RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 PLEKHM1Q9Y4G2 1056 aa2.94□□□□□ -1.94
CBWD3-209ENST00000614377 PCDHA11Q9Y5I1 949 aa2.94□□□□□ -1.94
CBWD3-209ENST00000614377 KIAA0586Q9BVV6 1533 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 LRP5O75197 1615 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 PTPN23Q9H3S7 1636 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 A0A087WZY1 265 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 C2orf71A6NGG8 1288 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 OOEPA6NGQ2 149 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 DRGXA6NNA5 263 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 H7C1Q1 480 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 EEF2KO00418 725 aaKnown RBP2.93□□□□□ -1.94
CBWD3-209ENST00000614377 ZBTB5O15062 677 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 SMAD9O15198 467 aaKnown RBP2.93□□□□□ -1.94
CBWD3-209ENST00000614377 TGFB1I1O43294 461 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 USP12O75317 370 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 PDE9AO76083 593 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 VAMP5O95183 116 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 WISP1O95388 367 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 BMP15O95972 392 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 F10P00742 488 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 PCCAP05165 728 aaPredicted RBP2.93□□□□□ -1.94
CBWD3-209ENST00000614377 SBK2P0C263 348 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 UQCRFS1P1P0C7P4 283 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 PNLIPP16233 465 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 PTNP21246 168 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 CCNOP22674 350 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 DDX6P26196 483 aaKnown RBP eCLIP2.93□□□□□ -1.94
CBWD3-209ENST00000614377 IL1R2P27930 398 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 GRNP28799 593 aaKnown RBP2.93□□□□□ -1.94
CBWD3-209ENST00000614377 ICAM3P32942 547 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 SOAT1P35610 550 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 GJC1P36383 396 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 SREBF1P36956 1147 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 FASLGP48023 281 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 GPR143P51810 404 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 EMP2P54851 167 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 ITGA1P56199 1179 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 PSME3P61289 254 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 SMAD3P84022 425 aaKnown RBP2.93□□□□□ -1.94
CBWD3-209ENST00000614377 ZNF45Q02386 682 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 ZNF844Q08AG5 666 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 PDZK1IP1Q13113 114 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 SEMA3BQ13214 749 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 GPR19Q15760 415 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 RAB30Q15771 203 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 ZYXQ15942 572 aaKnown RBP2.93□□□□□ -1.94
CBWD3-209ENST00000614377 CCDC6Q16204 474 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 HIF1AQ16665 826 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 MICBQ29980 383 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 HYAL4Q2M3T9 481 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 PRICKLE4Q2TBC4 344 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 BTBD16Q32M84 506 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 FAM214AQ32MH5 1076 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 ZNF667Q5HYK9 610 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 DNLZQ5SXM8 178 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 ARL6IP4Q66PJ3 421 aaKnown RBP2.93□□□□□ -1.94
CBWD3-209ENST00000614377 ANKS6Q68DC2 871 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 RPL13AP3Q6NVV1 102 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 NDUFAF7Q7L592 441 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 NLRX1Q86UT6 975 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 ZNF573Q86YE8 665 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 FAM185AQ8N0U4 392 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 ZNF786Q8N393 782 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 SVOPLQ8N434 492 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 WDTC1Q8N5D0 677 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 KYQ8NBH2 561 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 SLC44A5Q8NCS7 719 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 BPIFCQ8NFQ6 507 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 OR5D18Q8NGL1 313 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 OR9A2Q8NGT5 310 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 PCDH19Q8TAB3 1148 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 C9orf43Q8TAL5 461 aaPredicted RBP2.93□□□□□ -1.94
CBWD3-209ENST00000614377 ZFAND1Q8TCF1 268 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 C22orf15Q8WYQ4 148 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 SNAPC3Q92966 411 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 FOXRED1Q96CU9 486 aaPredicted RBP2.93□□□□□ -1.94
CBWD3-209ENST00000614377 LINGO1Q96FE5 620 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 ST6GAL2Q96JF0 529 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 PPP3R2Q96LZ3 170 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 C12orf66Q96MD2 445 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 TEFMQ96QE5 360 aaKnown RBP2.93□□□□□ -1.94
CBWD3-209ENST00000614377 ABHD1Q96SE0 405 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 PRRT1Q99946 306 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 ZNF559Q9BR84 538 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 C11orf70Q9BRQ4 267 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 FUZQ9BT04 418 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 RPF2Q9H7B2 306 aaKnown RBP2.93□□□□□ -1.94
CBWD3-209ENST00000614377 ZFP14Q9HCL3 533 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 DNAJC17Q9NVM6 304 aaKnown RBP2.93□□□□□ -1.94
CBWD3-209ENST00000614377 BTG4Q9NY30 223 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 TMEM216Q9P0N5 145 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 WARS2Q9UGM6 360 aaKnown RBP2.93□□□□□ -1.94
CBWD3-209ENST00000614377 ARMCX3Q9UH62 379 aaPredicted RBP2.93□□□□□ -1.94
CBWD3-209ENST00000614377 ZNF221Q9UK13 617 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 ANGEL1Q9UNK9 670 aaKnown RBP2.93□□□□□ -1.94
CBWD3-209ENST00000614377 TNNQ9UQP3 1299 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 PLEKHA6Q9Y2H5 1048 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 STRAPQ9Y3F4 350 aaKnown RBP2.93□□□□□ -1.94
CBWD3-209ENST00000614377 V9GYQ6 96 aa2.93□□□□□ -1.94
CBWD3-209ENST00000614377 C9orf84Q5VXU9 1444 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms