RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 MTFMTQ96DP5 389 aaKnown RBP7.42□□□□□ -1.22
CLK1-215ENST00000621181 MVB12AQ96EY5 273 aa7.42□□□□□ -1.22
CLK1-215ENST00000621181 FOPNLQ96NB1 174 aa7.42□□□□□ -1.22
CLK1-215ENST00000621181 ACAT2Q9BWD1 397 aa7.42□□□□□ -1.22
CLK1-215ENST00000621181 GPAMQ9HCL2 828 aa7.42□□□□□ -1.22
CLK1-215ENST00000621181 MKL2Q9ULH7 1088 aa7.42□□□□□ -1.22
CLK1-215ENST00000621181 RUVBL2Q9Y230 463 aaKnown RBP7.42□□□□□ -1.22
CLK1-215ENST00000621181 AKAP9Q99996 3911 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 KRT87PA6NCN2 255 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 A8MUI8 341 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 H0YGG7 62 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 C19orf84I3L1E1 186 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 DNALI1O14645 258 aaPredicted RBP7.41□□□□□ -1.22
CLK1-215ENST00000621181 PRMT5O14744 637 aaPredicted RBP7.41□□□□□ -1.22
CLK1-215ENST00000621181 PSMD3O43242 534 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 CDH16O75309 829 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 CLDN14O95500 239 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 C1orf105O95561 183 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 MLYCDO95822 493 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 VIMP08670 466 aaKnown RBP7.41□□□□□ -1.22
CLK1-215ENST00000621181 C8orf89P0DMQ9 161 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 TAC1P20366 129 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 PSMA3P25788 255 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 AOAHP28039 575 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 CMPK1P30085 196 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 MAGEA4P43358 317 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 ARF3P61204 181 aaPredicted RBP7.41□□□□□ -1.22
CLK1-215ENST00000621181 NCALDP61601 193 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 CDH17Q12864 832 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 BNIP1Q12981 228 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 TSTA3Q13630 321 aaPredicted RBP7.41□□□□□ -1.22
CLK1-215ENST00000621181 PRTGQ2VWP7 1150 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 ZNF766Q5HY98 468 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 RGS9BPQ6ZS82 235 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 OTOAQ7RTW8 1153 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 CDH24Q86UP0 819 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 TRABD2AQ86V40 505 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 CSNK1A1LQ8N752 337 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 OR2A1Q8NGT9 310 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 SLC35B2Q8TB61 432 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 METTL21AQ8WXB1 218 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 RERGQ96A58 199 aaPredicted RBP7.41□□□□□ -1.22
CLK1-215ENST00000621181 PANX3Q96QZ0 392 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 TMEM121Q9BTD3 319 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 DPH7Q9BTV6 452 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 TUBB6Q9BUF5 446 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 DRC3Q9H069 523 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 NSRP1Q9H0G5 558 aaKnown RBP7.41□□□□□ -1.22
CLK1-215ENST00000621181 ZNF700Q9H0M5 742 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 TSPAN10Q9H1Z9 355 aaPredicted RBP7.41□□□□□ -1.22
CLK1-215ENST00000621181 YY1AP1Q9H869 796 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 MKKSQ9NPJ1 570 aaPredicted RBP7.41□□□□□ -1.22
CLK1-215ENST00000621181 FGFR1OP2Q9NVK5 253 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 PLA2G2EQ9NZK7 142 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 SLC2A6Q9UGQ3 507 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 KLK4Q9Y5K2 254 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 HEATR5BQ9P2D3 2071 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 LOC102723996A0A087X1L8 192 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 OR2A25A4D2G3 310 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 WISP2O76076 250 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 UBOX5O94941 541 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 ZSCAN5DPP0CG00 497 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 ATP5DP30049 168 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 SLC26A3P40879 764 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 CCNFP41002 786 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 KIR3DL1P43629 444 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 TTPAP49638 278 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 GDF10P55107 478 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 KRTAP10-9P60411 292 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 TLE4Q04727 773 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 MGAT5Q09328 741 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 CBLBQ13191 982 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 PCOLCEQ15113 449 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 CDSNQ15517 529 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 TESK1Q15569 626 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 HKDC1Q2TB90 917 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 BTBD16Q32M84 506 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 CCSMST1Q4G0I0 132 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 KRTCAP3Q53RY4 240 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 TSTD2Q5T7W7 516 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 RNASEH2BQ5TBB1 312 aaKnown RBP7.41□□□□□ -1.22
CLK1-215ENST00000621181 MFSD4BQ5TF39 518 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 LRRC8BQ6P9F7 803 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 PPP1R21Q6ZMI0 780 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 LDB1Q86U70 411 aaPredicted RBP7.41□□□□□ -1.22
CLK1-215ENST00000621181 SPPL2CQ8IUH8 684 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 AMER3Q8N944 861 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 HMGCLL1Q8TB92 370 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 ADAMTS18Q8TE60 1221 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 THAP3Q8WTV1 239 aaPredicted RBP7.41□□□□□ -1.22
CLK1-215ENST00000621181 C14orf79Q96F83 325 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 MAGEB18Q96M61 343 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 ZNF778Q96MU6 729 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 TMUB1Q9BVT8 246 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 TGIF2Q9GZN2 237 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 MRPS30Q9NP92 439 aaKnown RBP7.41□□□□□ -1.22
CLK1-215ENST00000621181 KLHL1Q9NR64 748 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 ANKRD10Q9NXR5 420 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 UTP6Q9NYH9 597 aaKnown RBP7.41□□□□□ -1.22
CLK1-215ENST00000621181 SAMD15Q9P1V8 674 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms