RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 AnlnQ8K298 1121 aaKnown RBP11.46□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 LlphQ9D945 130 aaKnown RBP11.46□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Rapgef6Q5NCJ1 1609 aa11.46□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Lrrc9Q8CDN9 1456 aa11.46□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Gprasp1Q5U4C1 1347 aa11.46□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Ktn1Q61595 1327 aaKnown RBP11.46□□□□□ -0.57
Hmgb1-201ENSMUST00000085546 Hmx1O70218 332 aa11.46□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Mcm2P97310 904 aa11.46□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Sh3gl3Q62421 347 aa11.46□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Kri1Q8VDQ9 704 aaKnown RBP11.46□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Zcchc17Q9ESX4 241 aaKnown RBP11.46□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Fmn2Q9JL04 1578 aa11.46□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Mcm6P97311 821 aa11.45□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Ddx19aQ61655 478 aaKnown RBP11.45□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 U2surpQ6NV83 1029 aaKnown RBP11.45□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Def6Q8C2K1 630 aa11.45□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Kiaa1551Q5DTW7 1521 aa11.45□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Abca9Q8K449 1623 aa11.45□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Gdap1l1Q8VE33 370 aa11.45□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Gcc1Q9D4H2 778 aa11.45□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Tubb4aQ9D6F9 444 aa11.45□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Adamts13Q769J6 1426 aa11.45□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Ccdc40Q8BI79 1192 aa11.45□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Dnaaf2Q8BPI1 814 aa11.45□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Wdr33Q8K4P0 1330 aaKnown RBP11.44□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Tyro3P55144 880 aa11.44□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Bach1P97302 739 aa11.44□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Smarcc2Q6PDG5 1213 aa11.44□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Naa30Q8CES0 364 aa11.44□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Eif3cQ8R1B4 911 aaKnown RBP11.44□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Ccdc47Q9D024 483 aaKnown RBP11.44□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Adamts12Q811B3 1600 aa11.44□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Ccdc121E9Q6D3 323 aa11.44□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Gm42641I6L9G2 585 aa11.44□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Srpk2O54781 681 aaKnown RBP11.44□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Mum1Q6DID5 682 aa11.44□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 AtripQ8BMG1 785 aa11.44□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Bmp2kQ91Z96 1138 aa11.44□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Sh2b1Q91ZM2 756 aa11.44□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 CemipQ8BI06 1361 aa11.43□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Kifc2O08672 792 aa11.43□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Q32P12 615 aa11.43□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Gucy2cQ3UWA6 1072 aa11.43□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Trim27Q62158 513 aa11.43□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Wdr24Q8CFJ9 790 aa11.43□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Stag1Q9D3E6 1258 aa11.43□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 ChmQ9QXG2 665 aa11.43□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Uggt2E9Q4X2 1504 aa11.43□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Tnnt1O88346 262 aa11.43□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Nap1l2P51860 460 aa11.43□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Anks1aP59672 1150 aa11.43□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Atp11aP98197 1187 aa11.43□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Snw1Q9CSN1 536 aaKnown RBP11.43□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Cep170Q6A065 1588 aa11.42□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Atp10dQ8K2X1 1416 aa11.42□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Panx2Q6IMP4 677 aa11.42□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Erc2Q6PH08 957 aa11.42□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Stk11Q9WTK7 436 aa11.42□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Cfap65Q3V0B4 1847 aa11.42□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 TrdnE9Q9K5 693 aa11.42□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Actn3O88990 900 aaKnown RBP11.42□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Ccdc102aQ3TMW1 549 aa11.42□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Ctnna3Q65CL1 895 aa11.42□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Tmco3Q8BH01 678 aa11.42□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 4930550L24RikQ99PA7 320 aa11.42□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Ipo7Q9EPL8 1038 aaKnown RBP11.42□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Nfe2l3Q9WTM4 660 aa11.42□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Ttc37F8VPK0 1563 aa11.42□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Hfm1D3Z4R1 1434 aa11.42□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Med14A2ABV5 1459 aaKnown RBP11.42□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Zscan20B2KFW1 1030 aa11.41□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Jakmip3Q5DTN8 844 aa11.41□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 A1cfQ5YD48 595 aa11.41□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Nup88Q8CEC0 753 aaKnown RBP11.41□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Q8CEZ4 452 aa11.41□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Tada3Q8R0L9 432 aa11.41□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 GsdmaQ9EST1 446 aa11.41□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Abca8bQ8K440 1620 aa11.41□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Strn4P58404 760 aa11.41□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Ccdc33Q3ULW6 985 aa11.41□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Znf330Q922H9 316 aa11.41□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Adgrl1Q80TR1 1466 aa11.41□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Adgrl2Q8JZZ7 1487 aa11.41□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Ccdc112A0AUP1 442 aa11.41□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Anapc15P60007 132 aa11.41□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 IqcgQ80W32 419 aa11.41□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 LarsQ8BMJ2 1178 aa11.41□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Ccdc186Q8C9S4 917 aa11.41□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Smc4Q8CG47 1286 aa11.41□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Phc3Q8CHP6 981 aa11.41□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Q9D1Z2 194 aa11.41□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Ccdc7Q9D541 371 aa11.41□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Prex2Q3LAC4 1598 aa11.4□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 L1td1Q587J6 782 aaKnown RBP11.4□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Eif4g2Q62448 906 aaKnown RBP11.4□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Ints4Q8CIM8 964 aa11.4□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 KinQ8K339 391 aa11.4□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Flad1Q8R123 492 aa11.4□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Igbp1bQ9QZ29 343 aa11.4□□□□□ -0.58
Hmgb1-201ENSMUST00000085546 Hecw2Q6I6G8 1578 aa11.4□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 11.9 ms