RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 FAM47E-STBD1D6RA91 191 aa16.91■□□□□ 0.3
CLN6-212ENST00000636020 PRMT5O14744 637 aaPredicted RBP16.91■□□□□ 0.3
CLN6-212ENST00000636020 SMAD7O15105 426 aaKnown RBP16.91■□□□□ 0.3
CLN6-212ENST00000636020 RDH16O75452 317 aa16.91■□□□□ 0.3
CLN6-212ENST00000636020 CCNDBP1O95273 360 aa16.91■□□□□ 0.3
CLN6-212ENST00000636020 IL10P22301 178 aa16.91■□□□□ 0.3
CLN6-212ENST00000636020 PPARGP37231 505 aaPredicted RBP16.91■□□□□ 0.3
CLN6-212ENST00000636020 TSTA3Q13630 321 aaPredicted RBP16.91■□□□□ 0.3
CLN6-212ENST00000636020 TYSND1Q2T9J0 566 aa16.91■□□□□ 0.3
CLN6-212ENST00000636020 FBXL19-AS1Q494R0 122 aa16.91■□□□□ 0.3
CLN6-212ENST00000636020 ANKRD20A4Q4UJ75 823 aa16.91■□□□□ 0.3
CLN6-212ENST00000636020 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.91■□□□□ 0.3
CLN6-212ENST00000636020 RGS9BPQ6ZS82 235 aa16.91■□□□□ 0.3
CLN6-212ENST00000636020 ADCK2Q7Z695 626 aa16.91■□□□□ 0.3
CLN6-212ENST00000636020 PDSS2Q86YH6 399 aa16.91■□□□□ 0.3
CLN6-212ENST00000636020 KATNAL2Q8IYT4 538 aa16.91■□□□□ 0.3
CLN6-212ENST00000636020 TMEM156Q8N614 296 aa16.91■□□□□ 0.3
CLN6-212ENST00000636020 RELL2Q8NC24 303 aaPredicted RBP16.91■□□□□ 0.3
CLN6-212ENST00000636020 ARMC2Q8NEN0 867 aa16.91■□□□□ 0.3
CLN6-212ENST00000636020 NFAM1Q8NET5 270 aaPredicted RBP16.91■□□□□ 0.3
CLN6-212ENST00000636020 ACTL9Q8TC94 416 aa16.91■□□□□ 0.3
CLN6-212ENST00000636020 PEX11GQ96HA9 241 aa16.91■□□□□ 0.3
CLN6-212ENST00000636020 CCDC138Q96M89 665 aa16.91■□□□□ 0.3
CLN6-212ENST00000636020 OR1F2PQ96R84 312 aa16.91■□□□□ 0.3
CLN6-212ENST00000636020 DEFB126Q9BYW3 111 aa16.91■□□□□ 0.3
CLN6-212ENST00000636020 LRRC40Q9H9A6 602 aa16.91■□□□□ 0.3
CLN6-212ENST00000636020 TIMMDC1Q9NPL8 285 aa16.91■□□□□ 0.3
CLN6-212ENST00000636020 TRPS1Q9UHF7 1281 aa16.91■□□□□ 0.3
CLN6-212ENST00000636020 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.91■□□□□ 0.3
CLN6-212ENST00000636020 LIPGQ9Y5X9 500 aa16.91■□□□□ 0.3
CLN6-212ENST00000636020 KPNA5O15131 536 aa16.9■□□□□ 0.3
CLN6-212ENST00000636020 MATN4O95460 622 aa16.9■□□□□ 0.3
CLN6-212ENST00000636020 TUBB4AP04350 444 aa16.9■□□□□ 0.3
CLN6-212ENST00000636020 RBP3P10745 1247 aa16.9■□□□□ 0.3
CLN6-212ENST00000636020 ASCL1P50553 236 aa16.9■□□□□ 0.3
CLN6-212ENST00000636020 ABATP80404 500 aa16.9■□□□□ 0.3
CLN6-212ENST00000636020 PLGLB1Q02325 96 aa16.9■□□□□ 0.3
CLN6-212ENST00000636020 ARHGAP19Q14CB8 494 aa16.9■□□□□ 0.3
CLN6-212ENST00000636020 PARP6Q2NL67 630 aa16.9■□□□□ 0.3
CLN6-212ENST00000636020 PTRHD1Q6GMV3 140 aaKnown RBP16.9■□□□□ 0.3
CLN6-212ENST00000636020 DARS2Q6PI48 645 aaKnown RBP16.9■□□□□ 0.3
CLN6-212ENST00000636020 KIAA0408Q6ZU52 694 aa16.9■□□□□ 0.3
CLN6-212ENST00000636020 TRILQ7L0X0 811 aa16.9■□□□□ 0.3
CLN6-212ENST00000636020 LDB1Q86U70 411 aaPredicted RBP16.9■□□□□ 0.3
CLN6-212ENST00000636020 P3H2Q8IVL5 708 aa16.9■□□□□ 0.3
CLN6-212ENST00000636020 OR2M7Q8NG81 312 aa16.9■□□□□ 0.3
CLN6-212ENST00000636020 MRFAP1L1Q96HT8 127 aa16.9■□□□□ 0.3
CLN6-212ENST00000636020 Q96MF0 132 aa16.9■□□□□ 0.3
CLN6-212ENST00000636020 PANX3Q96QZ0 392 aa16.9■□□□□ 0.3
CLN6-212ENST00000636020 BDH2Q9BUT1 245 aa16.9■□□□□ 0.3
CLN6-212ENST00000636020 ANKHQ9HCJ1 492 aa16.9■□□□□ 0.3
CLN6-212ENST00000636020 LMBRD1Q9NUN5 540 aa16.9■□□□□ 0.3
CLN6-212ENST00000636020 KCNE1BA0A087WTH5 132 aa16.89■□□□□ 0.29
CLN6-212ENST00000636020 TUBAL3A6NHL2 446 aa16.89■□□□□ 0.29
CLN6-212ENST00000636020 SAGE2PA6NJ88 616 aa16.89■□□□□ 0.29
CLN6-212ENST00000636020 ACOT7O00154 380 aa16.89■□□□□ 0.29
CLN6-212ENST00000636020 MYO1CO00159 1063 aa16.89■□□□□ 0.29
CLN6-212ENST00000636020 AQP7O14520 342 aa16.89■□□□□ 0.29
CLN6-212ENST00000636020 SLC16A5O15375 505 aa16.89■□□□□ 0.29
CLN6-212ENST00000636020 KIF5CO60282 957 aa16.89■□□□□ 0.29
CLN6-212ENST00000636020 CRLF1O75462 422 aa16.89■□□□□ 0.29
CLN6-212ENST00000636020 GLSO94925 669 aaPredicted RBP16.89■□□□□ 0.29
CLN6-212ENST00000636020 CTNNA2P26232 953 aa16.89■□□□□ 0.29
CLN6-212ENST00000636020 EIF3EP60228 445 aaKnown RBP16.89■□□□□ 0.29
CLN6-212ENST00000636020 FASTKD1Q53R41 847 aaKnown RBP16.89■□□□□ 0.29
CLN6-212ENST00000636020 CCDC181Q5TID7 509 aa16.89■□□□□ 0.29
CLN6-212ENST00000636020 CAPN12Q6ZSI9 719 aa16.89■□□□□ 0.29
CLN6-212ENST00000636020 OTOAQ7RTW8 1153 aa16.89■□□□□ 0.29
CLN6-212ENST00000636020 SLC22A16Q86VW1 577 aa16.89■□□□□ 0.29
CLN6-212ENST00000636020 SLC13A5Q86YT5 568 aaPredicted RBP16.89■□□□□ 0.29
CLN6-212ENST00000636020 CYP4X1Q8N118 509 aa16.89■□□□□ 0.29
CLN6-212ENST00000636020 VWA5B2Q8N398 1253 aa16.89■□□□□ 0.29
CLN6-212ENST00000636020 PSD4Q8NDX1 1056 aa16.89■□□□□ 0.29
CLN6-212ENST00000636020 OR6P1Q8NGX9 317 aa16.89■□□□□ 0.29
CLN6-212ENST00000636020 LRRC46Q96FV0 321 aa16.89■□□□□ 0.29
CLN6-212ENST00000636020 EBNA1BP2Q99848 306 aaKnown RBP16.89■□□□□ 0.29
CLN6-212ENST00000636020 KCMF1Q9P0J7 381 aa16.89■□□□□ 0.29
CLN6-212ENST00000636020 ACAD8Q9UKU7 415 aa16.89■□□□□ 0.29
CLN6-212ENST00000636020 SONP18583 2426 aaKnown RBP16.89■□□□□ 0.29
CLN6-212ENST00000636020 A0A1W2PPR1 153 aa16.88■□□□□ 0.29
CLN6-212ENST00000636020 CLCA1A8K7I4 914 aa16.88■□□□□ 0.29
CLN6-212ENST00000636020 SMTNL1A8MU46 457 aa16.88■□□□□ 0.29
CLN6-212ENST00000636020 H7BY64 318 aa16.88■□□□□ 0.29
CLN6-212ENST00000636020 ITGA10O75578 1167 aa16.88■□□□□ 0.29
CLN6-212ENST00000636020 GOSR1O95249 250 aa16.88■□□□□ 0.29
CLN6-212ENST00000636020 METTL18O95568 372 aa16.88■□□□□ 0.29
CLN6-212ENST00000636020 SERPINC1P01008 464 aa16.88■□□□□ 0.29
CLN6-212ENST00000636020 FHP07954 510 aa16.88■□□□□ 0.29
CLN6-212ENST00000636020 MARCKSL1P49006 195 aa16.88■□□□□ 0.29
CLN6-212ENST00000636020 PNLIPRP1P54315 467 aa16.88■□□□□ 0.29
CLN6-212ENST00000636020 ACVR1Q04771 509 aa16.88■□□□□ 0.29
CLN6-212ENST00000636020 TSTD2Q5T7W7 516 aa16.88■□□□□ 0.29
CLN6-212ENST00000636020 C16orf47Q6ZP98 133 aaPredicted RBP16.88■□□□□ 0.29
CLN6-212ENST00000636020 LRRC75A-AS1Q8N1F1 130 aa16.88■□□□□ 0.29
CLN6-212ENST00000636020 ZCCHC10Q8TBK6 192 aa16.88■□□□□ 0.29
CLN6-212ENST00000636020 ZNF778Q96MU6 729 aa16.88■□□□□ 0.29
CLN6-212ENST00000636020 PRAP1Q96NZ9 151 aa16.88■□□□□ 0.29
CLN6-212ENST00000636020 PKP4Q99569 1192 aa16.88■□□□□ 0.29
CLN6-212ENST00000636020 FAM118BQ9BPY3 351 aa16.88■□□□□ 0.29
CLN6-212ENST00000636020 BPIFA3Q9BQP9 254 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms