RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 GALK1P51570 392 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 CYP4F3Q08477 520 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 ARHGAP19Q14CB8 494 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 PDK3Q15120 406 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 RUNDC3AQ59EK9 446 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 PARM1Q6UWI2 310 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 ZBTB49Q6ZSB9 765 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 GPR180Q86V85 440 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 SYT12Q8IV01 421 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 SFTPA1Q8IWL2 248 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 ADGRG5Q8IZF4 528 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 MARVELD2Q8N4S9 558 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 LILRA3Q8N6C8 439 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-230ENST00000634433 ZNF480Q8WV37 535 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 SGCDQ92629 289 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 WDR34Q96EX3 536 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 APIPQ96GX9 242 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 CENPNQ96H22 339 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-230ENST00000634433 APOLD1Q96LR9 279 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 CCDC115Q96NT0 180 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 GBP5Q96PP8 586 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 HAUS8Q9BT25 410 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 C9orf16Q9BUW7 83 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 SGPP1Q9BX95 441 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 PCBD2Q9H0N5 130 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 GORASP2Q9H8Y8 452 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 PHPT1Q9NRX4 125 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-230ENST00000634433 ACSL5Q9ULC5 683 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 LAMA2P24043 3122 aaKnown RBP6.89□□□□□ -1.31
BRCA1-230ENST00000634433 KIF26AQ9ULI4 1882 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-230ENST00000634433 MUC22E2RYF6 1773 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-230ENST00000634433 PGPEP1LA6NFU8 196 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 EVPLLA8MZ36 301 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 CACNB4O00305 520 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-230ENST00000634433 LINC01565O15544 149 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 PRAMEF4O60810 478 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 SMPD2O60906 423 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 SMNDC1O75940 238 aaKnown RBP eCLIP6.89□□□□□ -1.31
BRCA1-230ENST00000634433 SCELO95171 688 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 PCCBP05166 539 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 JMJD7P0C870 316 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 PIM1P11309 404 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-230ENST00000634433 ZNF24P17028 368 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 SDC1P18827 310 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 TNFSF4P23510 183 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 DRD3P35462 400 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 KIR3DL1P43629 444 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 CHN2P52757 468 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 POLE2P56282 527 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 RPS21P63220 83 aaKnown RBP6.89□□□□□ -1.31
BRCA1-230ENST00000634433 CDK3Q00526 305 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 ZNF674Q2M3X9 581 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 PGS1Q32NB8 556 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 FAM98BQ52LJ0 330 aaKnown RBP6.89□□□□□ -1.31
BRCA1-230ENST00000634433 LRIF1Q5T3J3 769 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 ANXA8L1Q5VT79 327 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 AGBL4Q5VU57 503 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 PRAMEF9Q5VWM5 478 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 KIAA1161Q6NSJ0 714 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 CRTC3Q6UUV7 619 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 SLCO4C1Q6ZQN7 724 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 CHST15Q7LFX5 561 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-230ENST00000634433 PDZD3Q86UT5 571 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 ZNF547Q8IVP9 402 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 DCUN1D3Q8IWE4 304 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 RIMKLAQ8IXN7 391 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 ST13P4Q8IZP2 240 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-230ENST00000634433 GALNT4Q8N4A0 578 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 RAB42Q8N4Z0 105 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 KRTCAP2Q8N6L1 136 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 LINC00469Q8N7U9 141 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 SIMC1Q8NDZ2 872 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 OR2T12Q8NG77 320 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 OR7G3Q8NG95 312 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 OR52E4Q8NGH9 312 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 KISS1RQ969F8 398 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-230ENST00000634433 BIRC7Q96CA5 298 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 CHFRQ96EP1 664 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 TSSK3Q96PN8 268 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 OR4K3Q96R72 315 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 OSBPL11Q9BXB4 747 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 UGT2B28Q9BY64 529 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 ZDHHC5Q9C0B5 715 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 S1PR5Q9H228 398 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 CRLF2Q9HC73 371 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 CCDC177Q9NQR7 707 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-230ENST00000634433 FAM120CQ9NX05 1096 aaKnown RBP6.89□□□□□ -1.31
BRCA1-230ENST00000634433 DLGAP2Q9P1A6 1054 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 ADGRE2Q9UHX3 823 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 HCN2Q9UL51 889 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 INVSQ9Y283 1065 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 ASF1AQ9Y294 204 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 DLGAP4Q9Y2H0 992 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 TTC28Q96AY4 2481 aa6.89□□□□□ -1.31
BRCA1-230ENST00000634433 CHD7Q9P2D1 2997 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 KIAA1549LQ6ZVL6 1849 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 TCRBV5S2A0A599 114 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 ARHGAP10A1A4S6 786 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 ELOVL7A1L3X0 281 aa6.88□□□□□ -1.31
BRCA1-230ENST00000634433 RFXAPO00287 272 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms