RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 OCA2Q04671 838 aa15.86■□□□□ 0.13
CBWD3-211ENST00000615061 HYAL2Q12891 473 aa15.86■□□□□ 0.13
CBWD3-211ENST00000615061 KLC3Q6P597 504 aa15.86■□□□□ 0.13
CBWD3-211ENST00000615061 AICDAQ9GZX7 198 aa15.86■□□□□ 0.13
CBWD3-211ENST00000615061 P4HTMQ9NXG6 502 aa15.86■□□□□ 0.13
CBWD3-211ENST00000615061 GPRC5BQ9NZH0 403 aa15.86■□□□□ 0.13
CBWD3-211ENST00000615061 HCN3Q9P1Z3 774 aa15.86■□□□□ 0.13
CBWD3-211ENST00000615061 CPSF2Q9P2I0 782 aaKnown RBP15.86■□□□□ 0.13
CBWD3-211ENST00000615061 XPR1Q9UBH6 696 aa15.86■□□□□ 0.13
CBWD3-211ENST00000615061 TBK1Q9UHD2 729 aa15.86■□□□□ 0.13
CBWD3-211ENST00000615061 MAP4K5Q9Y4K4 846 aa15.86■□□□□ 0.13
CBWD3-211ENST00000615061 FOXO6A8MYZ6 492 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 C4orf51C9J302 202 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 DNAJB6O75190 326 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 ALOX12BO75342 701 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 RDH16O75452 317 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 JRKO75564 520 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 AVPR1BP47901 424 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 CCL11P51671 97 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 NFATC3Q12968 1075 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 PWP1Q13610 501 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 DOC2AQ14183 400 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 XKR6Q5GH73 641 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 TMIGD1Q6UXZ0 262 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 LRRC70Q7Z2Q7 622 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 TBC1D19Q8N5T2 526 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 CREB3L4Q8TEY5 395 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 UBTD2Q8WUN7 234 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 CRB3Q9BUF7 120 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 SLC25A18Q9H1K4 315 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 ADNPQ9H2P0 1102 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 KLHL31Q9H511 634 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 ACSS2Q9NR19 701 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 NAALAD2Q9Y3Q0 740 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 HS3ST3B1Q9Y662 390 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 K7EPI3 171 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 CLGNO14967 610 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 SIX3O95343 332 aaPredicted RBP15.85■□□□□ 0.13
CBWD3-211ENST00000615061 MMP11P24347 488 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 CHIT1Q13231 466 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 SETDB1Q15047 1291 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 DEFB134Q4QY38 66 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 ZC3H7AQ8IWR0 971 aaKnown RBP15.85■□□□□ 0.13
CBWD3-211ENST00000615061 OR5T3Q8NGG3 340 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 NT5CQ8TCD5 201 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 SCYL1Q96KG9 808 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 CAPS2Q9BXY5 557 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 ANKHQ9HCJ1 492 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 OPTCQ9UBM4 332 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 C3orf18Q9UK00 162 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 NXT1Q9UKK6 140 aaKnown RBP15.85■□□□□ 0.13
CBWD3-211ENST00000615061 ZNF490Q9ULM2 529 aaPredicted RBP15.85■□□□□ 0.13
CBWD3-211ENST00000615061 SLC22A7Q9Y694 548 aa15.85■□□□□ 0.13
CBWD3-211ENST00000615061 OR2W5A6NFC9 320 aa15.84■□□□□ 0.13
CBWD3-211ENST00000615061 A6NL46 340 aa15.84■□□□□ 0.13
CBWD3-211ENST00000615061 H0YIG0 161 aa15.84■□□□□ 0.13
CBWD3-211ENST00000615061 GOLGA8RI6L899 631 aa15.84■□□□□ 0.13
CBWD3-211ENST00000615061 SOCS6O14544 535 aa15.84■□□□□ 0.13
CBWD3-211ENST00000615061 KLK8O60259 260 aa15.84■□□□□ 0.13
CBWD3-211ENST00000615061 H2AFYO75367 372 aaKnown RBP15.84■□□□□ 0.13
CBWD3-211ENST00000615061 KLHL18O94889 574 aa15.84■□□□□ 0.13
CBWD3-211ENST00000615061 PDGFAP04085 211 aa15.84■□□□□ 0.13
CBWD3-211ENST00000615061 ZNF888P0CJ79 500 aaPredicted RBP15.84■□□□□ 0.13
CBWD3-211ENST00000615061 SLCO1A2P46721 670 aa15.84■□□□□ 0.13
CBWD3-211ENST00000615061 RAB8AP61006 207 aa15.84■□□□□ 0.13
CBWD3-211ENST00000615061 OLR1P78380 273 aa15.84■□□□□ 0.13
CBWD3-211ENST00000615061 RGS1Q08116 209 aa15.84■□□□□ 0.13
CBWD3-211ENST00000615061 RAPSNQ13702 412 aa15.84■□□□□ 0.13
CBWD3-211ENST00000615061 KIRREL2Q6UWL6 708 aa15.84■□□□□ 0.13
CBWD3-211ENST00000615061 VN1R5Q7Z5H4 357 aa15.84■□□□□ 0.13
CBWD3-211ENST00000615061 AFAP1L2Q8N4X5 818 aa15.84■□□□□ 0.13
CBWD3-211ENST00000615061 TEX9Q8N6V9 391 aa15.84■□□□□ 0.13
CBWD3-211ENST00000615061 C9orf43Q8TAL5 461 aaPredicted RBP15.84■□□□□ 0.13
CBWD3-211ENST00000615061 MZB1Q8WU39 189 aa15.84■□□□□ 0.13
CBWD3-211ENST00000615061 C8orf44Q96CB5 159 aa15.84■□□□□ 0.13
CBWD3-211ENST00000615061 SLC6A16Q9GZN6 736 aa15.84■□□□□ 0.13
CBWD3-211ENST00000615061 MKKSQ9NPJ1 570 aaPredicted RBP15.84■□□□□ 0.13
CBWD3-211ENST00000615061 PSMC3IPQ9P2W1 217 aaPredicted RBP15.84■□□□□ 0.13
CBWD3-211ENST00000615061 TUBD1Q9UJT1 453 aa15.84■□□□□ 0.13
CBWD3-211ENST00000615061 TP53TG5Q9Y2B4 290 aa15.84■□□□□ 0.13
CBWD3-211ENST00000615061 IDSB3KWA1 339 aa15.83■□□□□ 0.12
CBWD3-211ENST00000615061 PRPF4O43172 522 aaKnown RBP eCLIP15.83■□□□□ 0.12
CBWD3-211ENST00000615061 WFS1O76024 890 aa15.83■□□□□ 0.12
CBWD3-211ENST00000615061 TBX6O95947 436 aaPredicted RBP15.83■□□□□ 0.12
CBWD3-211ENST00000615061 SBK3P0C264 359 aa15.83■□□□□ 0.12
CBWD3-211ENST00000615061 ALOX12P18054 663 aa15.83■□□□□ 0.12
CBWD3-211ENST00000615061 CXCR2P25025 360 aa15.83■□□□□ 0.12
CBWD3-211ENST00000615061 ALDH18A1P54886 795 aaKnown RBP15.83■□□□□ 0.12
CBWD3-211ENST00000615061 IRF8Q02556 426 aa15.83■□□□□ 0.12
CBWD3-211ENST00000615061 RBBP7Q16576 425 aa15.83■□□□□ 0.12
CBWD3-211ENST00000615061 DCAF10Q5QP82 559 aa15.83■□□□□ 0.12
CBWD3-211ENST00000615061 LGSNQ5TDP6 509 aa15.83■□□□□ 0.12
CBWD3-211ENST00000615061 FAAH2Q6GMR7 532 aa15.83■□□□□ 0.12
CBWD3-211ENST00000615061 TIFABQ6ZNK6 161 aa15.83■□□□□ 0.12
CBWD3-211ENST00000615061 KRT78Q8N1N4 520 aa15.83■□□□□ 0.12
CBWD3-211ENST00000615061 AMER2Q8N7J2 671 aa15.83■□□□□ 0.12
CBWD3-211ENST00000615061 PTGR2Q8N8N7 351 aaPredicted RBP15.83■□□□□ 0.12
CBWD3-211ENST00000615061 TMEM102Q8N9M5 508 aaPredicted RBP15.83■□□□□ 0.12
CBWD3-211ENST00000615061 TRPV3Q8NET8 790 aa15.83■□□□□ 0.12
CBWD3-211ENST00000615061 OR51Q1Q8NH59 317 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms