RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 SPATA7Q9P0W8 599 aa6.15□□□□□ -1.43
SNX13-213ENST00000611725 HCN4Q9Y3Q4 1203 aa6.15□□□□□ -1.43
SNX13-213ENST00000611725 EFCAB10A6NFE3 127 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 H7BY64 318 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 RTCAO00442 366 aaKnown RBP6.14□□□□□ -1.43
SNX13-213ENST00000611725 SLC28A2O43868 658 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 IL3P08700 152 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 NUDT7P0C024 238 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 AMD1P17707 334 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 CRHBPP24387 322 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 DCST1Q5T197 706 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 DEPDC1Q5TB30 811 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 HEATR4Q86WZ0 1026 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 SMYD1Q8NB12 490 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 ZFYVE19Q96K21 471 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 PRAP1Q96NZ9 151 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 PCBD2Q9H0N5 130 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 TPK1Q9H3S4 243 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 C11orf49Q9H6J7 331 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 NEUROD4Q9HD90 331 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 OGDHLQ9ULD0 1010 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 MAN2B2Q9Y2E5 1009 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 PRKAB1Q9Y478 270 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 CFAP20Q9Y6A4 193 aaKnown RBP6.14□□□□□ -1.43
SNX13-213ENST00000611725 ARFGEF1Q9Y6D6 1849 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 TRIM64CA6NLI5 447 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 UGT2B17O75795 530 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 HSD17B2P37059 387 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 ADARB1P78563 741 aaKnown RBP6.14□□□□□ -1.43
SNX13-213ENST00000611725 PTSQ03393 145 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 GANABQ14697 944 aaKnown RBP6.14□□□□□ -1.43
SNX13-213ENST00000611725 TCEA2Q15560 299 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 HNRNPA1L2Q32P51 320 aaKnown RBP6.14□□□□□ -1.43
SNX13-213ENST00000611725 PARS2Q7L3T8 475 aaKnown RBP6.14□□□□□ -1.43
SNX13-213ENST00000611725 ANKRD33Q7Z3H0 272 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 RASSF5Q8WWW0 418 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 GEMIN6Q8WXD5 167 aaKnown RBP6.14□□□□□ -1.43
SNX13-213ENST00000611725 NEIL2Q969S2 332 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 DACT3Q96B18 629 aaPredicted RBP6.14□□□□□ -1.43
SNX13-213ENST00000611725 C12orf66Q96MD2 445 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 FUNDC2Q9BWH2 189 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 NAA50Q9GZZ1 169 aaKnown RBP6.14□□□□□ -1.43
SNX13-213ENST00000611725 IL1RAPQ9NPH3 570 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 SEMA3GQ9NS98 782 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 SELENONQ9NZV5 590 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 TBC1D3DA0A087WVF3 549 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 TBC1D3IA0A087WXS9 549 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 TBC1D3EA0A087X179 549 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 TBC1D3KA0A087X1G2 549 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 TBC1D3FA6NER0 549 aaPredicted RBP6.14□□□□□ -1.43
SNX13-213ENST00000611725 HIDE1A8MVS5 230 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 TBC1D3LB9A6J9 549 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 TAPBPO15533 448 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 TBC1D3HP0C7X1 549 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 ALOX12P18054 663 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 CDH3P22223 829 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 GSTM2P28161 218 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 PDHA2P29803 388 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 BMXP51813 675 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 EMP3P54852 163 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 SFSWAPQ12872 951 aaKnown RBP6.14□□□□□ -1.43
SNX13-213ENST00000611725 TBC1D3GQ6DHY5 549 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 TBC1D3CQ6IPX1 549 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 REEP3Q6NUK4 255 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 TSPYL5Q86VY4 417 aaPredicted RBP6.14□□□□□ -1.43
SNX13-213ENST00000611725 RNF130Q86XS8 419 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 CCDC103Q8IW40 242 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 TBC1D3Q8IZP1 549 aaPredicted RBP6.14□□□□□ -1.43
SNX13-213ENST00000611725 SLC34A3Q8N130 599 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 NATD1Q8N6N6 113 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 ST13P5Q8NFI4 369 aaPredicted RBP6.14□□□□□ -1.43
SNX13-213ENST00000611725 RAB8BQ92930 207 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 SLC38A4Q969I6 547 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 ZNF689Q96CS4 500 aaPredicted RBP6.14□□□□□ -1.43
SNX13-213ENST00000611725 COX4I2Q96KJ9 171 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 IL4I1Q96RQ9 567 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 ERVK-18Q9QC07 812 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 CLCA2Q9UQC9 943 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 COQ6Q9Y2Z9 468 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 RWDD3Q9Y3V2 267 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 PCDHGB5Q9Y5G0 923 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 C6P13671 934 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 MYL12AP19105 171 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 NRIP1P48552 1158 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 PSMD7P51665 324 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 VLDLRP98155 873 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 FPGSQ05932 587 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.14□□□□□ -1.43
SNX13-213ENST00000611725 Q6ZNX1 250 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 SPARTQ8N0X7 666 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 POC5Q8NA72 575 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 ADAMTS16Q8TE57 1224 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 ADAMTS15Q8TE58 950 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 CXorf40BQ96DE9 158 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 NPLQ9BXD5 320 aaPredicted RBP6.14□□□□□ -1.43
SNX13-213ENST00000611725 IGFLR1Q9H665 355 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 PALMDQ9NP74 551 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 ACSL6Q9UKU0 697 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 TMEM98Q9Y2Y6 226 aa6.14□□□□□ -1.43
SNX13-213ENST00000611725 SPTA1P02549 2419 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms