RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 FEZF1A0PJY2 475 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 ACOT7O00154 380 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 FOXS1O43638 330 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 BUD23O43709 281 aaKnown RBP6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 EPPINO95925 133 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 HLA-DQB2P05538 268 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 SOD3P08294 240 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 ROS1P08922 2347 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 KRT3P12035 628 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 MSH3P20585 1137 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 CTSSP25774 331 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 ZFP36P26651 326 aaKnown RBP6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 HTR7P34969 479 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 TIMP3P35625 211 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 CPOXP36551 454 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 CDH6P55285 790 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 SLC26A5P58743 744 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 OGDHQ02218 1023 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 FAM27E3Q08E93 113 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 USP10Q14694 798 aaKnown RBP6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 PPP2R5EQ16537 467 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 LONRF2Q1L5Z9 754 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 MUM1Q2TAK8 710 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 HKDC1Q2TB90 917 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 ZNF658BQ4V348 819 aaPredicted RBP6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 ZC3H12BQ5HYM0 836 aaKnown RBP6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 EXOSC6Q5RKV6 272 aaKnown RBP6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 LDLRAP1Q5SW96 308 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 GARNL3Q5VVW2 1013 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 KRBA2Q6ZNG9 492 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 LCNL1Q6ZST4 164 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 MICALCLQ6ZW33 695 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 SLC22A16Q86VW1 577 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 FAM109AQ8N4B1 249 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 ZNF441Q8N8Z8 693 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 ENOX1Q8TC92 643 aaKnown RBP6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 HM13Q8TCT9 377 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 TFGQ92734 400 aaPredicted RBP6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 TRIB3Q96RU7 358 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 TSG101Q99816 390 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 SNRNP25Q9BV90 132 aaKnown RBP6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 EXO5Q9H790 373 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 MANSC1Q9H8J5 431 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 COG4Q9H9E3 785 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 SEMA4BQ9NPR2 832 aaPredicted RBP6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 RAD18Q9NS91 495 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 SOX13Q9UN79 622 aa6.31□□□□□ -1.4
SCAMP1-206ENST00000618166 HERC2O95714 4834 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 HEATR5AQ86XA9 2040 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 TRGV5A0A0B4J1U4 118 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 A0A1B0GVL5 298 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 SOWAHDA6NJG2 315 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 IFRD1O00458 451 aaPredicted RBP6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 SSX4O60224 188 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 PRPSAP2O60256 369 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 SUSD5O60279 629 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 TUBB4AP04350 444 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 FUT4P22083 530 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 MMP8P22894 467 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 CCKARP32238 428 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 CCNFP41002 786 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 RPL7AP62424 266 aaKnown RBP6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 LOXL1Q08397 574 aaPredicted RBP6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 PTP4A2Q12974 167 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 BECN1Q14457 450 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 KIR2DS3Q14952 304 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 NOMO1Q15155 1222 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 PRTGQ2VWP7 1150 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 BCL7AQ4VC05 210 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 FAM166AQ6J272 317 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 ZNF704Q6ZNC4 412 aaPredicted RBP6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 CYP4V2Q6ZWL3 525 aaPredicted RBP6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 LACC1Q8IV20 430 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 TRIM59Q8IWR1 403 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 FBXW8Q8N3Y1 598 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 BANPQ8N9N5 519 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 C9orf106Q8NAJ2 232 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 PSD4Q8NDX1 1056 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 NSMCE1Q8WV22 266 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 TSLPQ969D9 159 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 ANKRD9Q96BM1 317 aaPredicted RBP6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 LINC00615Q96LM1 132 aaPredicted RBP6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 IL17FQ96PD4 163 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 MED18Q9BUE0 208 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 ZNF747Q9BV97 191 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 RBCK1Q9BYM8 510 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 VPS16Q9H269 839 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 SLC6A15Q9H2J7 730 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 MBNL3Q9NUK0 354 aaKnown RBP6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 RBM22Q9NW64 420 aaKnown RBP eCLIP6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 OR6C2Q9NZP2 312 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 PCSK1NQ9UHG2 260 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 INTUQ9ULD6 942 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 RUVBL1Q9Y265 456 aaKnown RBP6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 PCDHA3Q9Y5H8 950 aa6.3□□□□□ -1.4
SCAMP1-206ENST00000618166 MALRD1Q5VYJ5 2156 aa6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 A0A0U1RQJ8 604 aa6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 HS3ST1O14792 307 aa6.29□□□□□ -1.4
SCAMP1-206ENST00000618166 OR10H2O60403 315 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms