RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 ALYREFQ86V81 257 aaKnown RBP8.74□□□□□ -1.01
HDAC9-229ENST00000622668 KLHDC8AQ8IYD2 350 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 LSMEM2Q8N112 164 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 OR5L2Q8NGL0 311 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 OR5AK3PQ8NH89 298 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 PHOSPHO1Q8TCT1 267 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 DACT3Q96B18 629 aaPredicted RBP8.74□□□□□ -1.01
HDAC9-229ENST00000622668 CCNL2Q96S94 520 aaPredicted RBP8.74□□□□□ -1.01
HDAC9-229ENST00000622668 PCED1AQ9H1Q7 454 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 ADNPQ9H2P0 1102 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 FANCFQ9NPI8 374 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 KLHL1Q9NR64 748 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 HPF1Q9NWY4 346 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 DKKL1Q9UK85 242 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 ACAD8Q9UKU7 415 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 PDE10AQ9Y233 779 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 HYKKA2RU49 373 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 LMO7DNF2Z398 122 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 SLC16A5O15375 505 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 PCDHGA12O60330 932 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 CLEC3AO75596 197 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 SNUPNO95149 360 aaKnown RBP8.74□□□□□ -1.01
HDAC9-229ENST00000622668 VNN2O95498 520 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 PRLHRP49683 370 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 RRADP55042 308 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 CDKN2DP55273 166 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 KIAA1024LP59773 190 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 SQLEQ14534 574 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 SPIN4Q56A73 249 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 ZDHHC24Q6UX98 284 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 KIAA0907Q7Z7F0 614 aaPredicted RBP8.74□□□□□ -1.01
HDAC9-229ENST00000622668 PLPP6Q8IY26 295 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.74□□□□□ -1.01
HDAC9-229ENST00000622668 ZNF555Q8NEP9 628 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 RSC1A1Q92681 617 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 LRRN3Q9H3W5 708 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 SERINC1Q9NRX5 453 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 ZNF282Q9UDV7 671 aaPredicted RBP8.74□□□□□ -1.01
HDAC9-229ENST00000622668 WARS2Q9UGM6 360 aaKnown RBP8.74□□□□□ -1.01
HDAC9-229ENST00000622668 PACSIN3Q9UKS6 424 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 CORO2BQ9UQ03 480 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 MAN2B2Q9Y2E5 1009 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 SNX5Q9Y5X3 404 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 LYVE1Q9Y5Y7 322 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 OAS3Q9Y6K5 1087 aaKnown RBP8.74□□□□□ -1.01
HDAC9-229ENST00000622668 SPTY2D1-AS1A0A0U1RR47 76 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 SCDO00767 359 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 HTRA2O43464 458 aaPredicted RBP8.74□□□□□ -1.01
HDAC9-229ENST00000622668 COQ9O75208 318 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 PIAS2O75928 621 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 MT-CO3P00414 261 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 IGLV3-25P01717 112 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 CHRNGP07510 517 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 CTSLP07711 333 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 AHCYP23526 432 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 IFNGR2P38484 337 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 SEMA3BQ13214 749 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 TMEM215Q68D42 235 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 NXPE4Q6UWF7 544 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 PLEKHM3Q6ZWE6 761 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 DHDDSQ86SQ9 333 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 PEX5LQ8IYB4 626 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 SLC5A8Q8N695 610 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 ASB15Q8WXK1 588 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 CCT7Q99832 543 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 RPF2Q9H7B2 306 aaKnown RBP8.74□□□□□ -1.01
HDAC9-229ENST00000622668 CTPS2Q9NRF8 586 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 SDHAF3Q9NRP4 125 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 SNX13Q9Y5W8 968 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 ARHGEF33A8MVX0 844 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 SGK494L7N484 410 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 SCO2O43819 266 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 DLX3O60479 287 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 F10P00742 488 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 CD63P08962 238 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 CISD3P0C7P0 127 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 SP9P0CG40 484 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 SERPINB1P30740 379 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 ZNF140P52738 457 aaPredicted RBP8.73□□□□□ -1.01
HDAC9-229ENST00000622668 ZNF33BQ06732 778 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 ZNF423Q2M1K9 1284 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 FAM98BQ52LJ0 330 aaKnown RBP8.73□□□□□ -1.01
HDAC9-229ENST00000622668 VWA5B1Q5TIE3 1220 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 TMEM198Q66K66 360 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 GALNT12Q8IXK2 581 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 GALNT4Q8N4A0 578 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 CDRT15Q96T59 188 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 CD93Q9NPY3 652 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 TAGLN3Q9UI15 199 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 PRSS21Q9Y6M0 314 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 DUXAA6NLW8 204 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 IL6P05231 212 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 CHRM5P08912 532 aaPredicted RBP8.73□□□□□ -1.01
HDAC9-229ENST00000622668 ATXN1LP0C7T5 689 aaKnown RBP8.73□□□□□ -1.01
HDAC9-229ENST00000622668 EBLN1P0CF75 366 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 BMP7P18075 431 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 SLC19A1P41440 591 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 TAS2R41P59536 307 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 GPX6P59796 221 aa8.73□□□□□ -1.01
HDAC9-229ENST00000622668 TBL3Q12788 808 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms