RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 VWC2Q2TAL6 325 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 C2orf76Q3KRA6 126 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 TCP11X2Q5H9J9 407 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 DCLRE1AQ6PJP8 1040 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 CAMKMTQ7Z624 323 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 TMEM110Q86TL2 294 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 SLC47A2Q86VL8 602 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 IPMKQ8NFU5 416 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 TSPAN14Q8NG11 270 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 LRRC15Q8TF66 581 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 CHPT1Q8WUD6 406 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 ATL1Q8WXF7 558 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 ZNF75CPQ92670 426 aaPredicted RBP3.53□□□□□ -1.84
BRCA1-229ENST00000621897 EXOC4Q96A65 974 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 MOB3AQ96BX8 217 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 SLC45A3Q96JT2 553 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 CABS1Q96KC9 395 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 GAL3ST4Q96RP7 486 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 CITED2Q99967 270 aaPredicted RBP3.53□□□□□ -1.84
BRCA1-229ENST00000621897 OVOL2Q9BRP0 275 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 CCDC106Q9BWC9 280 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 ACAT2Q9BWD1 397 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 SLC2A11Q9BYW1 496 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 MTMR12Q9C0I1 747 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 TNMDQ9H2S6 317 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 NOL11Q9H8H0 719 aaKnown RBP3.53□□□□□ -1.84
BRCA1-229ENST00000621897 CNOT10Q9H9A5 744 aaKnown RBP3.53□□□□□ -1.84
BRCA1-229ENST00000621897 UTP6Q9NYH9 597 aaKnown RBP3.53□□□□□ -1.84
BRCA1-229ENST00000621897 AIPL1Q9NZN9 384 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 ZNF510Q9Y2H8 683 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 WIPI2Q9Y4P8 454 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 RAD54L2Q9Y4B4 1467 aa3.53□□□□□ -1.84
BRCA1-229ENST00000621897 TMEM94Q12767 1356 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 hCG_1809904A0A1W2PP81 198 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 A0A1W2PPE2 198 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 A0A1W2PR64 198 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 CASTOR2A6NHX0 329 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 SHISA7A6NL88 538 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 G3V2L1 256 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 SPRY1O43609 319 aaPredicted RBP3.52□□□□□ -1.85
BRCA1-229ENST00000621897 ZBTB14O43829 449 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 PRPSAP2O60256 369 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 TBX10O75333 385 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 STAM2O75886 525 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 OPN1MWP04001 364 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 ABCB1P08183 1280 aaPredicted RBP3.52□□□□□ -1.85
BRCA1-229ENST00000621897 OPN1MW2P0DN77 364 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 OPN1MW3P0DN78 364 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 PDHA2P29803 388 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 PTGER3P43115 390 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 OR3A2P47893 321 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 LIG4P49917 911 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 GPC3P51654 580 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 ZNF41P51814 821 aaPredicted RBP3.52□□□□□ -1.85
BRCA1-229ENST00000621897 TKTL1P51854 596 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 POLR2LP62875 67 aaKnown RBP3.52□□□□□ -1.85
BRCA1-229ENST00000621897 YWHAHQ04917 246 aaPredicted RBP3.52□□□□□ -1.85
BRCA1-229ENST00000621897 CD300CQ08708 224 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 KLHL30Q0D2K2 578 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 TRAP1Q12931 704 aaKnown RBP3.52□□□□□ -1.85
BRCA1-229ENST00000621897 PRPF4BQ13523 1007 aaKnown RBP3.52□□□□□ -1.85
BRCA1-229ENST00000621897 SHROOM1Q2M3G4 852 aaPredicted RBP3.52□□□□□ -1.85
BRCA1-229ENST00000621897 ZNF674Q2M3X9 581 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 OR4A47Q6IF82 309 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 THNSL1Q8IYQ7 743 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 METTL4Q8N3J2 472 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 DENND6BQ8NEG7 585 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 OR52K2Q8NGK3 314 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 VPS39Q96JC1 886 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 FAM210AQ96ND0 272 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 ATP6V0BQ99437 205 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 MAP3K3Q99759 626 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 CPNE1Q99829 537 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 ZNF577Q9BSK1 485 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 TEX13BQ9BXU2 312 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 PANK2Q9BZ23 570 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 HOXD1Q9GZZ0 328 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 RPAP3Q9H6T3 665 aaPredicted RBP3.52□□□□□ -1.85
BRCA1-229ENST00000621897 COPS7BQ9H9Q2 264 aaPredicted RBP3.52□□□□□ -1.85
BRCA1-229ENST00000621897 LIN28AQ9H9Z2 209 aaKnown RBP3.52□□□□□ -1.85
BRCA1-229ENST00000621897 B3GAT2Q9NPZ5 323 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 THAP10Q9P2Z0 257 aaPredicted RBP3.52□□□□□ -1.85
BRCA1-229ENST00000621897 CPSF3Q9UKF6 684 aaKnown RBP3.52□□□□□ -1.85
BRCA1-229ENST00000621897 HPCAL4Q9UM19 191 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 CHKBQ9Y259 395 aa3.52□□□□□ -1.85
BRCA1-229ENST00000621897 A0A0B4J203 849 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 TRBV4-1A0A0J9YWV2 114 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 ACOD1A6NK06 481 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 CCDC169A6NNP5 214 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 A8MXE2 369 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 NPIPB9F8W1W9 429 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 NEMFO60524 1076 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 KLHL41O60662 606 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 KERAO60938 352 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 CEACAM4O75871 244 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 KRT33AO76009 404 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 HPRP00739 348 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 CSN3P07498 182 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 PRKAR1AP10644 381 aa3.51□□□□□ -1.85
BRCA1-229ENST00000621897 IL10P22301 178 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms