RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 AMBNQ9NP70 447 aa17.02■□□□□ 0.31
CACNA1A-225ENST00000636389 CASC3O15234 703 aaKnown RBP17.02■□□□□ 0.31
CACNA1A-225ENST00000636389 GPIP06744 558 aa17.02■□□□□ 0.31
CACNA1A-225ENST00000636389 UBE2NP61088 152 aaKnown RBP17.02■□□□□ 0.31
CACNA1A-225ENST00000636389 RPS14P62263 151 aaKnown RBP17.02■□□□□ 0.31
CACNA1A-225ENST00000636389 PRSS55Q6UWB4 352 aaPredicted RBP17.02■□□□□ 0.31
CACNA1A-225ENST00000636389 CSPG4P5Q96PW8 444 aa17.02■□□□□ 0.31
CACNA1A-225ENST00000636389 GGT2P36268 569 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 RBMXP38159 391 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 ARL13AQ5H913 290 aaPredicted RBP17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 GATSQ8NAP1 163 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 OR5B17Q8NGF7 314 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 FKBPLQ9UIM3 349 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 MKLN1Q9UL63 735 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 SH3PXD2BA1X283 911 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 RTCAO00442 366 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 GBAP04062 536 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 CSNK2A2P19784 350 aaPredicted RBP17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 TUBA4AP68366 448 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 ID2Q02363 134 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 CDNFQ49AH0 187 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 LRRTM4Q86VH4 590 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 GEMIN6Q8WXD5 167 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 ART4Q93070 314 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 PELOQ9BRX2 385 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 ANKRD28O15084 1053 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 PRPS2P11908 318 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 PON3Q15166 354 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 CCDC58Q4VC31 144 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 KRBOX4Q5JUW0 171 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 VARS2Q5ST30 1063 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 ADGRA1Q86SQ6 560 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 C22orf15Q8WYQ4 148 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 SDSLQ96GA7 329 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 SULT4A1Q9BR01 284 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 KATNBL1Q9H079 304 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 MOV10Q9HCE1 1003 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 SMIM35A0A1B0GVV1 85 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 IFNA1P01562 189 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 HMGN1P05114 100 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 H2BFMP0C1H6 154 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 STRADAQ7RTN6 431 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 OR9K2Q8NGE7 335 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 OR10T2Q8NGX3 314 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 FCGR1BQ92637 280 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 TXN2Q99757 166 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 OR51B6Q9H340 312 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 SPATA6Q9NWH7 488 aaPredicted RBP17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 FLRT1Q9NZU1 646 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 POFUT2Q9Y2G5 429 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 SCELO95171 688 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 AHSA1O95433 338 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 HSD11B2P80365 405 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 TREML2Q5T2D2 321 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 LRRC52Q8N7C0 313 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 KREMEN2Q8NCW0 462 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 NSMAFQ92636 917 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 NEDD4LQ96PU5 975 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 GSTT2P0CG29 244 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 NPAS4Q8IUM7 802 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 ZNF619Q8N2I2 560 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 ZNF781Q8N8C0 355 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 PXYLP1Q8TE99 480 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 GIMAP5Q96F15 307 aa17.01■□□□□ 0.31
CACNA1A-225ENST00000636389 RHOQP17081 205 aa17■□□□□ 0.31
CACNA1A-225ENST00000636389 TPTEP56180 551 aa17■□□□□ 0.31
CACNA1A-225ENST00000636389 CDKAL1Q5VV42 579 aa17■□□□□ 0.31
CACNA1A-225ENST00000636389 CHADLQ6NUI6 762 aa17■□□□□ 0.31
CACNA1A-225ENST00000636389 ESAMQ96AP7 390 aa17■□□□□ 0.31
CACNA1A-225ENST00000636389 MAPK3P27361 379 aaPredicted RBP17■□□□□ 0.31
CACNA1A-225ENST00000636389 SLC15A1P46059 708 aa17■□□□□ 0.31
CACNA1A-225ENST00000636389 LIMK2P53671 638 aa17■□□□□ 0.31
CACNA1A-225ENST00000636389 SPIN4Q56A73 249 aa17■□□□□ 0.31
CACNA1A-225ENST00000636389 ZNF517Q6ZMY9 492 aaPredicted RBP17■□□□□ 0.31
CACNA1A-225ENST00000636389 ARL14Q8N4G2 192 aa17■□□□□ 0.31
CACNA1A-225ENST00000636389 OSTF1Q92882 214 aa17■□□□□ 0.31
CACNA1A-225ENST00000636389 TAC3Q9UHF0 121 aa17■□□□□ 0.31
CACNA1A-225ENST00000636389 H1F0P07305 194 aaKnown RBP17■□□□□ 0.31
CACNA1A-225ENST00000636389 TSHRP16473 764 aa17■□□□□ 0.31
CACNA1A-225ENST00000636389 ENGP17813 658 aa17■□□□□ 0.31
CACNA1A-225ENST00000636389 FPGSQ05932 587 aa17■□□□□ 0.31
CACNA1A-225ENST00000636389 OR4D6Q8NGJ1 314 aa17■□□□□ 0.31
CACNA1A-225ENST00000636389 TCAF1Q9Y4C2 921 aa17■□□□□ 0.31
CACNA1A-225ENST00000636389 CD163L1Q9NR16 1453 aa17■□□□□ 0.31
CACNA1A-225ENST00000636389 AIPO00170 330 aa17■□□□□ 0.31
CACNA1A-225ENST00000636389 GRID2O43424 1007 aa17■□□□□ 0.31
CACNA1A-225ENST00000636389 MAGEA8P43361 318 aa17■□□□□ 0.31
CACNA1A-225ENST00000636389 RRAS2P62070 204 aaPredicted RBP17■□□□□ 0.31
CACNA1A-225ENST00000636389 ZNF616Q08AN1 781 aa17■□□□□ 0.31
CACNA1A-225ENST00000636389 TSTQ16762 297 aaKnown RBP17■□□□□ 0.31
CACNA1A-225ENST00000636389 JPH3Q8WXH2 748 aaPredicted RBP17■□□□□ 0.31
CACNA1A-225ENST00000636389 FRZBQ92765 325 aa17■□□□□ 0.31
CACNA1A-225ENST00000636389 TMEM100Q9NV29 134 aa17■□□□□ 0.31
CACNA1A-225ENST00000636389 LRFN1Q9P244 771 aa17■□□□□ 0.31
CACNA1A-225ENST00000636389 SULT1B1O43704 296 aa17■□□□□ 0.31
CACNA1A-225ENST00000636389 TLE3Q04726 772 aa17■□□□□ 0.31
CACNA1A-225ENST00000636389 DDR1Q08345 913 aa17■□□□□ 0.31
CACNA1A-225ENST00000636389 ZNF584Q8IVC4 421 aa17■□□□□ 0.31
CACNA1A-225ENST00000636389 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17■□□□□ 0.31
CACNA1A-225ENST00000636389 HIPK2Q9H2X6 1198 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms