RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 TIAL1Q01085 375 aaKnown RBP eCLIP8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 BNIP3Q12983 259 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 TAF1AQ15573 450 aaPredicted RBP8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 NDUFA9Q16795 377 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 DEFB110Q30KQ9 67 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 SLC36A3Q495N2 470 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 CDC73Q6P1J9 531 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 SNX20Q7Z614 316 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 MRPL10Q7Z7H8 261 aaKnown RBP8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 MFSD2AQ8NA29 543 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 CHST14Q8NCH0 376 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 OR4K1Q8NGD4 311 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 DUS3LQ96G46 650 aaKnown RBP8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 PLEKHG4BQ96PX9 1271 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 TBX5Q99593 518 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 FEM1AQ9BSK4 669 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 PLGRKTQ9HBL7 147 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 AIG1Q9NVV5 245 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 NKIRAS2Q9NYR9 191 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 PCDHA9Q9Y5H5 950 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 LCHNA4D1U4 455 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 DLGAP1O14490 977 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 TPD52L2O43399 206 aaKnown RBP8□□□□□ -1.13
PTPDC1-204ENST00000620992 ZNF623O75123 536 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 STC2O76061 302 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 SOX30O94993 753 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 SOX6P35712 828 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 RGRP47804 291 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 LAPTM4AQ15012 233 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 C18orf21Q32NC0 220 aaPredicted RBP8□□□□□ -1.13
PTPDC1-204ENST00000620992 CLLU1OSQ5K130 101 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 PSAPL1Q6NUJ1 521 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 ZNF544Q6NX49 715 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 PIANPQ8IYJ0 282 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 LMNTD1Q8N9Z9 388 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 NLGN4YQ8NFZ3 816 aaPredicted RBP8□□□□□ -1.13
PTPDC1-204ENST00000620992 GIPC3Q8TF64 312 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 C2orf15Q8WU43 125 aaKnown RBP8□□□□□ -1.13
PTPDC1-204ENST00000620992 MUS81Q96NY9 551 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 C17orf62Q9BQA9 187 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 NPLQ9BXD5 320 aaPredicted RBP8□□□□□ -1.13
PTPDC1-204ENST00000620992 DERL2Q9GZP9 239 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 EHD3Q9NZN3 535 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 CXXC1Q9P0U4 656 aaPredicted RBP8□□□□□ -1.13
PTPDC1-204ENST00000620992 IFT80Q9P2H3 777 aaPredicted RBP8□□□□□ -1.13
PTPDC1-204ENST00000620992 ASB1Q9Y576 335 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 PCDHGA11Q9Y5H2 935 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 LOC730098B7Z3J9 87 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 RTCAO00442 366 aaKnown RBP8□□□□□ -1.13
PTPDC1-204ENST00000620992 PRAMEF11O60813 436 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 ERN1O75460 977 aaKnown RBP8□□□□□ -1.13
PTPDC1-204ENST00000620992 VARSP26640 1264 aaKnown RBP8□□□□□ -1.13
PTPDC1-204ENST00000620992 CD70P32970 193 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 IST1P53990 364 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 ERVK-8P63133 956 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 RCAN2Q14206 197 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 AAK1Q2M2I8 961 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 ANKDD1AQ495B1 522 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 C6orf136Q5SQH8 315 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 SHISA6Q6ZSJ9 500 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 SPATC1Q76KD6 591 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 HDDC2Q7Z4H3 204 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 TSPAN33Q86UF1 283 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 C8orf59Q8N0T1 100 aaPredicted RBP8□□□□□ -1.13
PTPDC1-204ENST00000620992 C19orf18Q8NEA5 215 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 OR6K6Q8NGW6 343 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 OR2T11Q8NH01 316 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 GRHL3Q8TE85 626 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 STARD8Q92502 1023 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 C1GALT1C1Q96EU7 318 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 ZNF599Q96NL3 588 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 COL21A1Q96P44 957 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 ARHGAP9Q9BRR9 750 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 TMEM165Q9HC07 324 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 ANKHQ9HCJ1 492 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 ABCB9Q9NP78 766 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 FNIP2Q9P278 1114 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 TMEM150CB9EJG8 249 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 MID1O15344 667 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 SLC16A5O15375 505 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 TSPAN6O43657 245 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 BCL10O95999 233 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 SERPINA1P01009 418 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 G6PDP11413 515 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 GSTM5P46439 218 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 HTR6P50406 440 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 NAA20P61599 178 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 STXBP1P61764 594 aaKnown RBP8□□□□□ -1.13
PTPDC1-204ENST00000620992 TMEM115Q12893 351 aaPredicted RBP8□□□□□ -1.13
PTPDC1-204ENST00000620992 SUZ12Q15022 739 aaKnown RBP8□□□□□ -1.13
PTPDC1-204ENST00000620992 DHCR24Q15392 516 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 SNAPC1Q16533 368 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 PERM1Q5SV97 790 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 C1orf189Q5VU69 101 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 TBPL2Q6SJ96 375 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 OR10H5Q8NGA6 315 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 RAB8BQ92930 207 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 C8orf48Q96LL4 319 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 TGM7Q96PF1 710 aa8□□□□□ -1.13
PTPDC1-204ENST00000620992 HHIPQ96QV1 700 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms