RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 CDH7Q9ULB5 785 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 EXO1Q9UQ84 846 aaKnown RBP11.92□□□□□ -0.5
CIITA-212ENST00000618207 CKAP5Q14008 2032 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 SCN2AQ99250 2005 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 SLC31A1O15431 190 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 C6orf47O95873 294 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 FUCA1P04066 466 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 ACPPP15309 386 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 SOAT1P35610 550 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 ALDH9A1P49189 494 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 HBA1P69905 142 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 DPTQ07507 201 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 MTAPQ13126 283 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 MAP7Q14244 749 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 VMACQ2NL98 169 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 AGBL4Q5VU57 503 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 NXPE4Q6UWF7 544 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 ABRAXAS1Q6UWZ7 409 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 LRRTM4Q86VH4 590 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 NAGSQ8N159 534 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 JPH3Q8WXH2 748 aaPredicted RBP11.92□□□□□ -0.5
CIITA-212ENST00000618207 RAD51AP1Q96B01 352 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 PHF12Q96QT6 1004 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 SLC28A3Q9HAS3 691 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 DMRT3Q9NQL9 472 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 WDR37Q9Y2I8 494 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 APODP05090 189 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 HOXB9P17482 250 aaPredicted RBP11.92□□□□□ -0.5
CIITA-212ENST00000618207 PIGFQ07326 219 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 DLX2Q07687 328 aaPredicted RBP11.92□□□□□ -0.5
CIITA-212ENST00000618207 TMEM52BQ4KMG9 183 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 TMEM31Q5JXX7 168 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 COX20Q5RI15 118 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 TMIGD1Q6UXZ0 262 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 PATL1Q86TB9 770 aaKnown RBP11.92□□□□□ -0.5
CIITA-212ENST00000618207 VPS37AQ8NEZ2 397 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 OR8J2Q8NGG1 315 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 C11orf24Q96F05 449 aaPredicted RBP11.92□□□□□ -0.5
CIITA-212ENST00000618207 ZNF514Q96K75 400 aaPredicted RBP11.92□□□□□ -0.5
CIITA-212ENST00000618207 MACROD1Q9BQ69 325 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 EPHX3Q9H6B9 360 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 BRF2Q9HAW0 419 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 SNX8Q9Y5X2 465 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 MYO15AQ9UKN7 3530 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 OR52A4PA6NMU1 304 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 ETFAP13804 333 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 HPCAL1P37235 193 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 DCTP40126 519 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 GALK1P51570 392 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 VLDLRP98155 873 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 KCNAB2Q13303 367 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 FGL2Q14314 439 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 DPY19L1Q2PZI1 675 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 SPIN4Q56A73 249 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 PAGE2BQ5JRK9 111 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 FAM46CQ5VWP2 391 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 PTOV1Q86YD1 416 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 ZZZ3Q8IYH5 903 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 EID3Q8N140 333 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 SLC35B4Q969S0 331 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 C12orf66Q96MD2 445 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 ABCG4Q9H172 646 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 ITM2CQ9NQX7 267 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 FAM120CQ9NX05 1096 aaKnown RBP11.91□□□□□ -0.5
CIITA-212ENST00000618207 FBXL12Q9NXK8 326 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 MAP4K5Q9Y4K4 846 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 VEGFDO43915 354 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 RETP07949 1114 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 KDELR2P33947 212 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 GSSP48637 474 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 VASPP50552 380 aaPredicted RBP11.91□□□□□ -0.5
CIITA-212ENST00000618207 ZNF763Q0D2J5 394 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 IRF4Q15306 451 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 ADRM1Q16186 407 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 MEP1AQ16819 746 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 CEP68Q76N32 757 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 SLC44A2Q8IWA5 706 aaPredicted RBP11.91□□□□□ -0.5
CIITA-212ENST00000618207 ADHFE1Q8IWW8 467 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 MAGEB10Q96LZ2 347 aaPredicted RBP11.91□□□□□ -0.5
CIITA-212ENST00000618207 F2RL3Q96RI0 385 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 FERD3LQ96RJ6 166 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 EFCAB11Q9BUY7 163 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 SGPP1Q9BX95 441 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 AMBRA1Q9C0C7 1298 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 WDR26Q9H7D7 661 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 FAF1Q9UNN5 650 aaPredicted RBP11.91□□□□□ -0.5
CIITA-212ENST00000618207 GPR34Q9UPC5 381 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 PCDHB11Q9Y5F2 797 aa11.91□□□□□ -0.5
CIITA-212ENST00000618207 VCANP13611 3396 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 PPM1DO15297 605 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 PI15O43692 258 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 CCNDBP1O95273 360 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 IL3P08700 152 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 SLC35G4P0C7Q5 338 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 ADARB1P78563 741 aaKnown RBP11.9□□□□□ -0.5
CIITA-212ENST00000618207 FCHO2Q0JRZ9 810 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 SIM2Q14190 667 aaPredicted RBP11.9□□□□□ -0.5
CIITA-212ENST00000618207 PRSS53Q2L4Q9 553 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 ZNF765Q7L2R6 523 aa11.9□□□□□ -0.5
CIITA-212ENST00000618207 LPCAT2Q7L5N7 544 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms