RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 TLDC1Q6P9B6 456 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 FIGLAQ6QHK4 219 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 TMIGD1Q6UXZ0 262 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 MILR1Q7Z6M3 343 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 ZNF761Q86XN6 746 aaPredicted RBP6.43□□□□□ -1.38
UPF3B-205ENST00000636792 GBP7Q8N8V2 638 aaPredicted RBP6.43□□□□□ -1.38
UPF3B-205ENST00000636792 Q8N9G6 341 aaPredicted RBP6.43□□□□□ -1.38
UPF3B-205ENST00000636792 C7orf57Q8NEG2 295 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 NT5CQ8TCD5 201 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 LRRC8CQ8TDW0 803 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 NUDT8Q8WV74 236 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 CKAP2Q8WWK9 683 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 WFDC12Q8WWY7 111 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 ATP6V1E2Q96A05 226 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 RERGQ96A58 199 aaPredicted RBP6.43□□□□□ -1.38
UPF3B-205ENST00000636792 PYCR2Q96C36 320 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 CCDC74BQ96LY2 380 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 LRFN5Q96NI6 719 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 TGM7Q96PF1 710 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 MECRQ9BV79 373 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 DDA1Q9BW61 102 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 GATA5Q9BWX5 397 aaPredicted RBP6.43□□□□□ -1.38
UPF3B-205ENST00000636792 ROGDIQ9GZN7 287 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 ILKAPQ9H0C8 392 aaPredicted RBP6.43□□□□□ -1.38
UPF3B-205ENST00000636792 RHBGQ9H310 441 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 CAAP1Q9H8G2 361 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 NOL11Q9H8H0 719 aaKnown RBP6.43□□□□□ -1.38
UPF3B-205ENST00000636792 MANSC1Q9H8J5 431 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 FBXO8Q9NRD0 319 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 NMRK1Q9NWW6 199 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 SIDT1Q9NXL6 827 aaKnown RBP6.43□□□□□ -1.38
UPF3B-205ENST00000636792 FAM53CQ9NYF3 392 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 ZFP69BQ9UJL9 534 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 PILRAQ9UKJ1 303 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 CLCA2Q9UQC9 943 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 PCDHGA3Q9Y5H0 932 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 VPS13AQ96RL7 3174 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 ZNF292O60281 2723 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 CEP250Q9BV73 2442 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 IGHV5-51A0A0C4DH38 117 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 IGKV1-8A0A0C4DH67 115 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 ANKDD1BA6NHY2 528 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 OR7A17O14581 309 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 VPS4BO75351 444 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 TGDSO95455 350 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 HSPA4LO95757 839 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 SERPINA6P08185 405 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 CYC1P08574 325 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 FGF5P12034 268 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 ACPPP15309 386 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 PRPH2P23942 346 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 HMOX2P30519 316 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 GABRA4P48169 554 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 SLC1A6P48664 564 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 ITGA1P56199 1179 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 OCRLQ01968 901 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 RGS1Q08116 209 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 TGM3Q08188 693 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 VAC14Q08AM6 782 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 IFT88Q13099 833 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 CUL3Q13618 768 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 FAM53BQ14153 422 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 DOC2AQ14183 400 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 MAP7Q14244 749 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 SLBPQ14493 270 aaKnown RBP eCLIP6.42□□□□□ -1.38
UPF3B-205ENST00000636792 RBBP7Q16576 425 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 NDUFA9Q16795 377 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 FAM214AQ32MH5 1076 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 ADPRMQ3LIE5 342 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.42□□□□□ -1.38
UPF3B-205ENST00000636792 TMEM35AQ53FP2 167 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 PHF19Q5T6S3 580 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 TMEM164Q5U3C3 297 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 FRG2Q64ET8 278 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 FCRL6Q6DN72 434 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 CEACAM20Q6UY09 585 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 ZNF574Q6ZN55 896 aaPredicted RBP6.42□□□□□ -1.38
UPF3B-205ENST00000636792 FAM92BQ6ZTR7 304 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 TMPRSS7Q7RTY8 843 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 ADCK2Q7Z695 626 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 CUZD1Q86UP6 607 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 TAX1BP1Q86VP1 789 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 PPP1R3BQ86XI6 285 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 WDR75Q8IWA0 830 aaKnown RBP6.42□□□□□ -1.38
UPF3B-205ENST00000636792 DMRTC2Q8IXT2 367 aaPredicted RBP6.42□□□□□ -1.38
UPF3B-205ENST00000636792 GPR135Q8IZ08 494 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 CLYBLQ8N0X4 340 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 LSMEM2Q8N112 164 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 DNAJC22Q8N4W6 341 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 DTWD1Q8N5C7 304 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 CCNYL1Q8N7R7 359 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 MFSD9Q8NBP5 474 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 OR4F6Q8NGB9 312 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 WDR36Q8NI36 951 aaKnown RBP6.42□□□□□ -1.38
UPF3B-205ENST00000636792 WDR20Q8TBZ3 569 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 ADAMTS18Q8TE60 1221 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 TRPC4APQ8TEL6 797 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 N4BP2L2Q92802 583 aaPredicted RBP6.42□□□□□ -1.38
UPF3B-205ENST00000636792 USP7Q93009 1102 aa6.42□□□□□ -1.38
UPF3B-205ENST00000636792 FRG2BQ96QU4 278 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms