RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 HAT1O14929 419 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 NDUFS4O43181 175 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 SNRNP200O75643 2136 aaKnown RBP20.53■□□□□ 0.88
SPAST-204ENST00000621856 B3GALT4O96024 378 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 HRH2P25021 359 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 RACK1P63244 317 aaKnown RBP20.53■□□□□ 0.88
SPAST-204ENST00000621856 CYP4F3Q08477 520 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 KIR2DS5Q14953 304 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 GTDC1Q4AE62 458 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 KIAA1614Q5VZ46 1190 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 OR8J2Q8NGG1 315 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 ZFPM2Q8WW38 1151 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 SH3GL1Q99961 368 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 ECSITQ9BQ95 431 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 THUMPD3Q9BV44 507 aaKnown RBP20.53■□□□□ 0.88
SPAST-204ENST00000621856 DUSP26Q9BV47 211 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 MUC13Q9H3R2 512 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 MYNNQ9NPC7 610 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 SLC25A37Q9NYZ2 338 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 SNX7Q9UNH6 387 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 CEP192Q8TEP8 1941 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 GABRR3A8MPY1 467 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 CLEC3AO75596 197 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 TBX6O95947 436 aaPredicted RBP20.53■□□□□ 0.88
SPAST-204ENST00000621856 GSNP06396 782 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 C8BP07358 591 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 LAMP1P11279 417 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 ATP6V1B2P21281 511 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 GCKP35557 465 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 VHLP40337 213 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 BCL6P41182 706 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 C2orf80Q0P641 193 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 KIR2DS3Q14952 304 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 DUOXA1Q1HG43 343 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 RUNDC3AQ59EK9 446 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 CCNYL2Q5T2Q4 361 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 LRIF1Q5T3J3 769 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 PAGE2Q7Z2X7 111 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 MSRB3Q8IXL7 192 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 FAM46DQ8NEK8 389 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 OR10G6Q8NH81 332 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 SLC37A2Q8TED4 501 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 NRG4Q8WWG1 115 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 ZUFSPQ96AP4 578 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 GBP5Q96PP8 586 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 LRRC61Q9BV99 259 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 REEP4Q9H6H4 257 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 SH3BP4Q9P0V3 963 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 ACTR3BQ9P1U1 418 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 KLHL20Q9Y2M5 609 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 PCDHB14Q9Y5E9 798 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 SNX13Q9Y5W8 968 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 ARHGAP10A1A4S6 786 aa20.52■□□□□ 0.88
SPAST-204ENST00000621856 OR6C74A6NCV1 312 aa20.52■□□□□ 0.88
SPAST-204ENST00000621856 K7ESF4 209 aa20.52■□□□□ 0.88
SPAST-204ENST00000621856 PIM1P11309 404 aaPredicted RBP20.52■□□□□ 0.88
SPAST-204ENST00000621856 SOX11P35716 441 aa20.52■□□□□ 0.88
SPAST-204ENST00000621856 GRIA3P42263 894 aa20.52■□□□□ 0.88
SPAST-204ENST00000621856 CDKN2CP42773 168 aa20.52■□□□□ 0.88
SPAST-204ENST00000621856 WNT3P56703 355 aa20.52■□□□□ 0.88
SPAST-204ENST00000621856 TAS2R50P59544 299 aa20.52■□□□□ 0.88
SPAST-204ENST00000621856 UBE2IP63279 158 aaKnown RBP20.52■□□□□ 0.88
SPAST-204ENST00000621856 IQCHQ86VS3 1027 aa20.52■□□□□ 0.88
SPAST-204ENST00000621856 RGMAQ96B86 450 aa20.52■□□□□ 0.88
SPAST-204ENST00000621856 QRFPRQ96P65 431 aa20.52■□□□□ 0.88
SPAST-204ENST00000621856 TM9SF3Q9HD45 589 aa20.52■□□□□ 0.88
SPAST-204ENST00000621856 ATP6V1HQ9UI12 483 aa20.52■□□□□ 0.88
SPAST-204ENST00000621856 AP3M1Q9Y2T2 418 aa20.52■□□□□ 0.88
SPAST-204ENST00000621856 GSAPA4D1B5 854 aa20.51■□□□□ 0.87
SPAST-204ENST00000621856 TLR4O00206 839 aa20.51■□□□□ 0.87
SPAST-204ENST00000621856 RTCAO00442 366 aaKnown RBP20.51■□□□□ 0.87
SPAST-204ENST00000621856 ARPC2O15144 300 aa20.51■□□□□ 0.87
SPAST-204ENST00000621856 NVLO15381 856 aaKnown RBP20.51■□□□□ 0.87
SPAST-204ENST00000621856 CPSF4O95639 269 aaKnown RBP20.51■□□□□ 0.87
SPAST-204ENST00000621856 POLR2CP19387 275 aaPredicted RBP20.51■□□□□ 0.87
SPAST-204ENST00000621856 BCKDHBP21953 392 aa20.51■□□□□ 0.87
SPAST-204ENST00000621856 HTR1EP28566 365 aa20.51■□□□□ 0.87
SPAST-204ENST00000621856 RPL3P39023 403 aaKnown RBP20.51■□□□□ 0.87
SPAST-204ENST00000621856 TRPC1P48995 793 aa20.51■□□□□ 0.87
SPAST-204ENST00000621856 RHDQ02161 417 aa20.51■□□□□ 0.87
SPAST-204ENST00000621856 ANXA8L1Q5VT79 327 aa20.51■□□□□ 0.87
SPAST-204ENST00000621856 LCN8Q6JVE9 175 aa20.51■□□□□ 0.87
SPAST-204ENST00000621856 R3HCC1LQ7Z5L2 792 aaKnown RBP20.51■□□□□ 0.87
SPAST-204ENST00000621856 CAMKMTQ7Z624 323 aa20.51■□□□□ 0.87
SPAST-204ENST00000621856 SFTPA2Q8IWL1 248 aa20.51■□□□□ 0.87
SPAST-204ENST00000621856 NAGSQ8N159 534 aa20.51■□□□□ 0.87
SPAST-204ENST00000621856 CREB3L4Q8TEY5 395 aa20.51■□□□□ 0.87
SPAST-204ENST00000621856 ZDHHC1Q8WTX9 485 aa20.51■□□□□ 0.87
SPAST-204ENST00000621856 MIEF2Q96C03 454 aa20.51■□□□□ 0.87
SPAST-204ENST00000621856 PANX1Q96RD7 426 aa20.51■□□□□ 0.87
SPAST-204ENST00000621856 SLC6A13Q9NSD5 602 aa20.51■□□□□ 0.87
SPAST-204ENST00000621856 SPASTQ9UBP0 616 aa20.51■□□□□ 0.87
SPAST-204ENST00000621856 USP22Q9UPT9 525 aa20.51■□□□□ 0.87
SPAST-204ENST00000621856 BTBD3Q9Y2F9 522 aa20.51■□□□□ 0.87
SPAST-204ENST00000621856 TRBV5-3A0A0A0MS03 114 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 TCRBV3S1A0A5B6 114 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 B4DGG1 531 aa20.5■□□□□ 0.87
SPAST-204ENST00000621856 CAPN5O15484 640 aaPredicted RBP20.5■□□□□ 0.87
SPAST-204ENST00000621856 ZW10O43264 779 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms