RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 MYBPC3Q14896 1274 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 IRF4Q15306 451 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 CYP2A13Q16696 494 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 C2orf27AQ580R0 203 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 ATAT1Q5SQI0 421 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.07□□□□□ -0.32
NEK3-205ENST00000610828 DUS1LQ6P1R4 473 aaKnown RBP13.07□□□□□ -0.32
NEK3-205ENST00000610828 VTCN1Q7Z7D3 282 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 C17orf64Q86WR6 236 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 OXR1Q8N573 874 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.07□□□□□ -0.32
NEK3-205ENST00000610828 ZFP90Q8TF47 636 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 C16orf78Q8WTQ4 265 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 MAL2Q969L2 176 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 ELSPBP1Q96BH3 223 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 TEX101Q9BY14 249 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 ING2Q9H160 280 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 OSGEPL1Q9H4B0 414 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 SLC28A3Q9HAS3 691 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 SIRT5Q9NXA8 310 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 TUBA8Q9NY65 449 aaPredicted RBP13.07□□□□□ -0.32
NEK3-205ENST00000610828 ZNF282Q9UDV7 671 aaPredicted RBP13.07□□□□□ -0.32
NEK3-205ENST00000610828 ATP6V1HQ9UI12 483 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 RPS6KA6Q9UK32 745 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 ABCG2Q9UNQ0 655 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 LATO43561 262 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 FKBP9O95302 570 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 FURINP09958 794 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 LAMP2P13473 410 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 PPIBP23284 216 aaKnown RBP13.07□□□□□ -0.32
NEK3-205ENST00000610828 MAGEA2P43356 314 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 YAP1P46937 504 aaKnown RBP13.07□□□□□ -0.32
NEK3-205ENST00000610828 GALK1P51570 392 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 CASP9P55211 416 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 HBA1P69905 142 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 ENPP2Q13822 863 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 FGL2Q14314 439 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 RGNQ15493 299 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 BORAQ6PGQ7 559 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 VN1R5Q7Z5H4 357 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 FAM129CQ86XR2 697 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 PIAS4Q8N2W9 510 aaPredicted RBP13.07□□□□□ -0.32
NEK3-205ENST00000610828 METTL4Q8N3J2 472 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 CIDECQ96AQ7 238 aaPredicted RBP13.07□□□□□ -0.32
NEK3-205ENST00000610828 PPCDCQ96CD2 204 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 RDH12Q96NR8 316 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 SORBS1Q9BX66 1292 aaKnown RBP13.07□□□□□ -0.32
NEK3-205ENST00000610828 TRIT1Q9H3H1 467 aaKnown RBP13.07□□□□□ -0.32
NEK3-205ENST00000610828 LTB4R2Q9NPC1 389 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 IL1RAPQ9NPH3 570 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 ZFR2Q9UPR6 939 aaKnown RBP13.07□□□□□ -0.32
NEK3-205ENST00000610828 CORO2BQ9UQ03 480 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 CEPT1Q9Y6K0 416 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 hCG_2039718K7EN88 272 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 C6orf47O95873 294 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 ACP5P13686 325 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 CDH2P19022 906 aaPredicted RBP13.06□□□□□ -0.32
NEK3-205ENST00000610828 PTX3P26022 381 aaPredicted RBP13.06□□□□□ -0.32
NEK3-205ENST00000610828 PSMB5P28074 263 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 ELK4P28324 431 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 AQP1P29972 269 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 CYP4F2P78329 520 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 ROR2Q01974 943 aaKnown RBP13.06□□□□□ -0.32
NEK3-205ENST00000610828 R3HCC1LQ7Z5L2 792 aaKnown RBP13.06□□□□□ -0.32
NEK3-205ENST00000610828 PGBD3Q8N328 593 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 SYNPOQ8N3V7 929 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 ZNF555Q8NEP9 628 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 MRPL38Q96DV4 380 aaKnown RBP13.06□□□□□ -0.32
NEK3-205ENST00000610828 VCX3AQ9NNX9 186 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 CUEDC1Q9NWM3 386 aaPredicted RBP13.06□□□□□ -0.32
NEK3-205ENST00000610828 FAM118AQ9NWS6 357 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 USE1Q9NZ43 259 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 THEGQ9P2T0 379 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 RAPGEFL1Q9UHV5 662 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 FAF1Q9UNN5 650 aaPredicted RBP13.06□□□□□ -0.32
NEK3-205ENST00000610828 DNMT3AQ9Y6K1 912 aaPredicted RBP13.06□□□□□ -0.32
NEK3-205ENST00000610828 DNAH14Q0VDD8 3507 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 CKAP5Q14008 2032 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 TRIM64A6NGJ6 449 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 ANKDD1BA6NHY2 528 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 MYO1GB0I1T2 1018 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 DIRAS1O95057 198 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 FABP3P05413 133 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 ERGP11308 486 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 SHMT2P34897 504 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 TRIM23P36406 574 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 PIGAP37287 484 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 CRATP43155 626 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 TPD52P55327 224 aaPredicted RBP13.06□□□□□ -0.32
NEK3-205ENST00000610828 LRRC74AQ0VAA2 488 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 EPS8Q12929 822 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 SGCGQ13326 291 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 VEZF1Q14119 521 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 ARHGAP19Q14CB8 494 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 CCNYL2Q5T2Q4 361 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 TTC23Q5W5X9 447 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 ZNF776Q68DI1 518 aaPredicted RBP13.06□□□□□ -0.32
NEK3-205ENST00000610828 KIAA1211LQ6NV74 962 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 B3GNT6Q6ZMB0 384 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 TMEM184AQ6ZMB5 413 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms