RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Pdzd9Q9D9M4 266 aa15.5■□□□□ 0.07
Rnf4-201ENSMUST00000030992 FocadA2AKG8 1798 aa15.5■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Cfdp1O88271 295 aaKnown RBP15.5■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Map3k2Q61083 619 aa15.5■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Tgfb1i1Q62219 461 aa15.5■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Mphosph10Q810V0 681 aaKnown RBP15.5■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Phf14Q9D4H9 881 aa15.5■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Pmfbp1Q9WVQ0 1022 aa15.5■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Tjp1P39447 1745 aaKnown RBP15.49■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Taf7Q9R1C0 341 aa15.49■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Abcc4E9Q236 1325 aa15.49■□□□□ 0.07
Rnf4-201ENSMUST00000030992 TkfcQ8VC30 578 aa15.49■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Pdia6Q922R8 440 aaKnown RBP15.49■□□□□ 0.07
Rnf4-201ENSMUST00000030992 MccE9PWI3 1003 aa15.48■□□□□ 0.07
Rnf4-201ENSMUST00000030992 NexnQ7TPW1 607 aa15.48■□□□□ 0.07
Rnf4-201ENSMUST00000030992 SympkQ80X82 1284 aa15.48■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Kiaa0232Q80U59 1396 aaKnown RBP15.48■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Gm10471E9Q1C7 252 aa15.48■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Hsp90b1P08113 802 aaKnown RBP15.48■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Mum1Q6DID5 682 aa15.48■□□□□ 0.07
Rnf4-201ENSMUST00000030992 ThemisQ8BGW0 636 aa15.48■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Tmx3Q8BXZ1 456 aa15.48■□□□□ 0.07
Rnf4-201ENSMUST00000030992 OptnQ8K3K8 584 aa15.48■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Eif3aP23116 1344 aaKnown RBP15.47■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Brpf1B2RRD7 1212 aa15.47■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Ccdc7Q9D541 371 aa15.47■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Gdpd2Q9ESM6 539 aa15.47■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Map3k13Q1HKZ5 959 aa15.47■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Slc4a10Q5DTL9 1118 aa15.47■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Irf9Q61179 399 aa15.47■□□□□ 0.07
Rnf4-201ENSMUST00000030992 PtmsQ9D0J8 101 aaKnown RBP15.47■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Tceal9Q9DD24 104 aa15.47■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Ddx60E9PZQ1 1711 aa15.47■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Dixdc1Q80Y83 711 aa15.46■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Bcl2l13P59017 434 aa15.46■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Kif20aP97329 887 aa15.46■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Ccdc155Q80VJ8 648 aa15.46■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Rad50P70388 1312 aa15.46■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Evi5lH3BKQ3 813 aa15.46■□□□□ 0.06
Rnf4-201ENSMUST00000030992 CrklP47941 303 aa15.46■□□□□ 0.06
Rnf4-201ENSMUST00000030992 DekQ7TNV0 380 aaKnown RBP15.46■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Tshz3Q8CGV9 1081 aa15.46■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Phkg2Q9DB30 406 aa15.46■□□□□ 0.06
Rnf4-201ENSMUST00000030992 GnpatP98192 678 aa15.45■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Iqsec3Q3TES0 1195 aa15.45■□□□□ 0.06
Rnf4-201ENSMUST00000030992 ImpactO55091 318 aa15.45■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Fam228bQ497Q6 232 aa15.45■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Ppm1mQ8BU27 406 aa15.45■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Card10P58660 1021 aa15.44■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Bcl9lQ67FY2 1494 aa15.44■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Gm45015A0A140LII9 184 aa15.44■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Gm18336A0A140LIU8 765 aa15.44■□□□□ 0.06
Rnf4-201ENSMUST00000030992 EvcP57680 1005 aa15.44■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Utp18Q5SSI6 552 aaKnown RBP15.44■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Morc2aQ69ZX6 1030 aa15.44■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Shank2Q80Z38 1476 aa15.44■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Igfbp6P47880 238 aa15.43■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Jakmip1Q8BVL9 626 aa15.43■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Taf5lQ91WQ5 589 aa15.43■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Abca15E9PWH4 1668 aa15.43■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Pdzrn3Q69ZS0 1063 aa15.43■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Slit1Q80TR4 1531 aa15.43■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Phactr2B1AVP0 632 aa15.42■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Grm8P47743 908 aa15.42■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Atp6v1dP57746 247 aa15.42■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Plcd4Q8K3R3 807 aa15.42■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Bicc1Q99MQ1 977 aaKnown RBP15.42■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Mlh1Q9JK91 760 aa15.42■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Pa2g4P50580 394 aaKnown RBP15.42■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Filip1lQ6P6L0 1131 aa15.42■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Gm21698A0A087WQP8 267 aa15.42■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Gm21671G3UY31 267 aa15.42■□□□□ 0.06
Rnf4-201ENSMUST00000030992 VgfQ0VGU4 617 aa15.42■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Zbtb3Q91X45 518 aa15.42■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Smarce1O54941 411 aaKnown RBP15.41■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Strn4P58404 760 aa15.41■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Brf1Q8CFK2 676 aa15.41■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Add2Q9QYB8 725 aa15.41■□□□□ 0.06
Rnf4-201ENSMUST00000030992 MlecQ6ZQI3 291 aaKnown RBP15.41■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Ddx17Q501J6 650 aaKnown RBP15.4■□□□□ 0.06
Rnf4-201ENSMUST00000030992 KinQ8K339 391 aa15.4■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Stk3Q9JI10 497 aa15.4■□□□□ 0.06
Rnf4-201ENSMUST00000030992 AU015836B2RUM3 263 aa15.4■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Ddx19aQ61655 478 aaKnown RBP15.4■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Chmp7Q8R1T1 451 aa15.4■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Slx4ipQ9D7Y9 413 aa15.4■□□□□ 0.06
Rnf4-201ENSMUST00000030992 Elmsan1E9Q2I4 1089 aaKnown RBP15.39■□□□□ 0.05
Rnf4-201ENSMUST00000030992 EspnlQ3UYR4 1005 aa15.39■□□□□ 0.05
Rnf4-201ENSMUST00000030992 Ssfa2Q922B9 1252 aa15.39■□□□□ 0.05
Rnf4-201ENSMUST00000030992 Lmbr1lQ9D1E5 489 aa15.39■□□□□ 0.05
Rnf4-201ENSMUST00000030992 Ppfia1B2RXQ2 1266 aa15.38■□□□□ 0.05
Rnf4-201ENSMUST00000030992 Nlrp9bQ66X22 1003 aa15.38■□□□□ 0.05
Rnf4-201ENSMUST00000030992 Gm9992B2RWK3 458 aa15.38■□□□□ 0.05
Rnf4-201ENSMUST00000030992 Unc93aQ710D3 458 aa15.38■□□□□ 0.05
Rnf4-201ENSMUST00000030992 Ints3Q7TPD0 1041 aaKnown RBP15.38■□□□□ 0.05
Rnf4-201ENSMUST00000030992 St18Q80TY4 1045 aa15.38■□□□□ 0.05
Rnf4-201ENSMUST00000030992 Atf3Q60765 181 aa15.38■□□□□ 0.05
Rnf4-201ENSMUST00000030992 Asic4Q7TNS7 539 aa15.38■□□□□ 0.05
Rnf4-201ENSMUST00000030992 Zranb3Q6NZP1 1069 aa15.37■□□□□ 0.05
Rnf4-201ENSMUST00000030992 Zfp142G5E869 1843 aa15.37■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 67.4 ms