RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 OR5H6Q8NGV6 325 aa13.6□□□□□ -0.23
LDB3-209ENST00000623056 CHTF18Q8WVB6 975 aa13.6□□□□□ -0.23
LDB3-209ENST00000623056 TTC9Q92623 222 aa13.6□□□□□ -0.23
LDB3-209ENST00000623056 SNAPC3Q92966 411 aa13.6□□□□□ -0.23
LDB3-209ENST00000623056 EID2BQ96D98 161 aa13.6□□□□□ -0.23
LDB3-209ENST00000623056 SPATA17Q96L03 361 aa13.6□□□□□ -0.23
LDB3-209ENST00000623056 PARK7Q99497 189 aaKnown RBP13.6□□□□□ -0.23
LDB3-209ENST00000623056 TPT1P8Q9HAU6 139 aa13.6□□□□□ -0.23
LDB3-209ENST00000623056 CNOT2Q9NZN8 540 aaKnown RBP13.6□□□□□ -0.23
LDB3-209ENST00000623056 IL17CQ9P0M4 197 aa13.6□□□□□ -0.23
LDB3-209ENST00000623056 OGDHLQ9ULD0 1010 aa13.6□□□□□ -0.23
LDB3-209ENST00000623056 UPK3BL1B0FP48 263 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 UPK3BL2E5RIL1 263 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 YY2O15391 372 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 AMD1P17707 334 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 SOX3P41225 446 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 CDH12P55289 794 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 SPIBQ01892 262 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 FAPQ12884 760 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 NFE2Q16621 373 aaPredicted RBP13.59□□□□□ -0.23
LDB3-209ENST00000623056 GLYR1Q49A26 553 aaPredicted RBP13.59□□□□□ -0.23
LDB3-209ENST00000623056 LRRC66Q68CR7 880 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 PLAG1Q6DJT9 500 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 NOXRED1Q6NXP6 359 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 SYCE2Q6PIF2 218 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 FAM151BQ6UXP7 276 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 FAM109AQ8N4B1 249 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 OR9Q2Q8NGE9 314 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 NPLOC4Q8TAT6 608 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 FRMD6Q96NE9 622 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 ARPC5LQ9BPX5 153 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 MKRN2Q9H000 416 aaKnown RBP13.59□□□□□ -0.23
LDB3-209ENST00000623056 CHST8Q9H2A9 424 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 RNF121Q9H920 327 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 FZD4Q9ULV1 537 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 CMAHPQ9Y471 501 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 KCNE1BA0A087WTH5 132 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 C12orf71A8MTZ7 269 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 KDELR3O43731 214 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 MYCP01106 439 aaPredicted RBP13.59□□□□□ -0.23
LDB3-209ENST00000623056 CSF2P04141 144 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 SCG5P05408 212 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 CTSHP09668 335 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 CSF3P09919 207 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 COX7A2P14406 83 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 TYMPP19971 482 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 PRPS1L1P21108 318 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 RPS3P23396 243 aaKnown RBP eCLIP13.59□□□□□ -0.23
LDB3-209ENST00000623056 ERP29P30040 261 aaKnown RBP13.59□□□□□ -0.23
LDB3-209ENST00000623056 HOXC5Q00444 222 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 BEX3Q00994 111 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 SRSF11Q05519 484 aaKnown RBP13.59□□□□□ -0.23
LDB3-209ENST00000623056 RUNX1T1Q06455 604 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 GRB14Q14449 540 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 DSC3Q14574 896 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 MICAQ29983 383 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 SLC35F1Q5T1Q4 408 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 FAM131AQ6UXB0 335 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 CERS6Q6ZMG9 384 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 NLRP8Q86W28 1048 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 CCDC28AQ8IWP9 274 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 FAM217AQ8IXS0 508 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 TCTE3Q8IZS6 198 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 FAM181AQ8N9Y4 354 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 FBXO32Q969P5 355 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 REPS1Q96D71 796 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 TRMT61AQ96FX7 289 aaKnown RBP13.59□□□□□ -0.23
LDB3-209ENST00000623056 TTLL2Q9BWV7 592 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 GPBP1L1Q9HC44 474 aaPredicted RBP13.59□□□□□ -0.23
LDB3-209ENST00000623056 LATS2Q9NRM7 1088 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 SATB2Q9UPW6 733 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 PCDHB11Q9Y5F2 797 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 DNAH12Q6ZR08 3092 aa13.59□□□□□ -0.23
LDB3-209ENST00000623056 M0QZ92 97 aa13.58□□□□□ -0.23
LDB3-209ENST00000623056 AGRPO00253 132 aa13.58□□□□□ -0.23
LDB3-209ENST00000623056 GCM2O75603 506 aaPredicted RBP13.58□□□□□ -0.23
LDB3-209ENST00000623056 CCNB2O95067 398 aa13.58□□□□□ -0.23
LDB3-209ENST00000623056 FHP07954 510 aa13.58□□□□□ -0.23
LDB3-209ENST00000623056 POU2F1P14859 743 aa13.58□□□□□ -0.23
LDB3-209ENST00000623056 PKLRP30613 574 aa13.58□□□□□ -0.23
LDB3-209ENST00000623056 SLC6A4P31645 630 aa13.58□□□□□ -0.23
LDB3-209ENST00000623056 BNC1Q01954 994 aa13.58□□□□□ -0.23
LDB3-209ENST00000623056 FCHO2Q0JRZ9 810 aa13.58□□□□□ -0.23
LDB3-209ENST00000623056 TUSC3Q13454 348 aa13.58□□□□□ -0.23
LDB3-209ENST00000623056 GPRC6AQ5T6X5 926 aa13.58□□□□□ -0.23
LDB3-209ENST00000623056 CCDC149Q6ZUS6 474 aa13.58□□□□□ -0.23
LDB3-209ENST00000623056 MRPL10Q7Z7H8 261 aaKnown RBP13.58□□□□□ -0.23
LDB3-209ENST00000623056 SYT12Q8IV01 421 aa13.58□□□□□ -0.23
LDB3-209ENST00000623056 LIX1LQ8IVB5 337 aa13.58□□□□□ -0.23
LDB3-209ENST00000623056 YIPF7Q8N8F6 280 aa13.58□□□□□ -0.23
LDB3-209ENST00000623056 SPERTQ8NA61 448 aa13.58□□□□□ -0.23
LDB3-209ENST00000623056 DHRS9Q9BPW9 319 aa13.58□□□□□ -0.23
LDB3-209ENST00000623056 SLC32A1Q9H598 525 aa13.58□□□□□ -0.23
LDB3-209ENST00000623056 RDH14Q9HBH5 336 aa13.58□□□□□ -0.23
LDB3-209ENST00000623056 SH3D21A4FU49 640 aa13.58□□□□□ -0.24
LDB3-209ENST00000623056 PRAMEF1O95521 474 aa13.58□□□□□ -0.24
LDB3-209ENST00000623056 OPN1SWP03999 348 aa13.58□□□□□ -0.24
LDB3-209ENST00000623056 HLA-EP13747 358 aa13.58□□□□□ -0.24
LDB3-209ENST00000623056 NAT1P18440 290 aa13.58□□□□□ -0.24
LDB3-209ENST00000623056 CHMP24386 653 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms