMUST00000096386 Adgrl2Q8JZZ7 1487 aa12.79□□□□□ -0.36
Rnf41-201ENSMUST00000096386 Wdr24Q8CFJ9 790 aa12.79□□□□□ -0.36
Rnf41-201ENSMUST00000096386 Nfe2l3Q9WTM4 660 aa12.79□□□□□ -0.36
Rnf41-201ENSMUST00000096386 Spata31d1bE9QA57 1361 aa12.79□□□□□ -0.36
Rnf41-201ENSMUST00000096386 Ddx19aQ61655 478 aaKnown RBP12.79□□□□□ -0.36
Rnf41-201ENSMUST00000096386 Recql4Q75NR7 1216 aaKnown RBP12.79□□□□□ -0.36
Rnf41-201ENSMUST00000096386 Med14A2ABV5 1459 aaKnown RBP12.78□□□□□ -0.36
Rnf41-201ENSMUST00000096386 Hfm1D3Z4R1 1434 aa12.78□□□□□ -0.36
Rnf41-201ENSMUST00000096386 Cfdp1O88271 295 aaKnown RBP12.78□□□□□ -0.36
Rnf41-201ENSMUST00000096386 Plekhm2Q80TQ5 1018 aa12.78□□□□□ -0.36
Rnf41-201ENSMUST00000096386 Znf518aB2RRF6 1478 aaKnown RBP12.78□□□□□ -0.36
Rnf41-201ENSMUST00000096386 Nsd3Q6P2L6 1439 aa12.78□□□□□ -0.36
Rnf41-201ENSMUST00000096386 Alpk3Q924C5 1678 aa12.78□□□□□ -0.36
Rnf41-201ENSMUST00000096386 Cfap58B2RW38 873 aa12.78□□□□□ -0.36
Rnf41-201ENSMUST00000096386 Ube2oQ6ZPJ3 1288 aa12.78□□□□□ -0.36
Rnf41-201ENSMUST00000096386 Gtf2e1Q9D0D5 440 aa12.78□□□□□ -0.36
Rnf41-201ENSMUST00000096386 Qser1A2BIE1 1698 aa12.78□□□□□ -0.36
Rnf41-201ENSMUST00000096386 Pik3r4Q8VD65 1358 aa12.78□□□□□ -0.36
Rnf41-201ENSMUST00000096386 Tbc1d4Q8BYJ6 1307 aa12.78□□□□□ -0.36
Rnf41-201ENSMUST00000096386 Btn2a2A4QPC6 514 aa12.77□□□□□ -0.36
Rnf41-201ENSMUST00000096386 Plcb3P51432 1234 aaKnown RBP12.77□□□□□ -0.36
Rnf41-201ENSMUST00000096386 Adcy2Q80TL1 1090 aa12.77□□□□□ -0.36
Rnf41-201ENSMUST00000096386 Zranb2Q9R020 330 aaKnown RBP12.77□□□□□ -0.36
Rnf41-201ENSMUST00000096386 Kiaa0556Q8C753 1610 aa12.77□□□□□ -0.36
Rnf41-201ENSMUST00000096386 Fmnl2A2APV2 1086 aa12.77□□□□□ -0.37
Rnf41-201ENSMUST00000096386 RargP18911 458 aaKnown RBP12.77□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Ranbp1P34022 203 aaKnown RBP12.77□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Tyro3P55144 880 aa12.77□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Lrrc8aQ80WG5 810 aa12.77□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Hmx1O70218 332 aa12.77□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Tpm4Q6IRU2 248 aa12.77□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Trak2Q6P9N8 913 aa12.77□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Pwp2Q8BU03 919 aaKnown RBP12.77□□□□□ -0.37
Rnf41-201ENSMUST00000096386 KinQ8K339 391 aa12.77□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Ciz1Q8VEH2 845 aa12.77□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Adgrl1Q80TR1 1466 aa12.76□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Calcoco2A2A6M5 331 aa12.76□□□□□ -0.37
Rnf41-201ENSMUST00000096386 MccE9PWI3 1003 aa12.76□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Atp2b1G5E829 1220 aa12.76□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Nup88Q8CEC0 753 aaKnown RBP12.76□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Elf2Q9JHC9 593 aa12.76□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Trim55G3X8Y1 545 aa12.76□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Strn4P58404 760 aa12.76□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Zbtb22Q9Z0G7 638 aa12.76□□□□□ -0.37
Rnf41-201ENSMUST00000096386 CenpjQ569L8 1344 aa12.76□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Wdr33Q8K4P0 1330 aaKnown RBP12.76□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Wdr3Q8BHB4 942 aaKnown RBP12.75□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Ap3b2Q9JME5 1082 aa12.75□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Edc4Q3UJB9 1406 aaKnown RBP12.75□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Elmsan1E9Q2I4 1089 aaKnown RBP12.75□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Cnga1P29974 684 aa12.75□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Anapc15P60007 132 aa12.75□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Os9Q8K2C7 672 aa12.75□□□□□ -0.37
Rnf41-201ENSMUST00000096386 EappQ5BU09 281 aa12.75□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Stx6Q9JKK1 255 aa12.75□□□□□ -0.37
Rnf41-201ENSMUST00000096386 DonsonQ9QXP4 560 aa12.75□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Sh3bp5Q9Z131 463 aa12.75□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Map9Q3TRR0 646 aa12.74□□□□□ -0.37
Rnf41-201ENSMUST00000096386 DpydQ8CHR6 1025 aa12.74□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Dnaaf4Q8R368 420 aa12.74□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Ccdc7Q9D541 371 aa12.74□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Casz1Q9CWL2 1761 aa12.74□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Skint5A7XUY5 1461 aa12.74□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Cavin4A2AMM0 362 aa12.74□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Acbd5Q5XG73 508 aa12.74□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Saal1Q9D2C2 474 aa12.74□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Gm20521D3Z5F7 333 aa12.73□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Arid5bQ8BM75 1188 aaKnown RBP12.73□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Dnaaf2Q8BPI1 814 aa12.73□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Cep152A2AUM9 1736 aaKnown RBP12.73□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Cd22P35329 862 aa12.73□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Gabpb2P81069 414 aa12.73□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Mcm6P97311 821 aa12.73□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Utp18Q5SSI6 552 aaKnown RBP12.73□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Mns1Q61884 491 aa12.73□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Npdc1Q64322 332 aa12.73□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Polr3gQ6NXY9 223 aa12.73□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Smarca5Q91ZW3 1051 aaKnown RBP12.73□□□□□ -0.37
Rnf41-201ENSMUST00000096386 FntaQ61239 377 aa12.73□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Stk24Q99KH8 431 aa12.73□□□□□ -0.37
Rnf41-201ENSMUST00000096386 NagaQ9QWR8 415 aa12.73□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Hecw1Q8K4P8 1604 aa12.72□□□□□ -0.37
Rnf41-201ENSMUST00000096386 L1td1Q587J6 782 aaKnown RBP12.72□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Cep83Q9D5R3 692 aa12.72□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Zcchc17Q9ESX4 241 aaKnown RBP12.72□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Dpf1Q9QX66 387 aa12.72□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Lonp2Q9DBN5 852 aa12.72□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Igbp1bQ9QZ29 343 aa12.72□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Talpid3E9PV87 1520 aa12.72□□□□□ -0.37
Rnf41-201ENSMUST00000096386 PaskQ8CEE6 1383 aa12.72□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Ttll12Q3UDE2 639 aa12.71□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Cyp46a1Q9WVK8 500 aa12.71□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Mast1Q9R1L5 1570 aa12.71□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Zfp804bA0A0G2JGH6 1343 aa12.71□□□□□ -0.37
Rnf41-201ENSMUST00000096386 MecomP14404 1042 aa12.71□□□□□ -0.37
Rnf41-201ENSMUST00000096386 Q8VDP2 222 aa12.71□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms