RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 SLC22A7Q9Y694 548 aa20.8■□□□□ 0.92
SRRT-218ENST00000620394 CELSR1Q9NYQ6 3014 aa20.8■□□□□ 0.92
SRRT-218ENST00000620394 FEZF1A0PJY2 475 aa20.79■□□□□ 0.92
SRRT-218ENST00000620394 CCL21O00585 134 aa20.79■□□□□ 0.92
SRRT-218ENST00000620394 TP73O15350 636 aa20.79■□□□□ 0.92
SRRT-218ENST00000620394 LCMT2O60294 686 aaKnown RBP20.79■□□□□ 0.92
SRRT-218ENST00000620394 SNRPB2P08579 225 aaKnown RBP20.79■□□□□ 0.92
SRRT-218ENST00000620394 ENO2P09104 434 aaPredicted RBP20.79■□□□□ 0.92
SRRT-218ENST00000620394 SLC35G6P0C7Q6 338 aa20.79■□□□□ 0.92
SRRT-218ENST00000620394 GRK3P35626 688 aa20.79■□□□□ 0.92
SRRT-218ENST00000620394 CA7P43166 264 aa20.79■□□□□ 0.92
SRRT-218ENST00000620394 XCR1P46094 333 aa20.79■□□□□ 0.92
SRRT-218ENST00000620394 SBSNQ6UWP8 590 aa20.79■□□□□ 0.92
SRRT-218ENST00000620394 STRA8Q7Z7C7 330 aa20.79■□□□□ 0.92
SRRT-218ENST00000620394 SLC26A11Q86WA9 606 aa20.79■□□□□ 0.92
SRRT-218ENST00000620394 SHISA5Q8N114 240 aa20.79■□□□□ 0.92
SRRT-218ENST00000620394 AFAP1L2Q8N4X5 818 aa20.79■□□□□ 0.92
SRRT-218ENST00000620394 GPATCH11Q8N954 259 aa20.79■□□□□ 0.92
SRRT-218ENST00000620394 ZCCHC10Q8TBK6 192 aa20.79■□□□□ 0.92
SRRT-218ENST00000620394 SLC13A3Q8WWT9 602 aa20.79■□□□□ 0.92
SRRT-218ENST00000620394 METTL21AQ8WXB1 218 aa20.79■□□□□ 0.92
SRRT-218ENST00000620394 FBXL8Q96CD0 374 aa20.79■□□□□ 0.92
SRRT-218ENST00000620394 CFAP36Q96G28 342 aa20.79■□□□□ 0.92
SRRT-218ENST00000620394 PWWP2AQ96N64 755 aa20.79■□□□□ 0.92
SRRT-218ENST00000620394 OR4K3Q96R72 315 aa20.79■□□□□ 0.92
SRRT-218ENST00000620394 ANKHQ9HCJ1 492 aa20.79■□□□□ 0.92
SRRT-218ENST00000620394 ARL15Q9NXU5 204 aa20.79■□□□□ 0.92
SRRT-218ENST00000620394 HCN3Q9P1Z3 774 aa20.79■□□□□ 0.92
SRRT-218ENST00000620394 C19orf25Q9UFG5 118 aaPredicted RBP20.79■□□□□ 0.92
SRRT-218ENST00000620394 VWA7Q9Y334 891 aa20.79■□□□□ 0.92
SRRT-218ENST00000620394 USP27XA6NNY8 438 aa20.78■□□□□ 0.92
SRRT-218ENST00000620394 SGK494L7N484 410 aa20.78■□□□□ 0.92
SRRT-218ENST00000620394 WFS1O76024 890 aa20.78■□□□□ 0.92
SRRT-218ENST00000620394 SEC31AO94979 1220 aaKnown RBP20.78■□□□□ 0.92
SRRT-218ENST00000620394 UNC5CO95185 931 aa20.78■□□□□ 0.92
SRRT-218ENST00000620394 CRYABP02511 175 aaKnown RBP20.78■□□□□ 0.92
SRRT-218ENST00000620394 ZNF37AP17032 561 aaPredicted RBP20.78■□□□□ 0.92
SRRT-218ENST00000620394 CCR8P51685 355 aa20.78■□□□□ 0.92
SRRT-218ENST00000620394 PGGT1BP53609 377 aa20.78■□□□□ 0.92
SRRT-218ENST00000620394 DR1Q01658 176 aa20.78■□□□□ 0.92
SRRT-218ENST00000620394 PLAG1Q6DJT9 500 aa20.78■□□□□ 0.92
SRRT-218ENST00000620394 LANCL3Q6ZV70 420 aa20.78■□□□□ 0.92
SRRT-218ENST00000620394 CPEB2Q7Z5Q1 589 aaKnown RBP20.78■□□□□ 0.92
SRRT-218ENST00000620394 ATL1Q8WXF7 558 aa20.78■□□□□ 0.92
SRRT-218ENST00000620394 CYTH2Q99418 400 aa20.78■□□□□ 0.92
SRRT-218ENST00000620394 PPANQ9NQ55 473 aaKnown RBP20.78■□□□□ 0.92
SRRT-218ENST00000620394 PLA2G3Q9NZ20 509 aa20.78■□□□□ 0.92
SRRT-218ENST00000620394 ABI3Q9P2A4 366 aa20.78■□□□□ 0.92
SRRT-218ENST00000620394 MED13LQ71F56 2210 aa20.77■□□□□ 0.92
SRRT-218ENST00000620394 TRBC2A0A5B9 178 aa20.77■□□□□ 0.92
SRRT-218ENST00000620394 RDH16O75452 317 aa20.77■□□□□ 0.92
SRRT-218ENST00000620394 IL10P22301 178 aa20.77■□□□□ 0.92
SRRT-218ENST00000620394 AGTR2P50052 363 aa20.77■□□□□ 0.92
SRRT-218ENST00000620394 RBPJQ06330 500 aa20.77■□□□□ 0.92
SRRT-218ENST00000620394 CBLBQ13191 982 aa20.77■□□□□ 0.92
SRRT-218ENST00000620394 PPP1R3AQ16821 1122 aa20.77■□□□□ 0.92
SRRT-218ENST00000620394 MINDY4Q4G0A6 757 aa20.77■□□□□ 0.92
SRRT-218ENST00000620394 ALKBH8Q96BT7 664 aaKnown RBP20.77■□□□□ 0.92
SRRT-218ENST00000620394 PYCR2Q96C36 320 aa20.77■□□□□ 0.92
SRRT-218ENST00000620394 SNF8Q96H20 258 aa20.77■□□□□ 0.92
SRRT-218ENST00000620394 CAPZA3Q96KX2 299 aa20.77■□□□□ 0.92
SRRT-218ENST00000620394 OR1F2PQ96R84 312 aa20.77■□□□□ 0.92
SRRT-218ENST00000620394 TRIM51Q9BSJ1 452 aa20.77■□□□□ 0.92
SRRT-218ENST00000620394 TRIM54Q9BYV2 358 aa20.77■□□□□ 0.92
SRRT-218ENST00000620394 SEC14L3Q9UDX4 400 aa20.77■□□□□ 0.92
SRRT-218ENST00000620394 ITGB1BP2Q9UKP3 347 aa20.77■□□□□ 0.92
SRRT-218ENST00000620394 IKZF3Q9UKT9 509 aa20.77■□□□□ 0.92
SRRT-218ENST00000620394 NCOA6Q14686 2063 aaPredicted RBP20.77■□□□□ 0.92
SRRT-218ENST00000620394 CCDC168Q8NDH2 2452 aa20.76■□□□□ 0.91
SRRT-218ENST00000620394 PABPN1LA6NDY0 278 aaKnown RBP20.76■□□□□ 0.91
SRRT-218ENST00000620394 SEC24DO94855 1032 aaPredicted RBP20.76■□□□□ 0.91
SRRT-218ENST00000620394 WDPCPO95876 746 aa20.76■□□□□ 0.91
SRRT-218ENST00000620394 ITGA8P53708 1063 aa20.76■□□□□ 0.91
SRRT-218ENST00000620394 ARL4CP56559 192 aa20.76■□□□□ 0.91
SRRT-218ENST00000620394 PWP1Q13610 501 aa20.76■□□□□ 0.91
SRRT-218ENST00000620394 HERC3Q15034 1050 aa20.76■□□□□ 0.91
SRRT-218ENST00000620394 HP1BP3Q5SSJ5 553 aaPredicted RBP20.76■□□□□ 0.91
SRRT-218ENST00000620394 XKRXQ6PP77 449 aa20.76■□□□□ 0.91
SRRT-218ENST00000620394 ANKRD37Q7Z713 158 aa20.76■□□□□ 0.91
SRRT-218ENST00000620394 KLHL7Q8IXQ5 586 aa20.76■□□□□ 0.91
SRRT-218ENST00000620394 AMER2Q8N7J2 671 aa20.76■□□□□ 0.91
SRRT-218ENST00000620394 DNAJB8Q8NHS0 232 aa20.76■□□□□ 0.91
SRRT-218ENST00000620394 ANKRD7Q92527 254 aa20.76■□□□□ 0.91
SRRT-218ENST00000620394 LANCL2Q9NS86 450 aa20.76■□□□□ 0.91
SRRT-218ENST00000620394 NAALAD2Q9Y3Q0 740 aa20.76■□□□□ 0.91
SRRT-218ENST00000620394 PSAT1Q9Y617 370 aa20.76■□□□□ 0.91
SRRT-218ENST00000620394 AKAP9Q99996 3911 aa20.75■□□□□ 0.91
SRRT-218ENST00000620394 IGHV3-20A0A0C4DH32 117 aa20.75■□□□□ 0.91
SRRT-218ENST00000620394 OR5H15A6NDH6 313 aa20.75■□□□□ 0.91
SRRT-218ENST00000620394 E7ESA3 106 aa20.75■□□□□ 0.91
SRRT-218ENST00000620394 CCDC188H7C350 402 aa20.75■□□□□ 0.91
SRRT-218ENST00000620394 UQCRHP07919 91 aa20.75■□□□□ 0.91
SRRT-218ENST00000620394 SSTR2P30874 369 aa20.75■□□□□ 0.91
SRRT-218ENST00000620394 CASP6P55212 293 aa20.75■□□□□ 0.91
SRRT-218ENST00000620394 RHAGQ02094 409 aa20.75■□□□□ 0.91
SRRT-218ENST00000620394 KRTAP21-3Q3LHN1 58 aa20.75■□□□□ 0.91
SRRT-218ENST00000620394 ABHD17BQ5VST6 288 aa20.75■□□□□ 0.91
SRRT-218ENST00000620394 H3F3CQ6NXT2 135 aa20.75■□□□□ 0.91
SRRT-218ENST00000620394 ZC3HC1Q86WB0 502 aaKnown RBP20.75■□□□□ 0.91
SRRT-218ENST00000620394 ZNF740Q8NDX6 193 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms