RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 SLC19A2O60779 497 aa13.08□□□□□ -0.32
HLA-C-210ENST00000640219 NDUFS3O75489 264 aa13.08□□□□□ -0.32
HLA-C-210ENST00000640219 WFS1O76024 890 aa13.08□□□□□ -0.32
HLA-C-210ENST00000640219 CRYABP02511 175 aaKnown RBP13.08□□□□□ -0.32
HLA-C-210ENST00000640219 MAGEA3P43357 314 aa13.08□□□□□ -0.32
HLA-C-210ENST00000640219 PGGT1BP53609 377 aa13.08□□□□□ -0.32
HLA-C-210ENST00000640219 MPP1Q00013 466 aa13.08□□□□□ -0.32
HLA-C-210ENST00000640219 CDK16Q00536 496 aa13.08□□□□□ -0.32
HLA-C-210ENST00000640219 SLC18A2Q05940 514 aa13.08□□□□□ -0.32
HLA-C-210ENST00000640219 CTBP1Q13363 440 aa13.08□□□□□ -0.32
HLA-C-210ENST00000640219 C3AR1Q16581 482 aa13.08□□□□□ -0.32
HLA-C-210ENST00000640219 WLSQ5T9L3 541 aa13.08□□□□□ -0.32
HLA-C-210ENST00000640219 PTRHD1Q6GMV3 140 aaKnown RBP13.08□□□□□ -0.32
HLA-C-210ENST00000640219 KIAA0930Q6ICG6 404 aaPredicted RBP13.08□□□□□ -0.32
HLA-C-210ENST00000640219 KIRREL2Q6UWL6 708 aa13.08□□□□□ -0.32
HLA-C-210ENST00000640219 CTAGE3PQ8IX95 158 aa13.08□□□□□ -0.32
HLA-C-210ENST00000640219 ACBD4Q8NC06 268 aa13.08□□□□□ -0.32
HLA-C-210ENST00000640219 CHDHQ8NE62 594 aaPredicted RBP13.08□□□□□ -0.32
HLA-C-210ENST00000640219 ACVR1CQ8NER5 493 aa13.08□□□□□ -0.32
HLA-C-210ENST00000640219 TCP10LQ8TDR4 215 aa13.08□□□□□ -0.32
HLA-C-210ENST00000640219 LPGAT1Q92604 370 aa13.08□□□□□ -0.32
HLA-C-210ENST00000640219 SIGLEC10Q96LC7 697 aa13.08□□□□□ -0.32
HLA-C-210ENST00000640219 BIRC8Q96P09 236 aa13.08□□□□□ -0.32
HLA-C-210ENST00000640219 TMEM237Q96Q45 408 aa13.08□□□□□ -0.32
HLA-C-210ENST00000640219 SLC30A3Q99726 388 aa13.08□□□□□ -0.32
HLA-C-210ENST00000640219 GPAMQ9HCL2 828 aa13.08□□□□□ -0.32
HLA-C-210ENST00000640219 XAB2Q9HCS7 855 aaKnown RBP13.08□□□□□ -0.32
HLA-C-210ENST00000640219 SPHK1Q9NYA1 384 aa13.08□□□□□ -0.32
HLA-C-210ENST00000640219 ZFP69BQ9UJL9 534 aa13.08□□□□□ -0.32
HLA-C-210ENST00000640219 TINAGQ9UJW2 476 aa13.08□□□□□ -0.32
HLA-C-210ENST00000640219 HS3ST3B1Q9Y662 390 aa13.08□□□□□ -0.32
HLA-C-210ENST00000640219 NCOA6Q14686 2063 aaPredicted RBP13.08□□□□□ -0.32
HLA-C-210ENST00000640219 LIN7AO14910 233 aaPredicted RBP13.07□□□□□ -0.32
HLA-C-210ENST00000640219 CTSBP07858 339 aa13.07□□□□□ -0.32
HLA-C-210ENST00000640219 CNTFP26441 200 aa13.07□□□□□ -0.32
HLA-C-210ENST00000640219 AOAHP28039 575 aa13.07□□□□□ -0.32
HLA-C-210ENST00000640219 PEBP1P30086 187 aaKnown RBP13.07□□□□□ -0.32
HLA-C-210ENST00000640219 SLC1A2P43004 574 aa13.07□□□□□ -0.32
HLA-C-210ENST00000640219 TNFSF10P50591 281 aa13.07□□□□□ -0.32
HLA-C-210ENST00000640219 DEFB110Q30KQ9 67 aa13.07□□□□□ -0.32
HLA-C-210ENST00000640219 ATG16L1Q676U5 607 aa13.07□□□□□ -0.32
HLA-C-210ENST00000640219 ZNF470Q6ECI4 717 aa13.07□□□□□ -0.32
HLA-C-210ENST00000640219 CGB2Q6NT52 195 aa13.07□□□□□ -0.32
HLA-C-210ENST00000640219 ASRGL1Q7L266 308 aa13.07□□□□□ -0.32
HLA-C-210ENST00000640219 LRRC6Q86X45 466 aa13.07□□□□□ -0.32
HLA-C-210ENST00000640219 ADGRF3Q8IZF5 1079 aa13.07□□□□□ -0.32
HLA-C-210ENST00000640219 ZNF655Q8N720 491 aaPredicted RBP13.07□□□□□ -0.32
HLA-C-210ENST00000640219 DNAJB8Q8NHS0 232 aa13.07□□□□□ -0.32
HLA-C-210ENST00000640219 TSSK1BQ9BXA7 367 aa13.07□□□□□ -0.32
HLA-C-210ENST00000640219 MYLK2Q9H1R3 596 aa13.07□□□□□ -0.32
HLA-C-210ENST00000640219 PLAC1Q9HBJ0 212 aa13.07□□□□□ -0.32
HLA-C-210ENST00000640219 FAM60AQ9NP50 221 aa13.07□□□□□ -0.32
HLA-C-210ENST00000640219 SLC22A11Q9NSA0 550 aa13.07□□□□□ -0.32
HLA-C-210ENST00000640219 PLA2G3Q9NZ20 509 aa13.07□□□□□ -0.32
HLA-C-210ENST00000640219 STK38LQ9Y2H1 464 aa13.07□□□□□ -0.32
HLA-C-210ENST00000640219 KLHL20Q9Y2M5 609 aa13.07□□□□□ -0.32
HLA-C-210ENST00000640219 TCRBV9S1A1TA0A576 114 aa13.06□□□□□ -0.32
HLA-C-210ENST00000640219 WDR91A4D1P6 747 aa13.06□□□□□ -0.32
HLA-C-210ENST00000640219 SDR42E2A6NKP2 422 aa13.06□□□□□ -0.32
HLA-C-210ENST00000640219 ZSCAN9O15535 394 aaPredicted RBP13.06□□□□□ -0.32
HLA-C-210ENST00000640219 HCRTR1O43613 425 aa13.06□□□□□ -0.32
HLA-C-210ENST00000640219 RASAL1O95294 804 aa13.06□□□□□ -0.32
HLA-C-210ENST00000640219 TGDSO95455 350 aa13.06□□□□□ -0.32
HLA-C-210ENST00000640219 TTPAP49638 278 aa13.06□□□□□ -0.32
HLA-C-210ENST00000640219 ARFIP2P53365 341 aa13.06□□□□□ -0.32
HLA-C-210ENST00000640219 IST1P53990 364 aa13.06□□□□□ -0.32
HLA-C-210ENST00000640219 KCNJ2P63252 427 aa13.06□□□□□ -0.32
HLA-C-210ENST00000640219 EFTUD2Q15029 972 aaKnown RBP eCLIP13.06□□□□□ -0.323e-6■■■■■ 38.1
HLA-C-210ENST00000640219 TYSND1Q2T9J0 566 aa13.06□□□□□ -0.32
HLA-C-210ENST00000640219 AARS2Q5JTZ9 985 aaKnown RBP13.06□□□□□ -0.32
HLA-C-210ENST00000640219 NEPROQ6NW34 567 aa13.06□□□□□ -0.32
HLA-C-210ENST00000640219 ZNF549Q6P9A3 640 aa13.06□□□□□ -0.32
HLA-C-210ENST00000640219 TLDC1Q6P9B6 456 aa13.06□□□□□ -0.32
HLA-C-210ENST00000640219 CNSTQ6PJW8 725 aa13.06□□□□□ -0.32
HLA-C-210ENST00000640219 UNC5AQ6ZN44 842 aa13.06□□□□□ -0.32
HLA-C-210ENST00000640219 OTOAQ7RTW8 1153 aa13.06□□□□□ -0.32
HLA-C-210ENST00000640219 SLC22A15Q8IZD6 547 aa13.06□□□□□ -0.32
HLA-C-210ENST00000640219 PPM1NQ8N819 430 aa13.06□□□□□ -0.32
HLA-C-210ENST00000640219 C10orf82Q8WW14 230 aa13.06□□□□□ -0.32
HLA-C-210ENST00000640219 PEX13Q92968 403 aa13.06□□□□□ -0.32
HLA-C-210ENST00000640219 ERP27Q96DN0 273 aa13.06□□□□□ -0.32
HLA-C-210ENST00000640219 VPS50Q96JG6 964 aa13.06□□□□□ -0.32
HLA-C-210ENST00000640219 TREX2Q9BQ50 279 aaPredicted RBP13.06□□□□□ -0.32
HLA-C-210ENST00000640219 REPIN1Q9BWE0 567 aaKnown RBP13.06□□□□□ -0.32
HLA-C-210ENST00000640219 CXXC4Q9H2H0 198 aa13.06□□□□□ -0.32
HLA-C-210ENST00000640219 LRMDAQ9H2I8 198 aa13.06□□□□□ -0.32
HLA-C-210ENST00000640219 IARS2Q9NSE4 1012 aaKnown RBP13.06□□□□□ -0.32
HLA-C-210ENST00000640219 C20orf96Q9NUD7 363 aaPredicted RBP13.06□□□□□ -0.32
HLA-C-210ENST00000640219 IRAK4Q9NWZ3 460 aa13.06□□□□□ -0.32
HLA-C-210ENST00000640219 NOP53Q9NZM5 478 aaKnown RBP13.06□□□□□ -0.32
HLA-C-210ENST00000640219 GNPTGQ9UJJ9 305 aa13.06□□□□□ -0.32
HLA-C-210ENST00000640219 HEBP2Q9Y5Z4 205 aa13.06□□□□□ -0.32
HLA-C-210ENST00000640219 CACNA1CQ13936 2221 aa13.06□□□□□ -0.32
HLA-C-210ENST00000640219 MAP1AP78559 2803 aaPredicted RBP13.06□□□□□ -0.32
HLA-C-210ENST00000640219 FAM237BA0A1B0GVD1 139 aa13.05□□□□□ -0.32
HLA-C-210ENST00000640219 VGLL3A8MV65 326 aa13.05□□□□□ -0.32
HLA-C-210ENST00000640219 C2orf74A8MZ97 194 aa13.05□□□□□ -0.32
HLA-C-210ENST00000640219 GPC4O75487 556 aa13.05□□□□□ -0.32
HLA-C-210ENST00000640219 S1PR4O95977 384 aa13.05□□□□□ -0.32
HLA-C-210ENST00000640219 ERVK-10P10266 1014 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms