RNA–Protein interactions for RNA: ENST00000620828.4

FMR1-217, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best)

Gene FMR1, Length 4,830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-217ENST00000620828 CHERPQ8IWX8 916 aaKnown RBP5.36□□□□□ -1.55
FMR1-217ENST00000620828 MYO1HQ8N1T3 1032 aa5.36□□□□□ -1.55
FMR1-217ENST00000620828 CSNK1A1LQ8N752 337 aa5.36□□□□□ -1.55
FMR1-217ENST00000620828 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.36□□□□□ -1.55
FMR1-217ENST00000620828 FCRL1Q96LA6 429 aa5.36□□□□□ -1.55
FMR1-217ENST00000620828 FOPNLQ96NB1 174 aa5.36□□□□□ -1.55
FMR1-217ENST00000620828 PRAP1Q96NZ9 151 aa5.36□□□□□ -1.55
FMR1-217ENST00000620828 C17orf62Q9BQA9 187 aa5.36□□□□□ -1.55
FMR1-217ENST00000620828 ZBTB20Q9HC78 741 aaPredicted RBP5.36□□□□□ -1.55
FMR1-217ENST00000620828 MKKSQ9NPJ1 570 aaPredicted RBP5.36□□□□□ -1.55
FMR1-217ENST00000620828 SNX15Q9NRS6 342 aa5.36□□□□□ -1.55
FMR1-217ENST00000620828 PCDHGB6Q9Y5F9 930 aa5.36□□□□□ -1.55
FMR1-217ENST00000620828 TCRBV16S1A1N1A0A5B0 115 aa5.36□□□□□ -1.55
FMR1-217ENST00000620828 E5RI56 91 aa5.36□□□□□ -1.55
FMR1-217ENST00000620828 H0YIV9 168 aa5.36□□□□□ -1.55
FMR1-217ENST00000620828 ADAM10O14672 748 aa5.36□□□□□ -1.55
FMR1-217ENST00000620828 IGHEP01854 428 aa5.36□□□□□ -1.55
FMR1-217ENST00000620828 SERPINA6P08185 405 aa5.36□□□□□ -1.55
FMR1-217ENST00000620828 RPA3P35244 121 aaPredicted RBP5.36□□□□□ -1.55
FMR1-217ENST00000620828 TDGF1P3P51864 188 aa5.36□□□□□ -1.55
FMR1-217ENST00000620828 VSX2P58304 361 aaPredicted RBP5.36□□□□□ -1.55
FMR1-217ENST00000620828 ERCC6LQ2NKX8 1250 aa5.36□□□□□ -1.55
FMR1-217ENST00000620828 QSOX2Q6ZRP7 698 aa5.36□□□□□ -1.55
FMR1-217ENST00000620828 CMC1Q7Z7K0 106 aa5.36□□□□□ -1.55
FMR1-217ENST00000620828 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.36□□□□□ -1.55
FMR1-217ENST00000620828 TMEM52Q8NDY8 209 aa5.36□□□□□ -1.55
FMR1-217ENST00000620828 FDCSPQ8NFU4 85 aa5.36□□□□□ -1.55
FMR1-217ENST00000620828 MCOLN3Q8TDD5 553 aa5.36□□□□□ -1.55
FMR1-217ENST00000620828 SCMH1Q96GD3 660 aa5.36□□□□□ -1.55
FMR1-217ENST00000620828 NTMT1Q9BV86 223 aa5.36□□□□□ -1.55
FMR1-217ENST00000620828 ZBTB26Q9HCK0 441 aa5.36□□□□□ -1.55
FMR1-217ENST00000620828 ZNF304Q9HCX3 659 aa5.36□□□□□ -1.55
FMR1-217ENST00000620828 PRDM9Q9NQV7 894 aa5.36□□□□□ -1.55
FMR1-217ENST00000620828 C1GALT1C1LP0DN25 315 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 TRAF3Q13114 568 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 GRHL2Q6ISB3 625 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 ZNF793Q6ZN11 406 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 TRMT10CQ7L0Y3 403 aaKnown RBP5.35□□□□□ -1.55
FMR1-217ENST00000620828 ANKRD37Q7Z713 158 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 TAX1BP1Q86VP1 789 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 KCT2Q8NC54 265 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 RNF138Q8WVD3 245 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 ATL1Q8WXF7 558 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 TRIM31Q9BZY9 425 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 VN1R1Q9GZP7 353 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 EPN3Q9H201 632 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 SLC39A10Q9ULF5 831 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 CCL27Q9Y4X3 112 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 FLNCQ14315 2725 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 CACNA1BQ00975 2339 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 CDC14CA4D256 554 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 STX16-NPEPL1H3BU86 382 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 MASP2O00187 686 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 TXNDC9O14530 226 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 STX16O14662 325 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 CLEC3AO75596 197 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 C2P06681 752 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 RGS4P49798 205 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 CCR8P51685 355 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 RUNX2Q13950 521 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 COL9A2Q14055 689 aaPredicted RBP5.35□□□□□ -1.55
FMR1-217ENST00000620828 ERV3-1Q14264 604 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 CEBPEQ15744 281 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 CAPN13Q6MZZ7 669 aaPredicted RBP5.35□□□□□ -1.55
FMR1-217ENST00000620828 C8orf74Q6P047 294 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 C6orf89Q6UWU4 347 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 LGI4Q8N135 537 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 MREGQ8N565 214 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 MDS2Q8NDY4 140 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 STT3BQ8TCJ2 826 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 NXNL1Q96CM4 212 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 L3HYPDHQ96EM0 354 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 TMEM109Q9BVC6 243 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 MS4A8Q9BY19 250 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 SOHLH2Q9NX45 425 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 LNPEPQ9UIQ6 1025 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 PCTPQ9UKL6 214 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 UTP20O75691 2785 aaKnown RBP5.35□□□□□ -1.55
FMR1-217ENST00000620828 A0A0A6YYD5 115 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 G3V2L1 256 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 IPO13O94829 963 aaKnown RBP5.35□□□□□ -1.55
FMR1-217ENST00000620828 CNTFP26441 200 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 VARSP26640 1264 aaKnown RBP5.35□□□□□ -1.55
FMR1-217ENST00000620828 TRHRP34981 398 aaPredicted RBP5.35□□□□□ -1.55
FMR1-217ENST00000620828 SLC18A2Q05940 514 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 NAE1Q13564 534 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 DEFB109BQ30KR1 87 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 ASPGQ86U10 573 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 CFAP61Q8NHU2 1237 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 ANAPC2Q9UJX6 822 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 SLC22A14Q9Y267 594 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 KNTC1P50748 2209 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 CACNA1GO43497 2377 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 FOXE1O00358 373 aaPredicted RBP5.35□□□□□ -1.55
FMR1-217ENST00000620828 PHGDHO43175 533 aaKnown RBP5.35□□□□□ -1.55
FMR1-217ENST00000620828 LTA4HP09960 611 aaKnown RBP5.35□□□□□ -1.55
FMR1-217ENST00000620828 NUDT17P0C025 328 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 CCDC166P0CW27 439 aa5.35□□□□□ -1.55
FMR1-217ENST00000620828 SPRP35270 261 aaPredicted RBP5.35□□□□□ -1.55
FMR1-217ENST00000620828 TSFMP43897 325 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms