RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 TUBA1BP68363 451 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 MC1RQ01726 317 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 POM121L1PQ3SYA9 428 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 LEXMQ3ZCV2 418 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 CPTPQ5TA50 214 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 TUBA1AQ71U36 451 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 OR4A15Q8NGL6 344 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 SIGLEC11Q96RL6 698 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 BEX2Q9BXY8 128 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 PCDH10Q9P2E7 1040 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 PCDHB11Q9Y5F2 797 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 CCDC88CQ9P219 2028 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 TBKBP1A7MCY6 615 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 WWP2O00308 870 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 SEMG1P04279 462 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 HMGA1P17096 107 aaKnown RBP15.19■□□□□ 0.02
NPHP4-211ENST00000622020 NAE1Q13564 534 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 RGNQ15493 299 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 C10orf62Q5T681 223 aaPredicted RBP15.19■□□□□ 0.02
NPHP4-211ENST00000622020 BCDIN3DQ7Z5W3 292 aaKnown RBP15.19■□□□□ 0.02
NPHP4-211ENST00000622020 NRARPQ7Z6K4 114 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 LSRQ86X29 649 aaPredicted RBP15.19■□□□□ 0.02
NPHP4-211ENST00000622020 BBS7Q8IWZ6 715 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 SOCS4Q8WXH5 440 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 SAMD11Q96NU1 681 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 DNAH14Q0VDD8 3507 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 HAT1O14929 419 aa15.18■□□□□ 0.02
NPHP4-211ENST00000622020 IGFBP1P08833 259 aaPredicted RBP15.18■□□□□ 0.02
NPHP4-211ENST00000622020 S100A1P23297 94 aa15.18■□□□□ 0.02
NPHP4-211ENST00000622020 SOX3P41225 446 aa15.18■□□□□ 0.02
NPHP4-211ENST00000622020 CDC20Q12834 499 aa15.18■□□□□ 0.02
NPHP4-211ENST00000622020 SMU1Q2TAY7 513 aa15.18■□□□□ 0.02
NPHP4-211ENST00000622020 FAM214AQ32MH5 1076 aa15.18■□□□□ 0.02
NPHP4-211ENST00000622020 CHST9Q7L1S5 443 aa15.18■□□□□ 0.02
NPHP4-211ENST00000622020 ELMOD1Q8N336 334 aa15.18■□□□□ 0.02
NPHP4-211ENST00000622020 DNAJB8Q8NHS0 232 aa15.18■□□□□ 0.02
NPHP4-211ENST00000622020 WDR36Q8NI36 951 aaKnown RBP15.18■□□□□ 0.02
NPHP4-211ENST00000622020 UBTD2Q8WUN7 234 aa15.18■□□□□ 0.02
NPHP4-211ENST00000622020 DOHHQ9BU89 302 aa15.18■□□□□ 0.02
NPHP4-211ENST00000622020 RDH14Q9HBH5 336 aa15.18■□□□□ 0.02
NPHP4-211ENST00000622020 LRFN2Q9ULH4 789 aa15.18■□□□□ 0.02
NPHP4-211ENST00000622020 CASP8AP2Q9UKL3 1982 aa15.18■□□□□ 0.02
NPHP4-211ENST00000622020 A0A0C4DFX4 3053 aa15.18■□□□□ 0.02
NPHP4-211ENST00000622020 MGAT4DA6NG13 374 aa15.18■□□□□ 0.02
NPHP4-211ENST00000622020 PRAMEF25A6NGN4 478 aa15.18■□□□□ 0.02
NPHP4-211ENST00000622020 TMEM229AB2RXF0 380 aa15.18■□□□□ 0.02
NPHP4-211ENST00000622020 FAM47E-STBD1D6RA91 191 aa15.18■□□□□ 0.02
NPHP4-211ENST00000622020 SOX14O95416 240 aa15.18■□□□□ 0.02
NPHP4-211ENST00000622020 LHCGRP22888 699 aa15.18■□□□□ 0.02
NPHP4-211ENST00000622020 OR2B6P58173 313 aa15.18■□□□□ 0.02
NPHP4-211ENST00000622020 SRSF11Q05519 484 aaKnown RBP15.18■□□□□ 0.02
NPHP4-211ENST00000622020 DOC2AQ14183 400 aa15.18■□□□□ 0.02
NPHP4-211ENST00000622020 CST9Q5W186 159 aa15.18■□□□□ 0.02
NPHP4-211ENST00000622020 PNCKQ6P2M8 343 aa15.18■□□□□ 0.02
NPHP4-211ENST00000622020 SYNPOQ8N3V7 929 aa15.18■□□□□ 0.02
NPHP4-211ENST00000622020 KIAA1958Q8N8K9 716 aa15.18■□□□□ 0.02
NPHP4-211ENST00000622020 NFKBIDQ8NI38 313 aa15.18■□□□□ 0.02
NPHP4-211ENST00000622020 CSGALNACT1Q8TDX6 532 aa15.18■□□□□ 0.02
NPHP4-211ENST00000622020 PITX2Q99697 317 aa15.18■□□□□ 0.02
NPHP4-211ENST00000622020 EMILIN2Q9BXX0 1053 aa15.18■□□□□ 0.02
NPHP4-211ENST00000622020 SGK2Q9HBY8 427 aa15.18■□□□□ 0.02
NPHP4-211ENST00000622020 C11orf16Q9NQ32 467 aa15.18■□□□□ 0.02
NPHP4-211ENST00000622020 ISPDA4D126 451 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 PRKAR2AP13861 404 aaKnown RBP15.17■□□□□ 0.02
NPHP4-211ENST00000622020 PREPP48147 710 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 PRIM2P49643 509 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 HNRNPFP52597 415 aaKnown RBP15.17■□□□□ 0.02
NPHP4-211ENST00000622020 PFN3P60673 137 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 MRPS15P82914 257 aaKnown RBP15.17■□□□□ 0.02
NPHP4-211ENST00000622020 PRKCZQ05513 592 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 TBCEQ15813 527 aaPredicted RBP15.17■□□□□ 0.02
NPHP4-211ENST00000622020 CDKN3Q16667 212 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 LINC00299Q6ZSB3 139 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 VASH1Q7L8A9 365 aaPredicted RBP15.17■□□□□ 0.02
NPHP4-211ENST00000622020 CIDECQ96AQ7 238 aaPredicted RBP15.17■□□□□ 0.02
NPHP4-211ENST00000622020 PLD4Q96BZ4 506 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 CLSTN3Q9BQT9 956 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 SYT17Q9BSW7 474 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 ZDHHC6Q9H6R6 413 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 FBXL12Q9NXK8 326 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 SAGE2PA6NJ88 616 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 IDH3BO43837 385 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 KRT75O95678 551 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 APOA1P02647 267 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 GALTP07902 379 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 PBLDP30039 288 aaPredicted RBP15.17■□□□□ 0.02
NPHP4-211ENST00000622020 CD70P32970 193 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 UGT2B15P54855 530 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 MEF2AQ02078 507 aaPredicted RBP15.17■□□□□ 0.02
NPHP4-211ENST00000622020 PTSQ03393 145 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 LRRC74AQ0VAA2 488 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 LACC1Q8IV20 430 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 KBTBD8Q8NFY9 601 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 ASB11Q8WXH4 323 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 MGLLQ99685 303 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 SLC12A9Q9BXP2 914 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 TIGARQ9NQ88 270 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 ZDHHC3Q9NYG2 299 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 UNC80Q8N2C7 3258 aa15.17■□□□□ 0.02
NPHP4-211ENST00000622020 TRBV5-4A0A0C4DH59 114 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms