RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 ACPTQ9BZG2 426 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 SLC6A16Q9GZN6 736 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 OR51B5Q9H339 312 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 LRTM1Q9HBL6 345 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 PDE7BQ9NP56 450 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 C1orf109Q9NX04 203 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 SIRT5Q9NXA8 310 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 AHSPQ9NZD4 102 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 TMEM9Q9P0T7 183 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 ATXN7L1Q9ULK2 861 aaPredicted RBP7.67□□□□□ -1.18
CPNE3-209ENST00000620393 SLC12A4Q9UP95 1085 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 MN1Q10571 1320 aaPredicted RBP7.67□□□□□ -1.18
CPNE3-209ENST00000620393 ZFC3H1O60293 1989 aaKnown RBP7.66□□□□□ -1.18
CPNE3-209ENST00000620393 ANKRD12Q6UB98 2062 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 LOC105369274A0A096LPK9 316 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 LOC102723532A0A0G2JNH3 316 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 IGHV5-10-1A0A0J9YXX1 117 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 LRIT2A6NDA9 550 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 UBDO15205 165 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 CCDC22O60826 627 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 SEC22BO75396 215 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 RASSF9O75901 435 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 SEMA3DO95025 777 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 ETHE1O95571 254 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 SERPIND1P05546 499 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 ANKRD34CP0C6C1 535 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 NELFEP18615 380 aaKnown RBP7.66□□□□□ -1.18
CPNE3-209ENST00000620393 GABRA4P48169 554 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 ACADVLP49748 655 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 CYP4F2P78329 520 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 HSD11B2P80365 405 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 NHLH1Q02575 133 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 CYP4F3Q08477 520 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 TBL3Q12788 808 aaKnown RBP7.66□□□□□ -1.18
CPNE3-209ENST00000620393 HYAL2Q12891 473 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 NR6A1Q15406 480 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 ADPRMQ3LIE5 342 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 ATP6AP1LQ52LC2 224 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 RFTN2Q52LD8 501 aaPredicted RBP7.66□□□□□ -1.18
CPNE3-209ENST00000620393 TMEM35AQ53FP2 167 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 SNAP47Q5SQN1 464 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 KHDRBS2Q5VWX1 349 aaKnown RBP7.66□□□□□ -1.18
CPNE3-209ENST00000620393 FRMPD2BQ6IN97 320 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 TMPRSS9Q7Z410 1059 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 VN1R4Q7Z5H5 301 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 GLRX5Q86SX6 157 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 ASPGQ86U10 573 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 MTDHQ86UE4 582 aaKnown RBP7.66□□□□□ -1.18
CPNE3-209ENST00000620393 ZFAND4Q86XD8 727 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 PARP9Q8IXQ6 854 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 OR4N4Q8N0Y3 316 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 METTL4Q8N3J2 472 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 D2HGDHQ8N465 521 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 CPSF7Q8N684 471 aaKnown RBP7.66□□□□□ -1.18
CPNE3-209ENST00000620393 CAMKVQ8NCB2 501 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 NT5CQ8TCD5 201 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 RERGQ96A58 199 aaPredicted RBP7.66□□□□□ -1.18
CPNE3-209ENST00000620393 C11orf24Q96F05 449 aaPredicted RBP7.66□□□□□ -1.18
CPNE3-209ENST00000620393 APIPQ96GX9 242 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 SLC41A2Q96JW4 573 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 ZNF285Q96NJ3 590 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 F2RL3Q96RI0 385 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 GFM1Q96RP9 751 aaKnown RBP7.66□□□□□ -1.18
CPNE3-209ENST00000620393 SPSB2Q99619 263 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 SYNPO2LQ9H987 977 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 PRM3Q9NNZ6 103 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 SAR1AQ9NR31 198 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 GIMAP2Q9UG22 337 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 KLHL3Q9UH77 587 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 TRIM33Q9UPN9 1127 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 PLCL2Q9UPR0 1127 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 PCDHGA1Q9Y5H4 931 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 DMDP11532 3685 aa7.66□□□□□ -1.18
CPNE3-209ENST00000620393 VPS13AQ96RL7 3174 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.65□□□□□ -1.18
CPNE3-209ENST00000620393 A8MU76 341 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 E9PBE3 544 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 TXNDC9O14530 226 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 ZSCAN9O15535 394 aaPredicted RBP7.65□□□□□ -1.18
CPNE3-209ENST00000620393 NDUFS4O43181 175 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 HCRTR1O43613 425 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 KLHL41O60662 606 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 SH3BGRLO75368 114 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 DCTN3O75935 186 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 MSL3P1P0C860 447 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 SMIM10L1P0DMW3 83 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 THRAP10827 490 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 PCSK2P16519 638 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 NCF2P19878 526 aaPredicted RBP7.65□□□□□ -1.18
CPNE3-209ENST00000620393 ADSLP30566 484 aaPredicted RBP7.65□□□□□ -1.18
CPNE3-209ENST00000620393 ARL4DP49703 201 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 SEPHS1P49903 392 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 ARFIP1P53367 373 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 STXBP1P61764 594 aaKnown RBP7.65□□□□□ -1.18
CPNE3-209ENST00000620393 ERVK-8P63133 956 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 IRX1P78414 480 aaPredicted RBP7.65□□□□□ -1.18
CPNE3-209ENST00000620393 ZFP36L1Q07352 338 aaKnown RBP7.65□□□□□ -1.18
CPNE3-209ENST00000620393 RGS1Q08116 209 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 MAD2L1Q13257 205 aaPredicted RBP7.65□□□□□ -1.18
CPNE3-209ENST00000620393 TRA2AQ13595 282 aaKnown RBP eCLIP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms