RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Gtf3c5Q8R2T8 520 aa13.37□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Lrrc7Q80TE7 1490 aa13.37□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Mtx1P47802 317 aa13.37□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Anp32eP97822 260 aaKnown RBP13.37□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Trim25Q61510 634 aaKnown RBP13.37□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Ppp6r1Q7TSI3 856 aa13.37□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Edc3Q8K2D3 508 aaKnown RBP13.37□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Syt10Q9R0N4 523 aa13.37□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Cct2P80314 535 aaKnown RBP13.36□□□□□ -0.27
Topbp1-201ENSMUST00000035164 ZwintQ9CQU5 252 aa13.36□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Ercc3P49135 783 aa13.36□□□□□ -0.27
Topbp1-201ENSMUST00000035164 MarsQ68FL6 902 aaKnown RBP13.36□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Rbm8a2A0A0N4SUH6 174 aa13.36□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Irgm2A0A140LIF8 407 aa13.36□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Serpinb6bO08804 377 aa13.36□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Rbm8aQ9CWZ3 174 aa13.36□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Igbp1bQ9QZ29 343 aa13.36□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Map3k19E9Q3S4 1311 aa13.36□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Cfap58B2RW38 873 aa13.36□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Elmsan1E9Q2I4 1089 aaKnown RBP13.36□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Trim28Q62318 834 aa13.36□□□□□ -0.27
Topbp1-201ENSMUST00000035164 CenpqQ9CPQ5 267 aa13.36□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Rufy3Q9D394 469 aa13.36□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Cfap157Q0VFX2 523 aa13.36□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Brpf3B2KF05 1204 aaKnown RBP13.35□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Ppfia1B2RXQ2 1266 aa13.35□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Slu7Q8BHJ9 585 aa13.35□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Nfe2l3Q9WTM4 660 aa13.35□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Evi5lH3BKQ3 813 aa13.35□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Cd22P35329 862 aa13.35□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Gigyf1Q99MR1 1044 aaKnown RBP13.35□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Chl1P70232 1209 aa13.35□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Tmem132aQ922P8 1018 aa13.35□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Ncbp3Q8BZR9 615 aaKnown RBP13.34□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Cep170Q6A065 1588 aa13.34□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Zbtb3Q91X45 518 aa13.34□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Tpm1P58771 284 aa13.34□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Mns1Q61884 491 aa13.34□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Ifit2Q64112 472 aa13.34□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Usp54Q8BL06 1588 aaKnown RBP13.33□□□□□ -0.27
Topbp1-201ENSMUST00000035164 Gas2l3Q3UWW6 683 aa13.33□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Zfp397Q7TNK4 527 aa13.33□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Fsd1Q7TPM6 496 aa13.33□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Tmem132eQ6IEE6 982 aa13.33□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Ddx27Q921N6 760 aaKnown RBP13.33□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Rusc2Q80U22 1514 aa13.33□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Cct4P80315 539 aaKnown RBP13.33□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Ccdc102aQ3TMW1 549 aa13.33□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Uhrf1bp1lA2RSJ4 1457 aa13.32□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Ier5O89113 308 aa13.32□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Dennd6aQ8BH65 605 aa13.32□□□□□ -0.28
Topbp1-201ENSMUST00000035164 L1td1Q587J6 782 aaKnown RBP13.32□□□□□ -0.28
Topbp1-201ENSMUST00000035164 E4f1Q8CCE9 783 aa13.32□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Stk38Q91VJ4 465 aa13.32□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Ubash3aQ3V3E1 624 aa13.32□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Tbc1d31Q6NXY1 996 aa13.32□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Vps18Q8R307 973 aa13.32□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Zbtb21E9Q444 1094 aa13.32□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Mdm2P23804 489 aa13.32□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Ifit1Q64282 463 aa13.32□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Unc5clQ6R653 518 aa13.32□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Rec8Q8C5S7 591 aa13.32□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Dync1i1O88485 628 aa13.31□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Eif5P59325 429 aaKnown RBP13.31□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Ano1Q8BHY3 960 aa13.31□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Arid5bQ8BM75 1188 aaKnown RBP13.31□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Mrvi1Q9WUX5 899 aaKnown RBP13.31□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Skint5A7XUY5 1461 aa13.31□□□□□ -0.28
Topbp1-201ENSMUST00000035164 NefhP19246 1090 aa13.31□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Cplx1P63040 134 aa13.31□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Bloc1s2Q9CWG9 143 aa13.31□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Rad50P70388 1312 aa13.31□□□□□ -0.28
Topbp1-201ENSMUST00000035164 TrhQ62361 256 aa13.3□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Atp1a3Q6PIC6 1013 aa13.3□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Ythdc2B2RR83 1445 aaKnown RBP13.3□□□□□ -0.28
Topbp1-201ENSMUST00000035164 4930548H24RikQ9D496 437 aa13.3□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Mcm6P97311 821 aa13.3□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Ccdc162pQ0VG85 912 aa13.3□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Tlr7P58681 1050 aa13.29□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Gnl2Q99LH1 728 aaKnown RBP13.29□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Ak2Q9WTP6 239 aa13.29□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Gm45140A0A0N4SUM8 220 aa13.29□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Cfap99A0A140LIX9 648 aa13.29□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Gabpb2P81069 414 aa13.29□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Eya1P97767 591 aa13.29□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Uri1Q3TLD5 531 aa13.29□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Znf608Q56A10 1511 aa13.29□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Irx2P81066 474 aa13.29□□□□□ -0.28
Topbp1-201ENSMUST00000035164 CtcfQ61164 736 aaKnown RBP13.29□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Ltv1Q6NSQ7 470 aaKnown RBP13.29□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Spag5Q7TME2 1165 aa13.29□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Igf1rQ60751 1373 aa13.29□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Me3Q8BMF3 604 aa13.29□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Paxbp1P58501 919 aa13.28□□□□□ -0.28
Topbp1-201ENSMUST00000035164 TatQ8QZR1 454 aa13.28□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Kif1bQ60575 1816 aaKnown RBP13.28□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Pkp1P97350 728 aaKnown RBP13.28□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Oxsr1Q6P9R2 527 aa13.28□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Frat2Q8K025 231 aa13.28□□□□□ -0.28
Topbp1-201ENSMUST00000035164 Pms1Q8K119 917 aa13.28□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 22.6 ms