RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 GPNMBQ14956 572 aa19.64■□□□□ 0.74
NEK3-208ENST00000618534 TCTN1Q2MV58 587 aa19.64■□□□□ 0.74
NEK3-208ENST00000618534 ARMCX4Q5H9R4 360 aa19.64■□□□□ 0.74
NEK3-208ENST00000618534 C1orf52Q8N6N3 182 aaKnown RBP19.64■□□□□ 0.74
NEK3-208ENST00000618534 C11orf65Q8NCR3 313 aa19.64■□□□□ 0.74
NEK3-208ENST00000618534 UTP15Q8TED0 518 aaKnown RBP19.64■□□□□ 0.74
NEK3-208ENST00000618534 C11orf24Q96F05 449 aaPredicted RBP19.64■□□□□ 0.74
NEK3-208ENST00000618534 CEP44Q9C0F1 390 aa19.64■□□□□ 0.74
NEK3-208ENST00000618534 ITM2CQ9NQX7 267 aa19.64■□□□□ 0.74
NEK3-208ENST00000618534 TAS2R16Q9NYV7 291 aa19.64■□□□□ 0.74
NEK3-208ENST00000618534 BTNL2Q9UIR0 455 aa19.64■□□□□ 0.74
NEK3-208ENST00000618534 DNTTP04053 509 aa19.64■□□□□ 0.73
NEK3-208ENST00000618534 C1SP09871 688 aa19.64■□□□□ 0.73
NEK3-208ENST00000618534 GABRB1P18505 474 aa19.64■□□□□ 0.73
NEK3-208ENST00000618534 CD70P32970 193 aa19.64■□□□□ 0.73
NEK3-208ENST00000618534 CDH12P55289 794 aa19.64■□□□□ 0.73
NEK3-208ENST00000618534 SELENOWP63302 87 aa19.64■□□□□ 0.73
NEK3-208ENST00000618534 CAP1Q01518 475 aa19.64■□□□□ 0.73
NEK3-208ENST00000618534 SPIBQ01892 262 aa19.64■□□□□ 0.73
NEK3-208ENST00000618534 ANGPTL8Q6UXH0 198 aa19.64■□□□□ 0.73
NEK3-208ENST00000618534 USP45Q70EL2 814 aa19.64■□□□□ 0.73
NEK3-208ENST00000618534 ZNF605Q86T29 641 aa19.64■□□□□ 0.73
NEK3-208ENST00000618534 METTL4Q8N3J2 472 aa19.64■□□□□ 0.73
NEK3-208ENST00000618534 OR4C15Q8NGM1 316 aa19.64■□□□□ 0.73
NEK3-208ENST00000618534 TRMT2BQ96GJ1 504 aaKnown RBP19.64■□□□□ 0.73
NEK3-208ENST00000618534 MAGEB10Q96LZ2 347 aaPredicted RBP19.64■□□□□ 0.73
NEK3-208ENST00000618534 COL21A1Q96P44 957 aa19.64■□□□□ 0.73
NEK3-208ENST00000618534 SLC16A5O15375 505 aa19.63■□□□□ 0.73
NEK3-208ENST00000618534 AOC2O75106 756 aa19.63■□□□□ 0.73
NEK3-208ENST00000618534 HSMCR30P0CW71 290 aa19.63■□□□□ 0.73
NEK3-208ENST00000618534 ATP1B2P14415 290 aaPredicted RBP19.63■□□□□ 0.73
NEK3-208ENST00000618534 CTSOP43234 321 aaPredicted RBP19.63■□□□□ 0.73
NEK3-208ENST00000618534 RGS6P49758 472 aa19.63■□□□□ 0.73
NEK3-208ENST00000618534 ST3GAL4Q11206 333 aa19.63■□□□□ 0.73
NEK3-208ENST00000618534 EXOC3L2Q2M3D2 409 aa19.63■□□□□ 0.73
NEK3-208ENST00000618534 COX20Q5RI15 118 aa19.63■□□□□ 0.73
NEK3-208ENST00000618534 PLEKHS1Q5SXH7 462 aa19.63■□□□□ 0.73
NEK3-208ENST00000618534 C10orf62Q5T681 223 aaPredicted RBP19.63■□□□□ 0.73
NEK3-208ENST00000618534 TXNDC8Q6A555 127 aa19.63■□□□□ 0.73
NEK3-208ENST00000618534 ZNF852Q6ZMS4 543 aa19.63■□□□□ 0.73
NEK3-208ENST00000618534 THOC6Q86W42 341 aaKnown RBP19.63■□□□□ 0.73
NEK3-208ENST00000618534 LGI4Q8N135 537 aa19.63■□□□□ 0.73
NEK3-208ENST00000618534 RAD9AQ99638 391 aa19.63■□□□□ 0.73
NEK3-208ENST00000618534 PRM3Q9NNZ6 103 aa19.63■□□□□ 0.73
NEK3-208ENST00000618534 SLC6A14Q9UN76 642 aa19.63■□□□□ 0.73
NEK3-208ENST00000618534 CORO2BQ9UQ03 480 aa19.63■□□□□ 0.73
NEK3-208ENST00000618534 BACE2Q9Y5Z0 518 aa19.63■□□□□ 0.73
NEK3-208ENST00000618534 TET1Q8NFU7 2136 aa19.63■□□□□ 0.73
NEK3-208ENST00000618534 HAT1O14929 419 aa19.63■□□□□ 0.73
NEK3-208ENST00000618534 ANXA4P09525 319 aaPredicted RBP19.63■□□□□ 0.73
NEK3-208ENST00000618534 PPIBP23284 216 aaKnown RBP19.63■□□□□ 0.73
NEK3-208ENST00000618534 CRATP43155 626 aa19.63■□□□□ 0.73
NEK3-208ENST00000618534 LIMK1P53667 647 aa19.63■□□□□ 0.73
NEK3-208ENST00000618534 SF3B4Q15427 424 aaKnown RBP eCLIP19.63■□□□□ 0.73
NEK3-208ENST00000618534 FBXO43Q4G163 708 aa19.63■□□□□ 0.73
NEK3-208ENST00000618534 KIAA1841Q6NSI8 718 aa19.63■□□□□ 0.73
NEK3-208ENST00000618534 OR4A15Q8NGL6 344 aa19.63■□□□□ 0.73
NEK3-208ENST00000618534 ZNF461Q8TAF7 563 aa19.63■□□□□ 0.73
NEK3-208ENST00000618534 CCM2Q9BSQ5 444 aa19.63■□□□□ 0.73
NEK3-208ENST00000618534 HOXD1Q9GZZ0 328 aa19.63■□□□□ 0.73
NEK3-208ENST00000618534 POFUT2Q9Y2G5 429 aa19.63■□□□□ 0.73
NEK3-208ENST00000618534 PRAMEF25A6NGN4 478 aa19.62■□□□□ 0.73
NEK3-208ENST00000618534 ASNA1O43681 348 aa19.62■□□□□ 0.73
NEK3-208ENST00000618534 UGDHO60701 494 aa19.62■□□□□ 0.73
NEK3-208ENST00000618534 ETFAP13804 333 aa19.62■□□□□ 0.73
NEK3-208ENST00000618534 IDSP22304 550 aa19.62■□□□□ 0.73
NEK3-208ENST00000618534 TEAD4Q15561 434 aa19.62■□□□□ 0.73
NEK3-208ENST00000618534 GPR156Q8NFN8 814 aa19.62■□□□□ 0.73
NEK3-208ENST00000618534 OR9Q2Q8NGE9 314 aa19.62■□□□□ 0.73
NEK3-208ENST00000618534 ELMO1Q92556 727 aa19.62■□□□□ 0.73
NEK3-208ENST00000618534 YIPF2Q9BWQ6 316 aa19.62■□□□□ 0.73
NEK3-208ENST00000618534 BRD9Q9H8M2 597 aa19.62■□□□□ 0.73
NEK3-208ENST00000618534 ABCB8Q9NUT2 735 aa19.62■□□□□ 0.73
NEK3-208ENST00000618534 IFT52Q9Y366 437 aa19.62■□□□□ 0.73
NEK3-208ENST00000618534 PSMD11O00231 422 aa19.62■□□□□ 0.73
NEK3-208ENST00000618534 SELPP16109 830 aa19.62■□□□□ 0.73
NEK3-208ENST00000618534 CASP3P42574 277 aa19.62■□□□□ 0.73
NEK3-208ENST00000618534 NR4A2P43354 598 aa19.62■□□□□ 0.73
NEK3-208ENST00000618534 UGT2B15P54855 530 aa19.62■□□□□ 0.73
NEK3-208ENST00000618534 VEPH1Q14D04 833 aa19.62■□□□□ 0.73
NEK3-208ENST00000618534 CYP27C1Q4G0S4 372 aa19.62■□□□□ 0.73
NEK3-208ENST00000618534 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.62■□□□□ 0.73
NEK3-208ENST00000618534 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.62■□□□□ 0.73
NEK3-208ENST00000618534 DNAJB7Q7Z6W7 309 aaPredicted RBP19.62■□□□□ 0.73
NEK3-208ENST00000618534 Q8N9G6 341 aaPredicted RBP19.62■□□□□ 0.73
NEK3-208ENST00000618534 VPS37AQ8NEZ2 397 aa19.62■□□□□ 0.73
NEK3-208ENST00000618534 MED8Q96G25 268 aa19.62■□□□□ 0.73
NEK3-208ENST00000618534 MRPL9Q9BYD2 267 aaKnown RBP19.62■□□□□ 0.73
NEK3-208ENST00000618534 SGK2Q9HBY8 427 aa19.62■□□□□ 0.73
NEK3-208ENST00000618534 GPATCH2Q9NW75 528 aa19.62■□□□□ 0.73
NEK3-208ENST00000618534 SH3BP4Q9P0V3 963 aa19.62■□□□□ 0.73
NEK3-208ENST00000618534 ANXA8P13928 327 aa19.61■□□□□ 0.73
NEK3-208ENST00000618534 IRF3Q14653 427 aa19.61■□□□□ 0.73
NEK3-208ENST00000618534 IFI44LQ53G44 452 aa19.61■□□□□ 0.73
NEK3-208ENST00000618534 CCBE1Q6UXH8 406 aaPredicted RBP19.61■□□□□ 0.73
NEK3-208ENST00000618534 GDPD3Q7L5L3 318 aa19.61■□□□□ 0.73
NEK3-208ENST00000618534 FOXJ1Q92949 421 aa19.61■□□□□ 0.73
NEK3-208ENST00000618534 ECHDC3Q96DC8 303 aa19.61■□□□□ 0.73
NEK3-208ENST00000618534 ROGDIQ9GZN7 287 aa19.61■□□□□ 0.73
NEK3-208ENST00000618534 EHD1Q9H4M9 534 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms