RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 Hmg20bQ9Z104 317 aa17.6■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Rad23bP54728 416 aa17.6■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Cfap69Q8BH53 942 aa17.6■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Neo1P97798 1493 aa17.6■□□□□ 0.41
Col2a1-201ENSMUST00000023123 AqrQ8CFQ3 1481 aaKnown RBP17.6■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Zmym4A2A791 1549 aaKnown RBP17.59■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Ano10Q8BH79 659 aa17.59■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Mrpl44Q9CY73 333 aaKnown RBP17.59■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Nap1l5Q9JJF0 156 aa17.59■□□□□ 0.41
Col2a1-201ENSMUST00000023123 CebpzP53569 1052 aaKnown RBP17.59■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Slc12a5Q91V14 1138 aa17.59■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Gm21680A0A0G2JGR8 267 aa17.59■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Zhx1P70121 873 aa17.59■□□□□ 0.41
Col2a1-201ENSMUST00000023123 ClasrpQ8CFC7 668 aa17.59■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Tshz3Q8CGV9 1081 aa17.59■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Mug1P28665 1476 aa17.59■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Ampd3O08739 766 aa17.59■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Als2cr12Q8BVM7 383 aa17.59■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Srgap1Q91Z69 1062 aa17.59■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Baiap2l1Q9DBJ3 514 aa17.59■□□□□ 0.41
Col2a1-201ENSMUST00000023123 NexmifQ5DTT1 1515 aa17.59■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Cep120Q7TSG1 988 aa17.58■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Ccdc12Q8R344 166 aaKnown RBP17.58■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Cfap53Q9D439 514 aa17.58■□□□□ 0.41
Col2a1-201ENSMUST00000023123 Ttc21bQ0HA38 1315 aa17.58■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Nkx1-2P42580 305 aa17.58■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Smarcc1P97496 1104 aa17.58■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Tsg101Q61187 391 aa17.58■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Znf653Q6YND2 615 aa17.58■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Cetn2Q9R1K9 172 aa17.58■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Tnni2P13412 182 aa17.58■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Sdc2P43407 202 aa17.58■□□□□ 0.4
Col2a1-201ENSMUST00000023123 GpkowQ56A08 488 aa17.58■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Kdm4aQ8BW72 1064 aa17.58■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Ccdc94Q9D6J3 314 aa17.58■□□□□ 0.4
Col2a1-201ENSMUST00000023123 RalgapbQ8BQZ4 1484 aa17.58■□□□□ 0.4
Col2a1-201ENSMUST00000023123 GmnnO88513 206 aa17.57■□□□□ 0.4
Col2a1-201ENSMUST00000023123 NapbP28663 298 aa17.57■□□□□ 0.4
Col2a1-201ENSMUST00000023123 LifrP42703 1092 aa17.57■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Cct2P80314 535 aaKnown RBP17.57■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Tex2Q6ZPJ0 1128 aaKnown RBP17.57■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Lrrfip2Q91WK0 415 aa17.57■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Chd1lQ9CXF7 900 aa17.57■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Stat1P42225 749 aa17.57■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Snx13Q6PHS6 957 aa17.57■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Smc1aQ9CU62 1233 aaKnown RBP17.57■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Galntl5Q9D4M9 431 aa17.57■□□□□ 0.4
Col2a1-201ENSMUST00000023123 PaskQ8CEE6 1383 aa17.56■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Ces1hD3Z298 562 aa17.56■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Kif2aP28740 705 aa17.56■□□□□ 0.4
Col2a1-201ENSMUST00000023123 HnrnpmQ9D0E1 729 aaKnown RBP17.56■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Ppfia1B2RXQ2 1266 aa17.56■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Clul1Q3ZRW6 464 aa17.56■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Brd3Q8K2F0 726 aaKnown RBP17.56■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Tax1bp1Q3UKC1 814 aaKnown RBP17.56■□□□□ 0.4
Col2a1-201ENSMUST00000023123 CenppQ9CZ92 286 aa17.56■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Akap2O54931 893 aa17.56■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Golim4Q8BXA1 655 aa17.56■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Pik3c2gO70167 1506 aa17.55■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Afap1Q80YS6 731 aa17.55■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Mapk8ip1Q9WVI9 707 aa17.55■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Dync1i1O88485 628 aa17.55■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Cc2d1bQ8BRN9 848 aa17.55■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Eif3bQ8JZQ9 803 aaKnown RBP17.55■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Rapgef4Q9EQZ6 1011 aa17.55■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Chrna2Q91X60 512 aa17.54■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Pcf11G3X9Z4 1553 aa17.54■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Il1rapl2Q9ERS6 686 aa17.54■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Camsap2Q8C1B1 1461 aa17.54■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Mcm6P97311 821 aa17.54■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Ell2Q3UKU1 639 aa17.53■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Ccdc112A0AUP1 442 aa17.53■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Brd1E9PZ26 1189 aaKnown RBP17.53■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Trim27Q62158 513 aa17.53■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Rnf41Q8BH75 317 aa17.53■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Skor1Q8BX46 964 aa17.53■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Sil1Q9EPK6 465 aa17.53■□□□□ 0.4
Col2a1-201ENSMUST00000023123 NmiO35309 314 aa17.53■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Tmem87bQ8BKU8 555 aa17.53■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Fam76aQ922G2 307 aa17.53■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Zscan29E9Q5B4 869 aa17.52■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Tbc1d8Q9Z1A9 1134 aa17.52■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Ttc21aQ8C0S4 1314 aa17.52■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Api5O35841 504 aaKnown RBP17.52■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Nap1l2P51860 460 aa17.52■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Atf7ipQ7TT18 1306 aa17.52■□□□□ 0.4
Col2a1-201ENSMUST00000023123 Krt23Q99PS0 422 aa17.52■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Ctage5Q8R311 779 aa17.51■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Kcnh5Q920E3 988 aa17.51■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Syt10Q9R0N4 523 aa17.51■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Mctp2Q5RJH2 878 aa17.51■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Ltv1Q6NSQ7 470 aaKnown RBP17.51■□□□□ 0.39
Col2a1-201ENSMUST00000023123 RalylQ8BTF8 293 aa17.51■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Cnga2Q62398 664 aa17.51■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Acbd3Q8BMP6 525 aa17.51■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Sall3Q62255 1320 aa17.51■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Pdia3P27773 505 aaKnown RBP17.51■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Grpel1Q99LP6 217 aa17.51■□□□□ 0.39
Col2a1-201ENSMUST00000023123 Dapk3O54784 448 aa17.5■□□□□ 0.39
Col2a1-201ENSMUST00000023123 FanclQ9CR14 375 aa17.5■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms