RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 ASIC5Q9NY37 505 aa9.12□□□□□ -0.95
PDLIM5-223ENST00000627587 ZIM2Q9NZV7 527 aa9.12□□□□□ -0.95
PDLIM5-223ENST00000627587 MAP10Q9P2G4 905 aa9.12□□□□□ -0.95
PDLIM5-223ENST00000627587 TAC3Q9UHF0 121 aa9.12□□□□□ -0.95
PDLIM5-223ENST00000627587 TEX51A0A1B0GUA7 166 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 PIPSLA2A3N6 862 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 MAGEB17A8MXT2 336 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 MGRN1O60291 552 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 NRP2O60462 931 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 CDH1P12830 882 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 F3P13726 295 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 HSD3B1P14060 373 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 ACP1P24666 158 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 TACR1P25103 407 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 HSD3B2P26439 372 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 SLC19A1P41440 591 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 ART3Q13508 389 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 DDX39BQ13838 428 aaKnown RBP9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 SLBPQ14493 270 aaKnown RBP eCLIP9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 C10orf62Q5T681 223 aaPredicted RBP9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 HES3Q5TGS1 186 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 CACHD1Q5VU97 1274 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 REP15Q6BDI9 236 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 CYB5D1Q6P9G0 228 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 PGM2L1Q6PCE3 622 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 CYP20A1Q6UW02 462 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 C16orf89Q6UX73 402 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 PARP9Q8IXQ6 854 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 DEFB107AQ8IZN7 70 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 OR2L8Q8NGY9 312 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 HUS1BQ8NHY5 278 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 WDR60Q8WVS4 1066 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 PATE1Q8WXA2 126 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 JPH3Q8WXH2 748 aaPredicted RBP9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 CXorf40BQ96DE9 158 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 THTPAQ9BU02 230 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 DENND2DQ9H6A0 471 aaPredicted RBP9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 KIR3DX1Q9H7L2 352 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 BRF2Q9HAW0 419 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 EVA1BQ9NVM1 165 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 TMEM45AQ9NWC5 275 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 SLC7A8Q9UHI5 535 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 BBIP1A8MTZ0 92 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 FXYD1O00168 92 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 NR5A2O00482 541 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 SLC22A3O75751 556 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 PCNAP12004 261 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 BCKDHAP12694 445 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 CTSEP14091 401 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 AMD1P17707 334 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 RAP1GDS1P52306 607 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 KCNK10P57789 538 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 TBL3Q12788 808 aaKnown RBP9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 BNIP3Q12983 259 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 VPS26BQ4G0F5 336 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 GPR155Q7Z3F1 870 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 FAM20CQ8IXL6 584 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 ULK2Q8IYT8 1036 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 KRT78Q8N1N4 520 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 ABHD11Q8NFV4 315 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 OR4K1Q8NGD4 311 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 TSPEARQ8WU66 669 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 UBE2E3Q969T4 207 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 VPS33AQ96AX1 596 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 CMTM7Q96FZ5 175 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 SYNPO2LQ9H987 977 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 SPHK1Q9NYA1 384 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 VPS29Q9UBQ0 182 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 BAIAP2L1Q9UHR4 511 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 CLCA2Q9UQC9 943 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 TMED5Q9Y3A6 229 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 PCDHGA7Q9Y5G6 932 aa9.11□□□□□ -0.95
PDLIM5-223ENST00000627587 ANGPT2O15123 496 aa9.1□□□□□ -0.95
PDLIM5-223ENST00000627587 PCSK2P16519 638 aa9.1□□□□□ -0.95
PDLIM5-223ENST00000627587 SDC1P18827 310 aa9.1□□□□□ -0.95
PDLIM5-223ENST00000627587 JAK1P23458 1154 aa9.1□□□□□ -0.95
PDLIM5-223ENST00000627587 CXCR2P25025 360 aa9.1□□□□□ -0.95
PDLIM5-223ENST00000627587 MAPK1P28482 360 aa9.1□□□□□ -0.95
PDLIM5-223ENST00000627587 SHMT2P34897 504 aa9.1□□□□□ -0.95
PDLIM5-223ENST00000627587 RAE1P78406 368 aaKnown RBP9.1□□□□□ -0.95
PDLIM5-223ENST00000627587 PHEXP78562 749 aa9.1□□□□□ -0.95
PDLIM5-223ENST00000627587 TLR1Q15399 786 aa9.1□□□□□ -0.95
PDLIM5-223ENST00000627587 SF1Q15637 639 aaKnown RBP9.1□□□□□ -0.95
PDLIM5-223ENST00000627587 IYDQ6PHW0 289 aa9.1□□□□□ -0.95
PDLIM5-223ENST00000627587 SCUBE1Q8IWY4 988 aa9.1□□□□□ -0.95
PDLIM5-223ENST00000627587 FAM9CQ8IZT9 166 aa9.1□□□□□ -0.95
PDLIM5-223ENST00000627587 LIX1Q8N485 282 aa9.1□□□□□ -0.95
PDLIM5-223ENST00000627587 ANKRD53Q8N9V6 530 aa9.1□□□□□ -0.95
PDLIM5-223ENST00000627587 PCYOX1LQ8NBM8 494 aa9.1□□□□□ -0.95
PDLIM5-223ENST00000627587 FLVCR1-AS1Q8TAF5 88 aa9.1□□□□□ -0.95
PDLIM5-223ENST00000627587 WBP1Q96G27 269 aa9.1□□□□□ -0.95
PDLIM5-223ENST00000627587 METTL2AQ96IZ6 378 aaKnown RBP9.1□□□□□ -0.95
PDLIM5-223ENST00000627587 EGLN2Q96KS0 407 aa9.1□□□□□ -0.95
PDLIM5-223ENST00000627587 AIF1LQ9BQI0 150 aa9.1□□□□□ -0.95
PDLIM5-223ENST00000627587 LRRC61Q9BV99 259 aa9.1□□□□□ -0.95
PDLIM5-223ENST00000627587 PELI2Q9HAT8 420 aa9.1□□□□□ -0.95
PDLIM5-223ENST00000627587 DMRT3Q9NQL9 472 aa9.1□□□□□ -0.95
PDLIM5-223ENST00000627587 APOBEC3BQ9UH17 382 aaKnown RBP9.1□□□□□ -0.95
PDLIM5-223ENST00000627587 NDUFAF1Q9Y375 327 aa9.1□□□□□ -0.95
PDLIM5-223ENST00000627587 PCDHB11Q9Y5F2 797 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms