RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 ISLR2Q6UXK2 745 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 RD3Q7Z3Z2 195 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 SLC9B2Q86UD5 537 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 CLEC4FQ8N1N0 589 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 OR4K1Q8NGD4 311 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 OR52E1Q8NGJ3 308 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 NETO1Q8TDF5 533 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 HMGB4Q8WW32 186 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 BMFQ96LC9 184 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 BTNL2Q9UIR0 455 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 MMP17Q9ULZ9 603 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 ACOX3O15254 700 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 KIF1CO43896 1103 aaKnown RBP16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 CXCR2P25025 360 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 C2orf80Q0P641 193 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 NFATC4Q14934 902 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 ANXA8L1Q5VT79 327 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 TRIM69Q86WT6 500 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 PLD3Q8IV08 490 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 FAM20CQ8IXL6 584 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 FAM3CQ92520 227 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 VPS50Q96JG6 964 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 F2RL3Q96RI0 385 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 C9orf16Q9BUW7 83 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 MYNNQ9NPC7 610 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 UTS2RQ9UKP6 389 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 NDRG2Q9UN36 371 aaKnown RBP16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 ICKQ9UPZ9 632 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 RTCAO00442 366 aaKnown RBP16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 PRKD3O94806 890 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 FURINP09958 794 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 C7P10643 843 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 AK4P27144 223 aaPredicted RBP16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 OR52E8Q6IFG1 317 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 FAM71E1Q6IPT2 247 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 ZCCHC8Q6NZY4 707 aaKnown RBP16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 GPR155Q7Z3F1 870 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 ADCK2Q7Z695 626 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 DENND6BQ8NEG7 585 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 VPS37AQ8NEZ2 397 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 OR2A1Q8NGT9 310 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 OR2L8Q8NGY9 312 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 JPH3Q8WXH2 748 aaPredicted RBP16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 TSACCQ96A04 125 aaPredicted RBP16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 CXorf40BQ96DE9 158 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 OSBPL11Q9BXB4 747 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 MS4A8Q9BY19 250 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 UGT2B28Q9BY64 529 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 MVB12BQ9H7P6 319 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 DCAF13Q9NV06 445 aaKnown RBP16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 TBC1D29Q9UFV1 150 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 PCDHB11Q9Y5F2 797 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 IGKV1-8A0A0C4DH67 115 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 RNF103-CHMP3A0A140T963 221 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 PLPP1O14494 284 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 CLOCKO15516 846 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 EML2O95834 649 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 SERPINA1P01009 418 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 RETP07949 1114 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 ABCB1P08183 1280 aaPredicted RBP16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 HOXC4P09017 264 aaPredicted RBP16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 POU3F3P20264 500 aaPredicted RBP16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 HNRNPA2B1P22626 353 aaKnown RBP16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 CSNK1G2P78368 415 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 CTBSQ01459 385 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 SFSWAPQ12872 951 aaKnown RBP16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 GAB1Q13480 694 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 FBXO43Q4G163 708 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 TMTC4Q5T4D3 741 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 KHDRBS2Q5VWX1 349 aaKnown RBP16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 SPRED1Q7Z699 444 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 SERPINA11Q86U17 422 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 MMP21Q8N119 569 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 PACRGLQ8N7B6 248 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 OR52E4Q8NGH9 312 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 OR4A15Q8NGL6 344 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 CIDECQ96AQ7 238 aaPredicted RBP16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 SLC47A1Q96FL8 570 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 DPH2Q9BQC3 489 aaPredicted RBP16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 BHLHE41Q9C0J9 482 aaPredicted RBP16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 TPT1P8Q9HAU6 139 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 SPASTQ9UBP0 616 aa16.61■□□□□ 0.25
PCDHGC3-205ENST00000617641 RNASET2O00584 256 aaKnown RBP16.6■□□□□ 0.25
PCDHGC3-205ENST00000617641 MBTPS2O43462 519 aa16.6■□□□□ 0.25
PCDHGC3-205ENST00000617641 OR1F1O43749 312 aa16.6■□□□□ 0.25
PCDHGC3-205ENST00000617641 IL3P08700 152 aa16.6■□□□□ 0.25
PCDHGC3-205ENST00000617641 GPX2P18283 190 aa16.6■□□□□ 0.25
PCDHGC3-205ENST00000617641 TPP2P29144 1249 aaPredicted RBP16.6■□□□□ 0.25
PCDHGC3-205ENST00000617641 PRDX1Q06830 199 aaKnown RBP16.6■□□□□ 0.25
PCDHGC3-205ENST00000617641 PDE7AQ13946 482 aa16.6■□□□□ 0.25
PCDHGC3-205ENST00000617641 DEPDC1Q5TB30 811 aa16.6■□□□□ 0.25
PCDHGC3-205ENST00000617641 Q6ZS52 159 aa16.6■□□□□ 0.25
PCDHGC3-205ENST00000617641 PPCDCQ96CD2 204 aa16.6■□□□□ 0.25
PCDHGC3-205ENST00000617641 WDR92Q96MX6 357 aa16.6■□□□□ 0.25
PCDHGC3-205ENST00000617641 PHF12Q96QT6 1004 aa16.6■□□□□ 0.25
PCDHGC3-205ENST00000617641 RAB11FIP5Q9BXF6 653 aa16.6■□□□□ 0.25
PCDHGC3-205ENST00000617641 NTN4Q9HB63 628 aa16.6■□□□□ 0.25
PCDHGC3-205ENST00000617641 EBF1Q9UH73 591 aa16.6■□□□□ 0.25
PCDHGC3-205ENST00000617641 PNMA8BQ9ULN7 279 aaPredicted RBP16.6■□□□□ 0.25
PCDHGC3-205ENST00000617641 HEATR5BQ9P2D3 2071 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms