RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 ANAPC2Q9UJX6 822 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 ACSL5Q9ULC5 683 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 OAZ3Q9UMX2 235 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 ICKQ9UPZ9 632 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 EXO1Q9UQ84 846 aaKnown RBP3.29□□□□□ -1.88
LIG4-205ENST00000614526 LRCH1Q9Y2L9 728 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 MAP4K5Q9Y4K4 846 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 CKAP5Q14008 2032 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 CFAP54Q96N23 3096 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 A0A1B0GTW7 788 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 EVPLLA8MZ36 301 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 CXCR6O00574 342 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 GNGT2O14610 69 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 SH3BP5O60239 455 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 UGDHO60701 494 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 ERAL1O75616 437 aaKnown RBP3.29□□□□□ -1.88
LIG4-205ENST00000614526 TBX6O95947 436 aaPredicted RBP3.29□□□□□ -1.88
LIG4-205ENST00000614526 SERPINA1P01009 418 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 RPN2P04844 631 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 C8BP07358 591 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 ACPPP15309 386 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 PRKACGP22612 351 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 FASP25445 335 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 GCKP35557 465 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 MAPK9P45984 424 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 RAB28P51157 221 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 CCR8P51685 355 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 EEFSECP57772 596 aaKnown RBP3.29□□□□□ -1.88
LIG4-205ENST00000614526 SRP54P61011 504 aaKnown RBP3.29□□□□□ -1.88
LIG4-205ENST00000614526 HBA1P69905 142 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 IL1RL1Q01638 556 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 KLC1Q07866 573 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 BNIP2Q12982 314 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 RPA4Q13156 261 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 GAB1Q13480 694 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 ZNF750Q32MQ0 723 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 PRRT3Q5FWE3 981 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 COX20Q5RI15 118 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 OGFRL1Q5TC84 451 aaPredicted RBP3.29□□□□□ -1.88
LIG4-205ENST00000614526 KIAA1614Q5VZ46 1190 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 TBPL2Q6SJ96 375 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 OLIG3Q7RTU3 272 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 ZNF438Q7Z4V0 828 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 TAF8Q7Z7C8 310 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 VTCN1Q7Z7D3 282 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 TRIM48Q8IWZ4 208 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 KRT78Q8N1N4 520 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 OXR1Q8N573 874 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 TSTD1Q8NFU3 115 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 MAGEE2Q8TD90 523 aaPredicted RBP3.29□□□□□ -1.88
LIG4-205ENST00000614526 C16orf78Q8WTQ4 265 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 TPD52L3Q96J77 140 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 CDX2Q99626 313 aaPredicted RBP3.29□□□□□ -1.88
LIG4-205ENST00000614526 AIF1LQ9BQI0 150 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 MENTQ9BUN1 341 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 ANKRA2Q9H9E1 313 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 PREBQ9HCU5 417 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 MRPS30Q9NP92 439 aaKnown RBP3.29□□□□□ -1.88
LIG4-205ENST00000614526 LTB4R2Q9NPC1 389 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 MIEF1Q9NQG6 463 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 CCM2LQ9NUG4 571 aaPredicted RBP3.29□□□□□ -1.88
LIG4-205ENST00000614526 TEX10Q9NXF1 929 aaPredicted RBP3.29□□□□□ -1.88
LIG4-205ENST00000614526 FBXW2Q9UKT8 454 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 AP4B1Q9Y6B7 739 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 SCN2AQ99250 2005 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 MUC22E2RYF6 1773 aaPredicted RBP3.29□□□□□ -1.88
LIG4-205ENST00000614526 A0A0J9YVX5 310 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 A0A1W2PS29 197 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 KRBA1A5PL33 1030 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 hCG_2039718K7EN88 272 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 PLOD2O00469 737 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 HAT1O14929 419 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 SCAMP2O15127 329 aaKnown RBP3.29□□□□□ -1.88
LIG4-205ENST00000614526 NDUFS4O43181 175 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 TMPRSS11DO60235 418 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 NOBOXO60393 691 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 SCN2BO60939 215 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 SDC3O75056 442 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 SMNDC1O75940 238 aaKnown RBP eCLIP3.29□□□□□ -1.88
LIG4-205ENST00000614526 KLHL18O94889 574 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 EPN2O95208 641 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 FKBP9O95302 570 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 IGHV4-34P06331 123 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 DCNP07585 359 aaKnown RBP3.29□□□□□ -1.88
LIG4-205ENST00000614526 ANXA6P08133 673 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 THEGLP0DJG4 465 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 CHRNB1P11230 501 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 ETFAP13804 333 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 CTSEP14091 401 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 UQCRBP14927 111 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 FOSL2P15408 326 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 TNFRSF1BP20333 461 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 MAGP20916 626 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 HTR1EP28566 365 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 TPP2P29144 1249 aaPredicted RBP3.29□□□□□ -1.88
LIG4-205ENST00000614526 PEBP1P30086 187 aaKnown RBP3.29□□□□□ -1.88
LIG4-205ENST00000614526 YAP1P46937 504 aaKnown RBP3.29□□□□□ -1.88
LIG4-205ENST00000614526 MAPK12P53778 367 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 PRKAG1P54619 331 aa3.29□□□□□ -1.88
LIG4-205ENST00000614526 PPP1CAP62136 330 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms