RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 FAM120CQ9NX05 1096 aaKnown RBP13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 THUMPD1Q9NXG2 353 aaKnown RBP13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 SAGE1Q9NXZ1 904 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 MAP4K5Q9Y4K4 846 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 J3KTA2 159 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 ANGPTL1O95841 491 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 PSMB5P28074 263 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 TGFBR1P36897 503 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 DGCR6Q14129 220 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 SKIV2LQ15477 1246 aaKnown RBP13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 IQCCQ4KMZ1 466 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 TTC23LQ6PF05 361 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 CBLL1Q75N03 491 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 TRIM73Q86UV7 250 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 GPR65Q8IYL9 337 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 SPPL2AQ8TCT8 520 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 LGR4Q9BXB1 951 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 CHST8Q9H2A9 424 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 RLIMQ9NVW2 624 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 MARK1Q9P0L2 795 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 CORINQ9Y5Q5 1042 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 KIAA1549LQ6ZVL6 1849 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 LINC01553A4QN01 128 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 PRAMEF25A6NGN4 478 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 NPIPB8E9PQR5 432 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 TOR1BO14657 336 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 EFCAB14O75071 495 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 VIPP01282 170 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 SEMG1P04279 462 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 CD6P30203 668 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 GJA8P48165 433 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 NUP107P57740 925 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 TAS2R50P59544 299 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 RPS26P62854 115 aaKnown RBP13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 KCNJ10P78508 379 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 TCEA2Q15560 299 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 RBM48Q5RL73 367 aaKnown RBP13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 GPR153Q6NV75 609 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 ALDH16A1Q8IZ83 802 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 SMYD1Q8NB12 490 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 SNRNP27Q8WVK2 155 aaKnown RBP13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 ATL1Q8WXF7 558 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 KCNC2Q96PR1 638 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 NODALQ96S42 347 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 GALNT8Q9NY28 637 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 SPASTQ9UBP0 616 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 PNMA8BQ9ULN7 279 aaPredicted RBP13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 ORC6Q9Y5N6 252 aa13.53□□□□□ -0.24
PCDHGA3-202ENST00000612467 UGDHO60701 494 aa13.52□□□□□ -0.24
PCDHGA3-202ENST00000612467 CCNA2P20248 432 aa13.52□□□□□ -0.24
PCDHGA3-202ENST00000612467 DDX6P26196 483 aaKnown RBP eCLIP13.52□□□□□ -0.24
PCDHGA3-202ENST00000612467 RRM2P31350 389 aa13.52□□□□□ -0.24
PCDHGA3-202ENST00000612467 PTGER1P34995 402 aa13.52□□□□□ -0.24
PCDHGA3-202ENST00000612467 SLC19A1P41440 591 aa13.52□□□□□ -0.24
PCDHGA3-202ENST00000612467 MVDP53602 400 aa13.52□□□□□ -0.24
PCDHGA3-202ENST00000612467 RAD23AP54725 363 aa13.52□□□□□ -0.24
PCDHGA3-202ENST00000612467 EMX1Q04741 257 aaPredicted RBP13.52□□□□□ -0.24
PCDHGA3-202ENST00000612467 FPGSQ05932 587 aa13.52□□□□□ -0.24
PCDHGA3-202ENST00000612467 C2orf80Q0P641 193 aa13.52□□□□□ -0.24
PCDHGA3-202ENST00000612467 KCNC3Q14003 757 aa13.52□□□□□ -0.24
PCDHGA3-202ENST00000612467 GAB4Q2WGN9 574 aa13.52□□□□□ -0.24
PCDHGA3-202ENST00000612467 CAPN13Q6MZZ7 669 aaPredicted RBP13.52□□□□□ -0.24
PCDHGA3-202ENST00000612467 NLRP8Q86W28 1048 aa13.52□□□□□ -0.24
PCDHGA3-202ENST00000612467 FAM20CQ8IXL6 584 aa13.52□□□□□ -0.24
PCDHGA3-202ENST00000612467 TTC29Q8NA56 475 aaPredicted RBP13.52□□□□□ -0.24
PCDHGA3-202ENST00000612467 UCN3Q969E3 161 aa13.52□□□□□ -0.24
PCDHGA3-202ENST00000612467 FAM129BQ96TA1 746 aa13.52□□□□□ -0.24
PCDHGA3-202ENST00000612467 YTHDF1Q9BYJ9 559 aaKnown RBP13.52□□□□□ -0.24
PCDHGA3-202ENST00000612467 KIF17Q9P2E2 1029 aa13.52□□□□□ -0.24
PCDHGA3-202ENST00000612467 BAG5Q9UL15 447 aa13.52□□□□□ -0.24
PCDHGA3-202ENST00000612467 ASF1AQ9Y294 204 aa13.52□□□□□ -0.24
PCDHGA3-202ENST00000612467 GMPPBQ9Y5P6 360 aa13.52□□□□□ -0.24
PCDHGA3-202ENST00000612467 TRPM6Q9BX84 2022 aa13.52□□□□□ -0.25
PCDHGA3-202ENST00000612467 A0A0G2JN53 185 aa13.52□□□□□ -0.25
PCDHGA3-202ENST00000612467 ADRB3P13945 408 aa13.52□□□□□ -0.25
PCDHGA3-202ENST00000612467 PCMT1P22061 227 aa13.52□□□□□ -0.25
PCDHGA3-202ENST00000612467 GSTM2P28161 218 aa13.52□□□□□ -0.25
PCDHGA3-202ENST00000612467 ZNF234Q14588 700 aa13.52□□□□□ -0.25
PCDHGA3-202ENST00000612467 FAM78AQ5JUQ0 283 aa13.52□□□□□ -0.25
PCDHGA3-202ENST00000612467 TMEM240Q5SV17 173 aa13.52□□□□□ -0.25
PCDHGA3-202ENST00000612467 KDM4DQ6B0I6 523 aa13.52□□□□□ -0.25
PCDHGA3-202ENST00000612467 SLC16A12Q6ZSM3 486 aa13.52□□□□□ -0.25
PCDHGA3-202ENST00000612467 EIF3MQ7L2H7 374 aaKnown RBP13.52□□□□□ -0.25
PCDHGA3-202ENST00000612467 PLD3Q8IV08 490 aa13.52□□□□□ -0.25
PCDHGA3-202ENST00000612467 DNAJB8Q8NHS0 232 aa13.52□□□□□ -0.25
PCDHGA3-202ENST00000612467 NFKBIDQ8NI38 313 aa13.52□□□□□ -0.25
PCDHGA3-202ENST00000612467 FAM81AQ8TBF8 368 aa13.52□□□□□ -0.25
PCDHGA3-202ENST00000612467 KLK6Q92876 244 aa13.52□□□□□ -0.25
PCDHGA3-202ENST00000612467 C7orf34Q96L11 122 aa13.52□□□□□ -0.25
PCDHGA3-202ENST00000612467 RAD9AQ99638 391 aa13.52□□□□□ -0.25
PCDHGA3-202ENST00000612467 ARMC7Q9H6L4 198 aa13.52□□□□□ -0.25
PCDHGA3-202ENST00000612467 RUBCNLQ9H714 662 aa13.52□□□□□ -0.25
PCDHGA3-202ENST00000612467 TM9SF3Q9HD45 589 aa13.52□□□□□ -0.25
PCDHGA3-202ENST00000612467 DMRT3Q9NQL9 472 aa13.52□□□□□ -0.25
PCDHGA3-202ENST00000612467 DKK3Q9UBP4 350 aa13.52□□□□□ -0.25
PCDHGA3-202ENST00000612467 CDH7Q9ULB5 785 aa13.52□□□□□ -0.25
PCDHGA3-202ENST00000612467 FEZF1A0PJY2 475 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 FADS2O95864 444 aaKnown RBP13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 SOAT1P35610 550 aa13.51□□□□□ -0.25
PCDHGA3-202ENST00000612467 MASP1P48740 699 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms