RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 A0A1B0GVC2 190 aa12.93□□□□□ -0.34
SNX1-214ENST00000625244 A0A1W2PPB8 328 aa12.93□□□□□ -0.34
SNX1-214ENST00000625244 A0A1W2PRS3 328 aa12.93□□□□□ -0.34
SNX1-214ENST00000625244 KIR3DP1A8MWS1 328 aa12.93□□□□□ -0.34
SNX1-214ENST00000625244 FAM47E-STBD1D6RA91 191 aa12.93□□□□□ -0.34
SNX1-214ENST00000625244 FCHO1O14526 889 aa12.93□□□□□ -0.34
SNX1-214ENST00000625244 CST8O60676 142 aa12.93□□□□□ -0.34
SNX1-214ENST00000625244 IFNA2P01563 188 aa12.93□□□□□ -0.34
SNX1-214ENST00000625244 IL1RNP18510 177 aa12.93□□□□□ -0.34
SNX1-214ENST00000625244 PSMB4P28070 264 aa12.93□□□□□ -0.34
SNX1-214ENST00000625244 FOXN2P32314 431 aa12.93□□□□□ -0.34
SNX1-214ENST00000625244 BCL6P41182 706 aa12.93□□□□□ -0.34
SNX1-214ENST00000625244 PLGLB1Q02325 96 aa12.93□□□□□ -0.34
SNX1-214ENST00000625244 ZNF425Q6IV72 752 aa12.93□□□□□ -0.34
SNX1-214ENST00000625244 SUSD1Q6UWL2 747 aa12.93□□□□□ -0.34
SNX1-214ENST00000625244 PLD3Q8IV08 490 aa12.93□□□□□ -0.34
SNX1-214ENST00000625244 ARMC10Q8N2F6 343 aa12.93□□□□□ -0.34
SNX1-214ENST00000625244 TXLNBQ8N3L3 684 aa12.93□□□□□ -0.34
SNX1-214ENST00000625244 RAB42Q8N4Z0 105 aa12.93□□□□□ -0.34
SNX1-214ENST00000625244 KIAA1191Q96A73 305 aa12.93□□□□□ -0.34
SNX1-214ENST00000625244 HAUS1Q96CS2 278 aa12.93□□□□□ -0.34
SNX1-214ENST00000625244 LRRC46Q96FV0 321 aa12.93□□□□□ -0.34
SNX1-214ENST00000625244 PERPQ96FX8 193 aa12.93□□□□□ -0.34
SNX1-214ENST00000625244 SECISBP2Q96T21 854 aaKnown RBP12.93□□□□□ -0.34
SNX1-214ENST00000625244 TBL1YQ9BQ87 522 aa12.93□□□□□ -0.34
SNX1-214ENST00000625244 LANCL2Q9NS86 450 aa12.93□□□□□ -0.34
SNX1-214ENST00000625244 SPTLC3Q9NUV7 552 aa12.93□□□□□ -0.34
SNX1-214ENST00000625244 TRMT1Q9NXH9 659 aaKnown RBP12.93□□□□□ -0.34
SNX1-214ENST00000625244 UVRAGQ9P2Y5 699 aa12.93□□□□□ -0.34
SNX1-214ENST00000625244 PCYOX1Q9UHG3 505 aa12.93□□□□□ -0.34
SNX1-214ENST00000625244 LCMT1Q9UIC8 334 aa12.93□□□□□ -0.34
SNX1-214ENST00000625244 HSPB2A8KAH6 182 aa12.92□□□□□ -0.34
SNX1-214ENST00000625244 MAGEB17A8MXT2 336 aa12.92□□□□□ -0.34
SNX1-214ENST00000625244 ACOT7O00154 380 aa12.92□□□□□ -0.34
SNX1-214ENST00000625244 CLDN4O14493 209 aa12.92□□□□□ -0.34
SNX1-214ENST00000625244 AQP7O14520 342 aa12.92□□□□□ -0.34
SNX1-214ENST00000625244 DVL2O14641 736 aa12.92□□□□□ -0.34
SNX1-214ENST00000625244 HAT1O14929 419 aa12.92□□□□□ -0.34
SNX1-214ENST00000625244 PHF1O43189 567 aaPredicted RBP12.92□□□□□ -0.34
SNX1-214ENST00000625244 DNAJB6O75190 326 aa12.92□□□□□ -0.34
SNX1-214ENST00000625244 GLSO94925 669 aaPredicted RBP12.92□□□□□ -0.34
SNX1-214ENST00000625244 TUBB4AP04350 444 aa12.92□□□□□ -0.34
SNX1-214ENST00000625244 PKMP14618 531 aaKnown RBP12.92□□□□□ -0.34
SNX1-214ENST00000625244 EZRP15311 586 aaKnown RBP12.92□□□□□ -0.34
SNX1-214ENST00000625244 TPH1P17752 444 aa12.92□□□□□ -0.34
SNX1-214ENST00000625244 MSNP26038 577 aaKnown RBP12.92□□□□□ -0.34
SNX1-214ENST00000625244 MPP1Q00013 466 aa12.92□□□□□ -0.34
SNX1-214ENST00000625244 HSPB2Q16082 182 aa12.92□□□□□ -0.34
SNX1-214ENST00000625244 ASTE1Q2TB18 679 aaPredicted RBP12.92□□□□□ -0.34
SNX1-214ENST00000625244 POMZP3Q6PJE2 187 aa12.92□□□□□ -0.34
SNX1-214ENST00000625244 KRT222Q8N1A0 295 aa12.92□□□□□ -0.34
SNX1-214ENST00000625244 OR2M7Q8NG81 312 aa12.92□□□□□ -0.34
SNX1-214ENST00000625244 CCDC138Q96M89 665 aa12.92□□□□□ -0.34
SNX1-214ENST00000625244 MACROD1Q9BQ69 325 aa12.92□□□□□ -0.34
SNX1-214ENST00000625244 TTTY12Q9BZ98 90 aa12.92□□□□□ -0.34
SNX1-214ENST00000625244 ARNT2Q9HBZ2 717 aa12.92□□□□□ -0.34
SNX1-214ENST00000625244 TIMMDC1Q9NPL8 285 aa12.92□□□□□ -0.34
SNX1-214ENST00000625244 KCMF1Q9P0J7 381 aa12.92□□□□□ -0.34
SNX1-214ENST00000625244 FOXD3Q9UJU5 478 aaPredicted RBP12.92□□□□□ -0.34
SNX1-214ENST00000625244 AAR2Q9Y312 384 aaKnown RBP12.92□□□□□ -0.34
SNX1-214ENST00000625244 CCDC162PA2VCL2 907 aa12.91□□□□□ -0.34
SNX1-214ENST00000625244 MBD3L4A6NDZ8 208 aaPredicted RBP12.91□□□□□ -0.34
SNX1-214ENST00000625244 MBD3L5A6NJ08 208 aaPredicted RBP12.91□□□□□ -0.34
SNX1-214ENST00000625244 GOSR1O95249 250 aa12.91□□□□□ -0.34
SNX1-214ENST00000625244 CNOT4O95628 575 aaKnown RBP12.91□□□□□ -0.34
SNX1-214ENST00000625244 PTMAP06454 111 aaKnown RBP12.91□□□□□ -0.34
SNX1-214ENST00000625244 APOA4P06727 396 aa12.91□□□□□ -0.34
SNX1-214ENST00000625244 CELA3AP09093 270 aa12.91□□□□□ -0.34
SNX1-214ENST00000625244 TMEM253P0C7T8 217 aa12.91□□□□□ -0.34
SNX1-214ENST00000625244 NID1P14543 1247 aa12.91□□□□□ -0.34
SNX1-214ENST00000625244 AOAHP28039 575 aa12.91□□□□□ -0.34
SNX1-214ENST00000625244 RBL1P28749 1068 aa12.91□□□□□ -0.34
SNX1-214ENST00000625244 CDKN2BP42772 138 aa12.91□□□□□ -0.34
SNX1-214ENST00000625244 MAGEA5P43359 124 aa12.91□□□□□ -0.34
SNX1-214ENST00000625244 TFDP2Q14188 446 aa12.91□□□□□ -0.34
SNX1-214ENST00000625244 WLSQ5T9L3 541 aa12.91□□□□□ -0.34
SNX1-214ENST00000625244 ITPRIPL1Q6GPH6 555 aa12.91□□□□□ -0.34
SNX1-214ENST00000625244 RGS9BPQ6ZS82 235 aa12.91□□□□□ -0.34
SNX1-214ENST00000625244 SLC22A16Q86VW1 577 aa12.91□□□□□ -0.34
SNX1-214ENST00000625244 PDSS2Q86YH6 399 aa12.91□□□□□ -0.34
SNX1-214ENST00000625244 TMEM156Q8N614 296 aa12.91□□□□□ -0.34
SNX1-214ENST00000625244 PSD4Q8NDX1 1056 aa12.91□□□□□ -0.34
SNX1-214ENST00000625244 MCOLN3Q8TDD5 553 aa12.91□□□□□ -0.34
SNX1-214ENST00000625244 STYXQ8WUJ0 223 aa12.91□□□□□ -0.34
SNX1-214ENST00000625244 P3H4Q92791 437 aa12.91□□□□□ -0.34
SNX1-214ENST00000625244 PIGTQ969N2 578 aa12.91□□□□□ -0.34
SNX1-214ENST00000625244 PEX11GQ96HA9 241 aa12.91□□□□□ -0.34
SNX1-214ENST00000625244 DEFB126Q9BYW3 111 aa12.91□□□□□ -0.34
SNX1-214ENST00000625244 MTRF1LQ9UGC7 380 aaKnown RBP12.91□□□□□ -0.34
SNX1-214ENST00000625244 INTUQ9ULD6 942 aa12.91□□□□□ -0.34
SNX1-214ENST00000625244 R3HDM2Q9Y2K5 976 aaKnown RBP12.91□□□□□ -0.34
SNX1-214ENST00000625244 SCN3AQ9NY46 2000 aa12.91□□□□□ -0.34
SNX1-214ENST00000625244 TGP01266 2768 aa12.91□□□□□ -0.34
SNX1-214ENST00000625244 G3V3Y1 287 aa12.9□□□□□ -0.34
SNX1-214ENST00000625244 RDH16O75452 317 aa12.9□□□□□ -0.34
SNX1-214ENST00000625244 ITGA10O75578 1167 aa12.9□□□□□ -0.34
SNX1-214ENST00000625244 TNNT1P13805 278 aa12.9□□□□□ -0.34
SNX1-214ENST00000625244 RPA3P35244 121 aaPredicted RBP12.9□□□□□ -0.34
SNX1-214ENST00000625244 MAGEA1P43355 309 aa12.9□□□□□ -0.34
SNX1-214ENST00000625244 TSTA3Q13630 321 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms