RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 TMEM74BQ9NUR3 256 aa14.69□□□□□ -0.06
CLN6-219ENST00000637329 HRASLS2Q9NWW9 162 aa14.69□□□□□ -0.06
CLN6-219ENST00000637329 NLGN3Q9NZ94 848 aa14.69□□□□□ -0.06
CLN6-219ENST00000637329 MCM8Q9UJA3 840 aa14.69□□□□□ -0.06
CLN6-219ENST00000637329 ADAM29Q9UKF5 820 aa14.69□□□□□ -0.06
CLN6-219ENST00000637329 PCM1Q15154 2024 aa14.69□□□□□ -0.06
CLN6-219ENST00000637329 CACNA1IQ9P0X4 2223 aa14.69□□□□□ -0.06
CLN6-219ENST00000637329 EP300Q09472 2414 aaPredicted RBP14.68□□□□□ -0.06
CLN6-219ENST00000637329 FRYLO94915 3013 aa14.68□□□□□ -0.06
CLN6-219ENST00000637329 A0A1B0GTQ1 180 aa14.68□□□□□ -0.06
CLN6-219ENST00000637329 FEZF1A0PJY2 475 aa14.68□□□□□ -0.06
CLN6-219ENST00000637329 NDUFS4O43181 175 aa14.68□□□□□ -0.06
CLN6-219ENST00000637329 NUDT21O43809 227 aaKnown RBP14.68□□□□□ -0.06
CLN6-219ENST00000637329 SDC3O75056 442 aa14.68□□□□□ -0.06
CLN6-219ENST00000637329 UBXN7O94888 489 aa14.68□□□□□ -0.06
CLN6-219ENST00000637329 TGFB1P01137 390 aa14.68□□□□□ -0.06
CLN6-219ENST00000637329 ANXA4P09525 319 aaPredicted RBP14.68□□□□□ -0.06
CLN6-219ENST00000637329 ALPPL2P10696 532 aa14.68□□□□□ -0.06
CLN6-219ENST00000637329 IL12AP29459 219 aa14.68□□□□□ -0.06
CLN6-219ENST00000637329 HPCAL1P37235 193 aa14.68□□□□□ -0.06
CLN6-219ENST00000637329 RPL3P39023 403 aaKnown RBP14.68□□□□□ -0.06
CLN6-219ENST00000637329 RAP1GDS1P52306 607 aa14.68□□□□□ -0.06
CLN6-219ENST00000637329 RAE1P78406 368 aaKnown RBP14.68□□□□□ -0.06
CLN6-219ENST00000637329 SLC25A3Q00325 362 aa14.68□□□□□ -0.06
CLN6-219ENST00000637329 ADPRMQ3LIE5 342 aa14.68□□□□□ -0.06
CLN6-219ENST00000637329 VPS26BQ4G0F5 336 aa14.68□□□□□ -0.06
CLN6-219ENST00000637329 TIGD2Q4W5G0 525 aa14.68□□□□□ -0.06
CLN6-219ENST00000637329 PRMT9Q6P2P2 845 aa14.68□□□□□ -0.06
CLN6-219ENST00000637329 ZNF438Q7Z4V0 828 aa14.68□□□□□ -0.06
CLN6-219ENST00000637329 SFTPA2Q8IWL1 248 aa14.68□□□□□ -0.06
CLN6-219ENST00000637329 RIMKLAQ8IXN7 391 aa14.68□□□□□ -0.06
CLN6-219ENST00000637329 DPP10Q8N608 796 aa14.68□□□□□ -0.06
CLN6-219ENST00000637329 DNAJB8Q8NHS0 232 aa14.68□□□□□ -0.06
CLN6-219ENST00000637329 PIGKQ92643 395 aa14.68□□□□□ -0.06
CLN6-219ENST00000637329 TMEM74Q96NL1 305 aa14.68□□□□□ -0.06
CLN6-219ENST00000637329 NPAS2Q99743 824 aa14.68□□□□□ -0.06
CLN6-219ENST00000637329 DUSP23Q9BVJ7 150 aa14.68□□□□□ -0.06
CLN6-219ENST00000637329 RAB33BQ9H082 229 aa14.68□□□□□ -0.06
CLN6-219ENST00000637329 OR51B5Q9H339 312 aa14.68□□□□□ -0.06
CLN6-219ENST00000637329 WDR41Q9HAD4 459 aa14.68□□□□□ -0.06
CLN6-219ENST00000637329 GID8Q9NWU2 228 aa14.68□□□□□ -0.06
CLN6-219ENST00000637329 UCKL1Q9NWZ5 548 aa14.68□□□□□ -0.06
CLN6-219ENST00000637329 WBP11Q9Y2W2 641 aaKnown RBP14.68□□□□□ -0.06
CLN6-219ENST00000637329 ABCA7Q8IZY2 2146 aa14.68□□□□□ -0.06
CLN6-219ENST00000637329 GNG14A0A1W2PPG7 69 aa14.67□□□□□ -0.06
CLN6-219ENST00000637329 PPM1DO15297 605 aa14.67□□□□□ -0.06
CLN6-219ENST00000637329 TBX6O95947 436 aaPredicted RBP14.67□□□□□ -0.06
CLN6-219ENST00000637329 CD1EP15812 388 aa14.67□□□□□ -0.06
CLN6-219ENST00000637329 MAGP20916 626 aa14.67□□□□□ -0.06
CLN6-219ENST00000637329 HNRNPFP52597 415 aaKnown RBP14.67□□□□□ -0.06
CLN6-219ENST00000637329 CYP4F2P78329 520 aa14.67□□□□□ -0.06
CLN6-219ENST00000637329 PWP1Q13610 501 aa14.67□□□□□ -0.06
CLN6-219ENST00000637329 NR1D2Q14995 579 aa14.67□□□□□ -0.06
CLN6-219ENST00000637329 SHBQ15464 509 aa14.67□□□□□ -0.06
CLN6-219ENST00000637329 ZIC1Q15915 447 aa14.67□□□□□ -0.06
CLN6-219ENST00000637329 RSPO4Q2I0M5 234 aaPredicted RBP14.67□□□□□ -0.06
CLN6-219ENST00000637329 TRMT5Q32P41 509 aaKnown RBP14.67□□□□□ -0.06
CLN6-219ENST00000637329 ZCCHC8Q6NZY4 707 aaKnown RBP14.67□□□□□ -0.06
CLN6-219ENST00000637329 C8orf82Q6P1X6 216 aaPredicted RBP14.67□□□□□ -0.06
CLN6-219ENST00000637329 BNC2Q6ZN30 1099 aaPredicted RBP14.67□□□□□ -0.06
CLN6-219ENST00000637329 RNF44Q7L0R7 432 aa14.67□□□□□ -0.06
CLN6-219ENST00000637329 KANSL1Q7Z3B3 1105 aa14.67□□□□□ -0.06
CLN6-219ENST00000637329 CAMKMTQ7Z624 323 aa14.67□□□□□ -0.06
CLN6-219ENST00000637329 NUDT13Q86X67 352 aa14.67□□□□□ -0.06
CLN6-219ENST00000637329 DEFB107AQ8IZN7 70 aa14.67□□□□□ -0.06
CLN6-219ENST00000637329 CARFQ8N187 725 aa14.67□□□□□ -0.06
CLN6-219ENST00000637329 SRFBP1Q8NEF9 429 aaKnown RBP14.67□□□□□ -0.06
CLN6-219ENST00000637329 BAHD1Q8TBE0 780 aaPredicted RBP14.67□□□□□ -0.06
CLN6-219ENST00000637329 NT5CQ8TCD5 201 aa14.67□□□□□ -0.06
CLN6-219ENST00000637329 SLC13A3Q8WWT9 602 aa14.67□□□□□ -0.06
CLN6-219ENST00000637329 RSC1A1Q92681 617 aa14.67□□□□□ -0.06
CLN6-219ENST00000637329 RGMAQ96B86 450 aa14.67□□□□□ -0.06
CLN6-219ENST00000637329 TSSK3Q96PN8 268 aa14.67□□□□□ -0.06
CLN6-219ENST00000637329 SLC38A3Q99624 504 aa14.67□□□□□ -0.06
CLN6-219ENST00000637329 HOPXQ9BPY8 73 aaPredicted RBP14.67□□□□□ -0.06
CLN6-219ENST00000637329 EBPLQ9BY08 206 aa14.67□□□□□ -0.06
CLN6-219ENST00000637329 CAPN10Q9HC96 672 aa14.67□□□□□ -0.06
CLN6-219ENST00000637329 MYNNQ9NPC7 610 aa14.67□□□□□ -0.06
CLN6-219ENST00000637329 DNAH14Q0VDD8 3507 aa14.66□□□□□ -0.06
CLN6-219ENST00000637329 C15orf38-AP3S2A0A0A6YYH1 394 aa14.66□□□□□ -0.06
CLN6-219ENST00000637329 ASPDHA6ND91 283 aa14.66□□□□□ -0.06
CLN6-219ENST00000637329 RHPN2P1A8MT19 583 aa14.66□□□□□ -0.06
CLN6-219ENST00000637329 PLPP1O14494 284 aa14.66□□□□□ -0.06
CLN6-219ENST00000637329 SCAMP2O15127 329 aaKnown RBP14.66□□□□□ -0.06
CLN6-219ENST00000637329 LCMT2O60294 686 aaKnown RBP14.66□□□□□ -0.06
CLN6-219ENST00000637329 CER1O95813 267 aa14.66□□□□□ -0.06
CLN6-219ENST00000637329 PGRP06401 933 aa14.66□□□□□ -0.06
CLN6-219ENST00000637329 PROS1P07225 676 aa14.66□□□□□ -0.06
CLN6-219ENST00000637329 SLC35G6P0C7Q6 338 aa14.66□□□□□ -0.06
CLN6-219ENST00000637329 TACR1P25103 407 aa14.66□□□□□ -0.06
CLN6-219ENST00000637329 GPR3P46089 330 aa14.66□□□□□ -0.06
CLN6-219ENST00000637329 CCT8P50990 548 aa14.66□□□□□ -0.06
CLN6-219ENST00000637329 STXBP1P61764 594 aaKnown RBP14.66□□□□□ -0.06
CLN6-219ENST00000637329 SRSF11Q05519 484 aaKnown RBP14.66□□□□□ -0.06
CLN6-219ENST00000637329 RGS1Q08116 209 aa14.66□□□□□ -0.06
CLN6-219ENST00000637329 TGM3Q08188 693 aa14.66□□□□□ -0.06
CLN6-219ENST00000637329 LRRC74AQ0VAA2 488 aa14.66□□□□□ -0.06
CLN6-219ENST00000637329 FAM174BQ3ZCQ3 159 aa14.66□□□□□ -0.06
CLN6-219ENST00000637329 SPATS1Q496A3 300 aa14.66□□□□□ -0.06
CLN6-219ENST00000637329 FIGLAQ6QHK4 219 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 269.6 ms