RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 IRF3Q14653 427 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 STARD3Q14849 445 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 GRIN2CQ14957 1233 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 MAPRE2Q15555 327 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 ATP13A5Q4VNC0 1218 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 PTRHD1Q6GMV3 140 aaKnown RBP15.41■□□□□ 0.06
RTN1-209ENST00000611068 STK32CQ86UX6 486 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 LILRB2Q8N423 598 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 CHFRQ96EP1 664 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 RHNO1Q9BSD3 238 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 WRAP53Q9BUR4 548 aaKnown RBP15.41■□□□□ 0.06
RTN1-209ENST00000611068 TRAF4Q9BUZ4 470 aaPredicted RBP15.41■□□□□ 0.06
RTN1-209ENST00000611068 FBRSL1Q9HCM7 1045 aaKnown RBP15.41■□□□□ 0.06
RTN1-209ENST00000611068 FAM118AQ9NWS6 357 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 ERVK13-1Q9NX77 482 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 MAP10Q9P2G4 905 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 TCRBV5S2A0A599 114 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 EFCAB9A8MZ26 197 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 BTN3A1O00481 513 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 UBDO15205 165 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 SUPT7LO94864 414 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 MSH3P20585 1137 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 MASP1P48740 699 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 ST8SIA6P61647 398 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 FAPQ12884 760 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 DAG1Q14118 895 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 SQLEQ14534 574 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 GAB4Q2WGN9 574 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 ARSKQ6UWY0 536 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 Q6ZVL8 140 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 CNIH3Q8TBE1 160 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 MCOLN3Q8TDD5 553 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 ISG20Q96AZ6 181 aaKnown RBP15.41■□□□□ 0.06
RTN1-209ENST00000611068 OTUB2Q96DC9 234 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 NSUN5Q96P11 429 aaKnown RBP15.41■□□□□ 0.06
RTN1-209ENST00000611068 MBOAT4Q96T53 435 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 FAM83CQ9BQN1 747 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 SLC25A23Q9BV35 468 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 ZNF556Q9HAH1 456 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 MARK1Q9P0L2 795 aa15.41■□□□□ 0.06
RTN1-209ENST00000611068 SUPT3HB4E1H0 165 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 UPK1AO00322 258 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 PLD2O14939 933 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 H2AFYO75367 372 aaKnown RBP15.4■□□□□ 0.06
RTN1-209ENST00000611068 APOA4P06727 396 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 GPIP06744 558 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 KRT20P35900 424 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 CLCA4Q14CN2 919 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 RAB30Q15771 203 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 GLYATQ6IB77 296 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 TPRG1Q6ZUI0 275 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 HSD11B1LQ7Z5J1 315 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 METTL3Q86U44 580 aaKnown RBP15.4■□□□□ 0.06
RTN1-209ENST00000611068 CDH24Q86UP0 819 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 RAB43Q86YS6 212 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 FUNDC1Q8IVP5 155 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 DCBLD1Q8N8Z6 715 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 ST8SIA2Q92186 375 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 LINGO1Q96FE5 620 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 MMP28Q9H239 520 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 SERHL2Q9H4I8 314 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 CLDND1Q9NY35 253 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 IL36AQ9UHA7 158 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 TRMT6Q9UJA5 497 aaKnown RBP15.4■□□□□ 0.06
RTN1-209ENST00000611068 RIMKLBQ9ULI2 386 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 USP22Q9UPT9 525 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 SLCO1B7G3V0H7 640 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 NOBOXO60393 691 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 C1SP09871 688 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 XPAP23025 273 aaPredicted RBP15.4■□□□□ 0.06
RTN1-209ENST00000611068 ATP5F1P24539 256 aaPredicted RBP15.4■□□□□ 0.06
RTN1-209ENST00000611068 IL12RB1P42701 662 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 RFX2P48378 723 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 AGTR2P50052 363 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 BTBD16Q32M84 506 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 C18orf21Q32NC0 220 aaPredicted RBP15.4■□□□□ 0.06
RTN1-209ENST00000611068 ANKRD54Q6NXT1 300 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 PIWIL4Q7Z3Z4 852 aaKnown RBP15.4■□□□□ 0.06
RTN1-209ENST00000611068 HS3ST5Q8IZT8 346 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 PTGR2Q8N8N7 351 aaPredicted RBP15.4■□□□□ 0.06
RTN1-209ENST00000611068 ZNF557Q8N988 423 aaPredicted RBP15.4■□□□□ 0.06
RTN1-209ENST00000611068 ECHDC3Q96DC8 303 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 ITCHQ96J02 903 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 ANAPC2Q9UJX6 822 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 RNF112Q9ULX5 631 aa15.4■□□□□ 0.06
RTN1-209ENST00000611068 ZFC3H1O60293 1989 aaKnown RBP15.39■□□□□ 0.05
RTN1-209ENST00000611068 VPS26AO75436 327 aa15.39■□□□□ 0.05
RTN1-209ENST00000611068 IPO13O94829 963 aaKnown RBP15.39■□□□□ 0.05
RTN1-209ENST00000611068 SLC25A14O95258 325 aaPredicted RBP15.39■□□□□ 0.05
RTN1-209ENST00000611068 WISP3O95389 354 aaPredicted RBP15.39■□□□□ 0.05
RTN1-209ENST00000611068 TIMP2P16035 220 aa15.39■□□□□ 0.05
RTN1-209ENST00000611068 GDI1P31150 447 aa15.39■□□□□ 0.05
RTN1-209ENST00000611068 ZNF45Q02386 682 aa15.39■□□□□ 0.05
RTN1-209ENST00000611068 ARHGEF7Q14155 803 aa15.39■□□□□ 0.05
RTN1-209ENST00000611068 CLEC6AQ6EIG7 209 aa15.39■□□□□ 0.05
RTN1-209ENST00000611068 ETFBKMTQ8IXQ9 262 aa15.39■□□□□ 0.05
RTN1-209ENST00000611068 CD200R1Q8TD46 325 aa15.39■□□□□ 0.05
RTN1-209ENST00000611068 TMBIM1Q969X1 311 aa15.39■□□□□ 0.05
RTN1-209ENST00000611068 TESCQ96BS2 214 aa15.39■□□□□ 0.05
RTN1-209ENST00000611068 RNF145Q96MT1 663 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms