RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	MUL1	Q969V5	352 aa		13.38	□□□□□ -0.27
COPS7B-223	ENST00000611614	FBXL8	Q96CD0	374 aa		13.38	□□□□□ -0.27
COPS7B-223	ENST00000611614	APIP	Q96GX9	242 aa		13.38	□□□□□ -0.27
COPS7B-223	ENST00000611614	FRG2B	Q96QU4	278 aa		13.38	□□□□□ -0.27
COPS7B-223	ENST00000611614	HMG20A	Q9NP66	347 aa		13.38	□□□□□ -0.27
COPS7B-223	ENST00000611614	DCAF13	Q9NV06	445 aa	Known RBP	13.38	□□□□□ -0.27
COPS7B-223	ENST00000611614	SERGEF	Q9UGK8	458 aa		13.38	□□□□□ -0.27
COPS7B-223	ENST00000611614	PPT2	Q9UMR5	302 aa		13.38	□□□□□ -0.27
COPS7B-223	ENST00000611614	UNC80	Q8N2C7	3258 aa		13.38	□□□□□ -0.27
COPS7B-223	ENST00000611614		G3V2T6	193 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614		J3QRK9	145 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614		K7ESM1	405 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	PRKD3	O94806	890 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	AMD1	P17707	334 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	ITIH1	P19827	911 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	HAL	P42357	657 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	PLA2G16	P53816	162 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	PFN3	P60673	137 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	RPS3A	P61247	264 aa	Known RBP	13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	CHIT1	Q13231	466 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	TRIM16L	Q309B1	348 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	ZIK1	Q3SY52	487 aa	Predicted RBP	13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	C6orf141	Q5SZD1	244 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	KIAA1161	Q6NSJ0	714 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	TMEM220	Q6QAJ8	160 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	KIAA1324	Q6UXG2	1013 aa	Known RBP	13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	MSANTD1	Q6ZTZ1	278 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	CHST15	Q7LFX5	561 aa	Predicted RBP	13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	R3HCC1L	Q7Z5L2	792 aa	Known RBP	13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	IGFN1	Q86VF2	1251 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	RASGEF1A	Q8N9B8	481 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	BPIFB6	Q8NFQ5	453 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	NCLN	Q969V3	563 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	TMEM159	Q96B96	161 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	ZNF514	Q96K75	400 aa	Predicted RBP	13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	INPP5K	Q9BT40	448 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	MRO	Q9BYG7	248 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	ATG10	Q9H0Y0	220 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	MAGIX	Q9H6Y5	334 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	TRIM39	Q9HCM9	518 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	INIP	Q9NRY2	104 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	ENPP5	Q9UJA9	477 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	SNX5	Q9Y5X3	404 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	TBC1D3D	A0A087WVF3	549 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	TBC1D3I	A0A087WXS9	549 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	TBC1D3E	A0A087X179	549 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	TBC1D3K	A0A087X1G2	549 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	TBC1D3F	A6NER0	549 aa	Predicted RBP	13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	TBC1D3L	B9A6J9	549 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	PCCB	P05166	539 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	ALOX5	P09917	674 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	TBC1D3H	P0C7X1	549 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	COL9A1	P20849	921 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	PTPN6	P29350	595 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	TPD52	P55327	224 aa	Predicted RBP	13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	ITGAD	Q13349	1161 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	CCIN	Q13939	588 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	IER5L	Q5T953	404 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	TBC1D3G	Q6DHY5	549 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	TBC1D3C	Q6IPX1	549 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	ANKRD13B	Q86YJ7	626 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	TRAPPC5	Q8IUR0	188 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	TBC1D3	Q8IZP1	549 aa	Predicted RBP	13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	ABHD11	Q8NFV4	315 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	FCRL1	Q96LA6	429 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	APOLD1	Q96LR9	279 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	HHIP	Q96QV1	700 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	CCM2	Q9BSQ5	444 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	SLC6A17	Q9H1V8	727 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	OR2AG1	Q9H205	316 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	EPHX3	Q9H6B9	360 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	FAM8A1	Q9UBU6	413 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	FZD4	Q9ULV1	537 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	CORIN	Q9Y5Q5	1042 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	MAGED1	Q9Y5V3	778 aa	Predicted RBP	13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	CKAP5	Q14008	2032 aa		13.37	□□□□□ -0.27
COPS7B-223	ENST00000611614	MYO10	Q9HD67	2058 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	GNGT2	O14610	69 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	PLRG1	O43660	514 aa	Known RBP	13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	VEGFD	O43915	354 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	UGDH	O60701	494 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	SLCO2B1	O94956	709 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	GSN	P06396	782 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	GSTM1	P09488	218 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	IL1RN	P18510	177 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	PRLHR	P49683	370 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	ZNF33B	Q06732	778 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	MLF2	Q15773	248 aa	Predicted RBP	13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	LIPJ	Q5W064	366 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	NOXRED1	Q6NXP6	359 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	PNCK	Q6P2M8	343 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	USP30	Q70CQ3	517 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	ANKRD46	Q86W74	232 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	CHDH	Q8NE62	594 aa	Predicted RBP	13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	NETO1	Q8TDF5	533 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	FKBP10	Q96AY3	582 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	CCDC138	Q96M89	665 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	GUCD1	Q96NT3	240 aa		13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	RBM4B	Q9BQ04	359 aa	Known RBP	13.36	□□□□□ -0.27
COPS7B-223	ENST00000611614	RBM4	Q9BWF3	364 aa	Known RBP	13.36	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms