RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 MXRA7P84157 204 aa13.16□□□□□ -0.3
TMEM254-213ENST00000613758 SLC14A1Q13336 389 aa13.16□□□□□ -0.3
TMEM254-213ENST00000613758 CUL3Q13618 768 aa13.16□□□□□ -0.3
TMEM254-213ENST00000613758 CYLC2Q14093 348 aaPredicted RBP13.16□□□□□ -0.3
TMEM254-213ENST00000613758 KIAA0040Q15053 153 aa13.16□□□□□ -0.3
TMEM254-213ENST00000613758 CSRP2Q16527 193 aa13.16□□□□□ -0.3
TMEM254-213ENST00000613758 DNAL1Q4LDG9 190 aa13.16□□□□□ -0.3
TMEM254-213ENST00000613758 FUNDC1Q8IVP5 155 aa13.16□□□□□ -0.3
TMEM254-213ENST00000613758 TRPV3Q8NET8 790 aa13.16□□□□□ -0.3
TMEM254-213ENST00000613758 RHBDD1Q8TEB9 315 aa13.16□□□□□ -0.3
TMEM254-213ENST00000613758 CREB3L4Q8TEY5 395 aa13.16□□□□□ -0.3
TMEM254-213ENST00000613758 APIPQ96GX9 242 aa13.16□□□□□ -0.3
TMEM254-213ENST00000613758 FCRL4Q96PJ5 515 aa13.16□□□□□ -0.3
TMEM254-213ENST00000613758 CD180Q99467 661 aa13.16□□□□□ -0.3
TMEM254-213ENST00000613758 CCDC3Q9BQI4 270 aa13.16□□□□□ -0.3
TMEM254-213ENST00000613758 EDEM2Q9BV94 578 aa13.16□□□□□ -0.3
TMEM254-213ENST00000613758 MMADHCQ9H3L0 296 aaPredicted RBP13.16□□□□□ -0.3
TMEM254-213ENST00000613758 KLHL3Q9UH77 587 aa13.16□□□□□ -0.3
TMEM254-213ENST00000613758 A0A0J9YVX5 310 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 TLCD2A6NGC4 264 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 PSMD12O00232 456 aaPredicted RBP13.15□□□□□ -0.3
TMEM254-213ENST00000613758 LDOC1O95751 146 aaPredicted RBP13.15□□□□□ -0.3
TMEM254-213ENST00000613758 TBX6O95947 436 aaPredicted RBP13.15□□□□□ -0.3
TMEM254-213ENST00000613758 DIO3P55073 304 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 TBL3Q12788 808 aaKnown RBP13.15□□□□□ -0.3
TMEM254-213ENST00000613758 MAD2L1Q13257 205 aaPredicted RBP13.15□□□□□ -0.3
TMEM254-213ENST00000613758 SQSTM1Q13501 440 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 RIPK1Q13546 671 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 DEPDC1Q5TB30 811 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 IL23RQ5VWK5 629 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 PAOXQ6QHF9 649 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 WDR74Q6RFH5 385 aaPredicted RBP13.15□□□□□ -0.3
TMEM254-213ENST00000613758 WDFY4Q6ZS81 3184 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 C19orf47Q8N9M1 422 aaKnown RBP13.15□□□□□ -0.3
TMEM254-213ENST00000613758 OR9I1Q8NGQ6 314 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 IFI44Q8TCB0 444 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 CHTF18Q8WVB6 975 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 THAP11Q96EK4 314 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 CNDP2Q96KP4 475 aaKnown RBP13.15□□□□□ -0.3
TMEM254-213ENST00000613758 OR2A5Q96R48 311 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 ZFYVE21Q9BQ24 234 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 MS4A8Q9BY19 250 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 MRPL1Q9BYD6 325 aaKnown RBP13.15□□□□□ -0.3
TMEM254-213ENST00000613758 RASSF4Q9H2L5 321 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 SYNPO2LQ9H987 977 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 TMEM9BQ9NQ34 198 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 MRGBPQ9NV56 204 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.15□□□□□ -0.3
TMEM254-213ENST00000613758 SAP18O00422 153 aaKnown RBP13.15□□□□□ -0.3
TMEM254-213ENST00000613758 CASC3O15234 703 aaKnown RBP13.15□□□□□ -0.3
TMEM254-213ENST00000613758 LRP3O75074 770 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 C9P02748 559 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 STATHP02808 62 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 CD59P13987 128 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 IDO1P14902 403 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 CSF2RBP32927 897 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 RAP1GDS1P52306 607 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 CCL7P80098 99 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 ACSM2AQ08AH3 577 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 RPS6KA2Q15349 733 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 GSTA3Q16772 222 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 AGKQ53H12 422 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 CACHD1Q5VU97 1274 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 KHDRBS2Q5VWX1 349 aaKnown RBP13.15□□□□□ -0.3
TMEM254-213ENST00000613758 ACSM2BQ68CK6 577 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 PARP9Q8IXQ6 854 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 PIAS4Q8N2W9 510 aaPredicted RBP13.15□□□□□ -0.3
TMEM254-213ENST00000613758 SLC13A3Q8WWT9 602 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 MCUR1Q96AQ8 359 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 RCN3Q96D15 328 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 TCTN2Q96GX1 697 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 METTL2AQ96IZ6 378 aaKnown RBP13.15□□□□□ -0.3
TMEM254-213ENST00000613758 CLPTM1LQ96KA5 538 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 F2RL3Q96RI0 385 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 MACROD1Q9BQ69 325 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 THTPAQ9BU02 230 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 FAM60AQ9NP50 221 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 PARD6AQ9NPB6 346 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 AIG1Q9NVV5 245 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 NOP53Q9NZM5 478 aaKnown RBP13.15□□□□□ -0.3
TMEM254-213ENST00000613758 EIF3LQ9Y262 564 aaKnown RBP13.15□□□□□ -0.3
TMEM254-213ENST00000613758 TMED5Q9Y3A6 229 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 GPR45Q9Y5Y3 372 aa13.15□□□□□ -0.3
TMEM254-213ENST00000613758 A0A088AWK7 358 aa13.14□□□□□ -0.31
TMEM254-213ENST00000613758 IGHV5-51A0A0C4DH38 117 aa13.14□□□□□ -0.31
TMEM254-213ENST00000613758 ATP6V1G2O95670 118 aa13.14□□□□□ -0.31
TMEM254-213ENST00000613758 RPLP0P05388 317 aaKnown RBP13.14□□□□□ -0.31
TMEM254-213ENST00000613758 CKMT2P17540 419 aa13.14□□□□□ -0.31
TMEM254-213ENST00000613758 MRPL19P49406 292 aaKnown RBP13.14□□□□□ -0.31
TMEM254-213ENST00000613758 STX1BP61266 288 aa13.14□□□□□ -0.31
TMEM254-213ENST00000613758 SPIN4Q56A73 249 aa13.14□□□□□ -0.31
TMEM254-213ENST00000613758 RNF44Q7L0R7 432 aa13.14□□□□□ -0.31
TMEM254-213ENST00000613758 VN1R4Q7Z5H5 301 aa13.14□□□□□ -0.31
TMEM254-213ENST00000613758 PACS2Q86VP3 889 aa13.14□□□□□ -0.31
TMEM254-213ENST00000613758 C1orf52Q8N6N3 182 aaKnown RBP13.14□□□□□ -0.31
TMEM254-213ENST00000613758 NUDT22Q9BRQ3 303 aa13.14□□□□□ -0.31
TMEM254-213ENST00000613758 KCNH6Q9H252 994 aa13.14□□□□□ -0.31
TMEM254-213ENST00000613758 LRRN3Q9H3W5 708 aa13.14□□□□□ -0.31
TMEM254-213ENST00000613758 DENND2DQ9H6A0 471 aaPredicted RBP13.14□□□□□ -0.31
TMEM254-213ENST00000613758 CCDC167Q9P0B6 97 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms