RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 WRAP53Q9BUR4 548 aaKnown RBP14.16□□□□□ -0.14
CDH1-213ENST00000612417 EBPLQ9BY08 206 aa14.16□□□□□ -0.14
CDH1-213ENST00000612417 ATG10Q9H0Y0 220 aa14.16□□□□□ -0.14
CDH1-213ENST00000612417 TMEM245Q9H330 911 aa14.16□□□□□ -0.14
CDH1-213ENST00000612417 DUSP21Q9H596 190 aa14.16□□□□□ -0.14
CDH1-213ENST00000612417 BRF2Q9HAW0 419 aa14.16□□□□□ -0.14
CDH1-213ENST00000612417 DYRK4Q9NR20 520 aa14.16□□□□□ -0.14
CDH1-213ENST00000612417 WARS2Q9UGM6 360 aaKnown RBP14.16□□□□□ -0.14
CDH1-213ENST00000612417 ITM2BQ9Y287 266 aa14.16□□□□□ -0.14
CDH1-213ENST00000612417 B3GNT3Q9Y2A9 372 aa14.16□□□□□ -0.14
CDH1-213ENST00000612417 COL4A3Q01955 1670 aa14.16□□□□□ -0.14
CDH1-213ENST00000612417 ZNF99A8MXY4 864 aaPredicted RBP14.16□□□□□ -0.14
CDH1-213ENST00000612417 H0YIV9 168 aa14.16□□□□□ -0.14
CDH1-213ENST00000612417 MITFO75030 526 aaPredicted RBP14.16□□□□□ -0.14
CDH1-213ENST00000612417 NDUFS2O75306 463 aa14.16□□□□□ -0.14
CDH1-213ENST00000612417 ATP6V1G1O75348 118 aa14.16□□□□□ -0.14
CDH1-213ENST00000612417 BCAS1O75363 584 aaPredicted RBP14.16□□□□□ -0.14
CDH1-213ENST00000612417 JRKO75564 520 aa14.16□□□□□ -0.14
CDH1-213ENST00000612417 IL12RB1P42701 662 aa14.16□□□□□ -0.14
CDH1-213ENST00000612417 SOX9P48436 509 aa14.16□□□□□ -0.14
CDH1-213ENST00000612417 SLC35A2P78381 396 aa14.16□□□□□ -0.14
CDH1-213ENST00000612417 IL5RAQ01344 420 aa14.16□□□□□ -0.14
CDH1-213ENST00000612417 EMX1Q04741 257 aaPredicted RBP14.16□□□□□ -0.14
CDH1-213ENST00000612417 PIGFQ07326 219 aa14.16□□□□□ -0.14
CDH1-213ENST00000612417 AQP6Q13520 282 aa14.16□□□□□ -0.14
CDH1-213ENST00000612417 CTF1Q16619 201 aa14.16□□□□□ -0.14
CDH1-213ENST00000612417 MTSS1LQ765P7 747 aa14.16□□□□□ -0.14
CDH1-213ENST00000612417 CAMKMTQ7Z624 323 aa14.16□□□□□ -0.14
CDH1-213ENST00000612417 CNIH3Q8TBE1 160 aa14.16□□□□□ -0.14
CDH1-213ENST00000612417 GIPC3Q8TF64 312 aa14.16□□□□□ -0.14
CDH1-213ENST00000612417 FAR1Q8WVX9 515 aa14.16□□□□□ -0.14
CDH1-213ENST00000612417 ELMO1Q92556 727 aa14.16□□□□□ -0.14
CDH1-213ENST00000612417 BARD1Q99728 777 aaKnown RBP14.16□□□□□ -0.14
CDH1-213ENST00000612417 DGCR6LQ9BY27 220 aa14.16□□□□□ -0.14
CDH1-213ENST00000612417 MAPRE3Q9UPY8 281 aa14.16□□□□□ -0.14
CDH1-213ENST00000612417 ERVK-11Q9UQG0 969 aa14.16□□□□□ -0.14
CDH1-213ENST00000612417 EYSQ5T1H1 3165 aa14.16□□□□□ -0.14
CDH1-213ENST00000612417 PCM1Q15154 2024 aa14.16□□□□□ -0.14
CDH1-213ENST00000612417 PTGES3LE9PB15 166 aa14.15□□□□□ -0.14
CDH1-213ENST00000612417 QSOX1O00391 747 aa14.15□□□□□ -0.14
CDH1-213ENST00000612417 PLK4O00444 970 aa14.15□□□□□ -0.14
CDH1-213ENST00000612417 MRPS14O60783 128 aaKnown RBP14.15□□□□□ -0.14
CDH1-213ENST00000612417 INMTO95050 263 aa14.15□□□□□ -0.14
CDH1-213ENST00000612417 GABARAPO95166 117 aa14.15□□□□□ -0.14
CDH1-213ENST00000612417 ZBTB11O95625 1053 aaPredicted RBP14.15□□□□□ -0.14
CDH1-213ENST00000612417 COX7A2P14406 83 aa14.15□□□□□ -0.14
CDH1-213ENST00000612417 ITGB7P26010 798 aa14.15□□□□□ -0.14
CDH1-213ENST00000612417 LTBRP36941 435 aa14.15□□□□□ -0.14
CDH1-213ENST00000612417 MMP12P39900 470 aa14.15□□□□□ -0.14
CDH1-213ENST00000612417 EIF2DP41214 584 aaKnown RBP14.15□□□□□ -0.14
CDH1-213ENST00000612417 HNF4AP41235 474 aa14.15□□□□□ -0.14
CDH1-213ENST00000612417 WASP42768 502 aa14.15□□□□□ -0.14
CDH1-213ENST00000612417 CLK3P49761 638 aaKnown RBP14.15□□□□□ -0.14
CDH1-213ENST00000612417 ITGA1P56199 1179 aa14.15□□□□□ -0.14
CDH1-213ENST00000612417 VLDLRP98155 873 aa14.15□□□□□ -0.14
CDH1-213ENST00000612417 SPCS2Q15005 226 aa14.15□□□□□ -0.14
CDH1-213ENST00000612417 EGFLAMQ63HQ2 1017 aa14.15□□□□□ -0.14
CDH1-213ENST00000612417 GRHL2Q6ISB3 625 aa14.15□□□□□ -0.14
CDH1-213ENST00000612417 CCDC80Q76M96 950 aa14.15□□□□□ -0.14
CDH1-213ENST00000612417 B3GNT8Q7Z7M8 397 aa14.15□□□□□ -0.14
CDH1-213ENST00000612417 DSG4Q86SJ6 1040 aa14.15□□□□□ -0.14
CDH1-213ENST00000612417 MMAAQ8IVH4 418 aaKnown RBP14.15□□□□□ -0.14
CDH1-213ENST00000612417 SYNPOQ8N3V7 929 aa14.15□□□□□ -0.14
CDH1-213ENST00000612417 ATL1Q8WXF7 558 aa14.15□□□□□ -0.14
CDH1-213ENST00000612417 ARRDC3Q96B67 414 aa14.15□□□□□ -0.14
CDH1-213ENST00000612417 PPP1R16AQ96I34 528 aa14.15□□□□□ -0.14
CDH1-213ENST00000612417 FAM129BQ96TA1 746 aa14.15□□□□□ -0.14
CDH1-213ENST00000612417 RIOK2Q9BVS4 552 aaKnown RBP14.15□□□□□ -0.14
CDH1-213ENST00000612417 CHST8Q9H2A9 424 aa14.15□□□□□ -0.14
CDH1-213ENST00000612417 TMEM165Q9HC07 324 aa14.15□□□□□ -0.14
CDH1-213ENST00000612417 RAD18Q9NS91 495 aa14.15□□□□□ -0.14
CDH1-213ENST00000612417 THAP10Q9P2Z0 257 aaPredicted RBP14.15□□□□□ -0.14
CDH1-213ENST00000612417 NDRG4Q9ULP0 352 aaKnown RBP14.15□□□□□ -0.14
CDH1-213ENST00000612417 TPRKBQ9Y3C4 175 aa14.15□□□□□ -0.14
CDH1-213ENST00000612417 PCDHB11Q9Y5F2 797 aa14.15□□□□□ -0.14
CDH1-213ENST00000612417 MTCH2Q9Y6C9 303 aa14.15□□□□□ -0.14
CDH1-213ENST00000612417 KRT87PA6NCN2 255 aa14.14□□□□□ -0.15
CDH1-213ENST00000612417 ARHGEF33A8MVX0 844 aa14.14□□□□□ -0.15
CDH1-213ENST00000612417 E9PQ18 207 aa14.14□□□□□ -0.15
CDH1-213ENST00000612417 SCAMP2O15127 329 aaKnown RBP14.14□□□□□ -0.15
CDH1-213ENST00000612417 ASMTP46597 345 aa14.14□□□□□ -0.15
CDH1-213ENST00000612417 MLLT10P55197 1068 aa14.14□□□□□ -0.15
CDH1-213ENST00000612417 GTF2H3Q13889 308 aa14.14□□□□□ -0.15
CDH1-213ENST00000612417 XKR6Q5GH73 641 aa14.14□□□□□ -0.15
CDH1-213ENST00000612417 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.14□□□□□ -0.15
CDH1-213ENST00000612417 GALNT18Q6P9A2 607 aa14.14□□□□□ -0.15
CDH1-213ENST00000612417 DCDC5Q6ZRR9 648 aa14.14□□□□□ -0.15
CDH1-213ENST00000612417 ZNF621Q6ZSS3 439 aa14.14□□□□□ -0.15
CDH1-213ENST00000612417 GALNT5Q7Z7M9 940 aa14.14□□□□□ -0.15
CDH1-213ENST00000612417 THOC6Q86W42 341 aaKnown RBP14.14□□□□□ -0.15
CDH1-213ENST00000612417 RNF175Q8N4F7 328 aa14.14□□□□□ -0.15
CDH1-213ENST00000612417 TRAM1L1Q8N609 369 aa14.14□□□□□ -0.15
CDH1-213ENST00000612417 SLC15A4Q8N697 577 aa14.14□□□□□ -0.15
CDH1-213ENST00000612417 CHPT1Q8WUD6 406 aa14.14□□□□□ -0.15
CDH1-213ENST00000612417 HSH2DQ96JZ2 352 aa14.14□□□□□ -0.15
CDH1-213ENST00000612417 COX4I2Q96KJ9 171 aa14.14□□□□□ -0.15
CDH1-213ENST00000612417 APOL4Q9BPW4 351 aa14.14□□□□□ -0.15
CDH1-213ENST00000612417 ARPC5LQ9BPX5 153 aa14.14□□□□□ -0.15
CDH1-213ENST00000612417 EXD2Q9NVH0 621 aa14.14□□□□□ -0.15
CDH1-213ENST00000612417 BTNL2Q9UIR0 455 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms