RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 C9orf43Q8TAL5 461 aaPredicted RBP18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 WFDC5Q8TCV5 224 aa18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 ALG14Q96F25 216 aa18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 RNF38Q9H0F5 515 aa18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 MARCH7Q9H992 704 aa18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 ZDHHC3Q9NYG2 299 aa18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 BTNL2Q9UIR0 455 aa18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 DUSP12Q9UNI6 340 aa18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 ANAPC1Q9H1A4 1944 aa18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 CAPN5O15484 640 aaPredicted RBP18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 HOXC11O43248 304 aaPredicted RBP18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 PCDH7O60245 1069 aa18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 ADAMTS4O75173 837 aa18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 KRT75O95678 551 aa18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 CDH12P55289 794 aa18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 SPIBQ01892 262 aa18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 MICAQ29983 383 aa18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 CHTF18Q8WVB6 975 aa18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 SNX18Q96RF0 628 aa18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 P2RY13Q9BPV8 354 aa18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 CDCA4Q9BXL8 241 aa18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 VPS29Q9UBQ0 182 aa18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 MBD1Q9UIS9 605 aaPredicted RBP18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 CORO2BQ9UQ03 480 aa18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 RUVBL1Q9Y265 456 aaKnown RBP18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 SNX8Q9Y5X2 465 aa18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 PRAMEF25A6NGN4 478 aa18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 EIF3FO00303 357 aaPredicted RBP18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 AP3D1O14617 1153 aa18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 ABCB1P08183 1280 aaPredicted RBP18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 HIST1H2AGP0C0S8 130 aaPredicted RBP18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 HIST1H2ADP20671 130 aa18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 SEMG2Q02383 582 aa18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 HSPA14Q0VDF9 509 aa18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 GPR50Q13585 617 aa18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 MBTPS1Q14703 1052 aa18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 KCNA10Q16322 511 aa18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 TMC5Q6UXY8 1006 aa18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 NRARPQ7Z6K4 114 aa18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 C11orf65Q8NCR3 313 aa18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 PSD4Q8NDX1 1056 aa18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 C2orf15Q8WU43 125 aaKnown RBP18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 SKA2Q8WVK7 121 aaPredicted RBP18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 C11orf24Q96F05 449 aaPredicted RBP18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 HIST1H2AHQ96KK5 128 aa18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 MGLLQ99685 303 aa18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 HIST1H2AJQ99878 128 aa18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 H2AFJQ9BTM1 129 aa18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 ROGDIQ9GZN7 287 aa18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 NMRK2Q9NPI5 230 aa18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 IMPAD1Q9NX62 359 aa18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 HCSTQ9UBK5 93 aa18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 A0A075B6Q4 140 aa18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 GABRR3A8MPY1 467 aa18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 PPIBP23284 216 aaKnown RBP18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 CXCR2P25025 360 aa18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 TNFSF8P32971 234 aa18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 OR1E2P47887 323 aa18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 TEAD4Q15561 434 aa18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 TAF1CQ15572 869 aaPredicted RBP18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 SSX1Q16384 188 aa18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 CLPPQ16740 277 aaPredicted RBP18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 LRRC66Q68CR7 880 aa18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 FUT10Q6P4F1 479 aa18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 PRSS55Q6UWB4 352 aaPredicted RBP18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 OR9Q2Q8NGE9 314 aa18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 WDR20Q8TBZ3 569 aa18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 BBS2Q9BXC9 721 aa18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 KLF16Q9BXK1 252 aaPredicted RBP18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 ATG10Q9H0Y0 220 aa18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 SPATA6Q9NWH7 488 aaPredicted RBP18.84■□□□□ 0.61
PDLIM3-212ENST00000620787 NPIPB15A6NHN6 443 aaPredicted RBP18.83■□□□□ 0.61
PDLIM3-212ENST00000620787 ARHGAP33O14559 1287 aa18.83■□□□□ 0.61
PDLIM3-212ENST00000620787 ADAM12O43184 909 aa18.83■□□□□ 0.61
PDLIM3-212ENST00000620787 GPX5O75715 221 aa18.83■□□□□ 0.61
PDLIM3-212ENST00000620787 SLITRK5O94991 958 aa18.83■□□□□ 0.61
PDLIM3-212ENST00000620787 PTX3P26022 381 aaPredicted RBP18.83■□□□□ 0.61
PDLIM3-212ENST00000620787 PFN3P60673 137 aa18.83■□□□□ 0.61
PDLIM3-212ENST00000620787 STARD3Q14849 445 aa18.83■□□□□ 0.61
PDLIM3-212ENST00000620787 MED22Q15528 200 aa18.83■□□□□ 0.61
PDLIM3-212ENST00000620787 TIMM50Q3ZCQ8 353 aa18.83■□□□□ 0.61
PDLIM3-212ENST00000620787 NPAS3Q8IXF0 933 aa18.83■□□□□ 0.61
PDLIM3-212ENST00000620787 OVCA2Q8WZ82 227 aa18.83■□□□□ 0.61
PDLIM3-212ENST00000620787 CEP19Q96LK0 163 aa18.83■□□□□ 0.61
PDLIM3-212ENST00000620787 NEDD4LQ96PU5 975 aa18.83■□□□□ 0.61
PDLIM3-212ENST00000620787 MTERF1Q99551 399 aaKnown RBP18.83■□□□□ 0.61
PDLIM3-212ENST00000620787 COPS8Q99627 209 aa18.83■□□□□ 0.61
PDLIM3-212ENST00000620787 TAPBPLQ9BX59 468 aa18.83■□□□□ 0.61
PDLIM3-212ENST00000620787 SMURF1Q9HCE7 757 aa18.83■□□□□ 0.61
PDLIM3-212ENST00000620787 GRIP1Q9Y3R0 1128 aa18.83■□□□□ 0.61
PDLIM3-212ENST00000620787 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.83■□□□□ 0.6
PDLIM3-212ENST00000620787 CCRL2O00421 344 aa18.83■□□□□ 0.6
PDLIM3-212ENST00000620787 TIE1P35590 1138 aa18.83■□□□□ 0.6
PDLIM3-212ENST00000620787 RAE1P78406 368 aaKnown RBP18.83■□□□□ 0.6
PDLIM3-212ENST00000620787 IFI44LQ53G44 452 aa18.83■□□□□ 0.6
PDLIM3-212ENST00000620787 CPTPQ5TA50 214 aa18.83■□□□□ 0.6
PDLIM3-212ENST00000620787 TAS1R1Q7RTX1 841 aa18.83■□□□□ 0.6
PDLIM3-212ENST00000620787 OR8H2Q8N162 312 aa18.83■□□□□ 0.6
PDLIM3-212ENST00000620787 FLCNQ8NFG4 579 aa18.83■□□□□ 0.6
PDLIM3-212ENST00000620787 TMCO6Q96DC7 493 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms