RNA–Protein interactions for RNA: ENSMUST00000001818.4

Crnkl1-201, Transcript of Crooked neck-like protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Crnkl1, Length 3,428 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1-201ENSMUST00000001818 Pde4dQ01063 747 aa9.29□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Ppm1gQ61074 542 aa9.29□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Echdc1Q9D9V3 322 aa9.29□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Adam1aQ60813 791 aa9.29□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Zfp142G5E869 1843 aa9.29□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Bcl9lQ67FY2 1494 aa9.29□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Cavin2Q63918 418 aaKnown RBP9.28□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Lrit1Q8K099 624 aa9.28□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Rapgef4Q9EQZ6 1011 aa9.28□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 GakQ99KY4 1305 aa9.28□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Cnksr1A2A9K7 700 aa9.28□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Ankrd44B2RXR6 993 aa9.28□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Cwc27Q3TKY6 469 aa9.28□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Tfip11Q9ERA6 838 aaKnown RBP9.28□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Tet3Q8BG87 1668 aa9.28□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Igflr1Q3U4N7 345 aa9.28□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Gm12185Q5NCB2 835 aa9.28□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Bicc1Q99MQ1 977 aaKnown RBP9.28□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Nsfl1cQ9CZ44 370 aaKnown RBP9.28□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 CarsQ9ER72 831 aaKnown RBP9.28□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Scn7aB1AYL1 1681 aa9.27□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Igsf1Q7TQA1 1317 aa9.27□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Map7O88735 730 aa9.27□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Gnl3lQ6PGG6 577 aaKnown RBP9.27□□□□□ -0.92
Crnkl1-201ENSMUST00000001818 Zbtb45Q52KG4 520 aa9.27□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Cypt2Q6P924 180 aa9.27□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Znf541Q0GGX2 1363 aa9.27□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Ccdc27Q3V036 639 aa9.27□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Ankle2Q6P1H6 964 aa9.27□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Fnbp4Q6ZQ03 1031 aa9.27□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Srgap3Q812A2 1099 aa9.27□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 PtprvP70289 1705 aa9.26□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 GalcP54818 684 aa9.26□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Eif4g2Q62448 906 aaKnown RBP9.26□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Fkbp5Q64378 456 aa9.26□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Slf2Q6P9P0 1278 aa9.26□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Zbtb1Q91VL9 713 aa9.26□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Chmp3Q9CQ10 224 aa9.26□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Siglec1Q62230 1695 aa9.26□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Ttc41Q692V3 1318 aa9.26□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Hsp90b1P08113 802 aaKnown RBP9.26□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 CoilQ5SU73 570 aa9.26□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Nlrp3Q8R4B8 1033 aa9.26□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Q9D2X8 372 aa9.26□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Nup153E9Q3G8 1462 aaKnown RBP9.25□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Nkx1-2P42580 305 aa9.25□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Trim27Q62158 513 aa9.25□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Soga3Q6NZL0 945 aa9.25□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Ttc19Q8CC21 365 aa9.25□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 HnrnpuQ8VEK3 800 aaKnown RBP9.25□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Pdia6Q922R8 440 aaKnown RBP9.25□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Lmbr1lQ9D1E5 489 aa9.25□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 KnstrnQ9D9Z1 312 aaKnown RBP9.25□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Disp3A3KFU9 1347 aa9.25□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Gnai2P08752 355 aaKnown RBP9.25□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Igfbp6P47880 238 aa9.25□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 MarsQ68FL6 902 aaKnown RBP9.25□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 DekQ7TNV0 380 aaKnown RBP9.25□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Slfnl1Q8BHW9 410 aa9.25□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Stard3nlQ9DCI3 235 aa9.25□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Znf521Q6KAS7 1311 aa9.25□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Lrp6O88572 1613 aa9.25□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 NgdnQ9DB96 315 aaKnown RBP9.25□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 AppP12023 770 aa9.24□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Hmox1P14901 289 aa9.24□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Nol10Q5RJG1 687 aaKnown RBP9.24□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Fam13aQ8BGI4 693 aa9.24□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Tmem119Q8R138 280 aa9.24□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Stk3Q9JI10 497 aa9.24□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Bcar3Q9QZK2 820 aa9.24□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Rps6ka4Q9Z2B9 773 aa9.24□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Mdc1Q5PSV9 1707 aa9.24□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Tns2Q8CGB6 1400 aa9.24□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Myd88P22366 296 aa9.24□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Cyp2d11P24457 504 aa9.24□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Atl3Q91YH5 541 aa9.24□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Akap11E9Q777 1895 aa9.23□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Ahnak2E9PYB0 1738 aaKnown RBP9.23□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Pim2Q62070 370 aa9.23□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Ppp6r1Q7TSI3 856 aa9.23□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Ppp1r42Q8R1Z4 357 aa9.23□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Trim34aQ99PP6 485 aa9.23□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 NmiO35309 314 aa9.23□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 GptQ8QZR5 496 aa9.23□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Tceal9Q9DD24 104 aa9.23□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Ifit1bl2Q3U687 466 aa9.22□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Mapk8ip1Q9WVI9 707 aa9.22□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Crb1Q8VHS2 1405 aa9.22□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Brpf1B2RRD7 1212 aa9.22□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Abca15E9PWH4 1668 aa9.22□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Arhgap33Q80YF9 1305 aa9.22□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Mst1rQ62190 1378 aa9.22□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Plcb2A3KGF7 1181 aa9.22□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Pa2g4P50580 394 aaKnown RBP9.22□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Prune1Q8BIW1 454 aa9.22□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Q8C5K5 320 aa9.22□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Dmrtc1Q9D9R7 182 aa9.22□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Robo1O89026 1612 aa9.22□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Eva1cP58659 440 aa9.21□□□□□ -0.93
Crnkl1-201ENSMUST00000001818 Tlr7P58681 1050 aa9.21□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms