RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 MIR1-1HGQ9H1L0 117 aa21.56■■□□□ 1.04
SHANK2-220ENST00000608988 DDX28Q9NUL7 540 aaKnown RBP21.56■■□□□ 1.04
SHANK2-220ENST00000608988 CLN6Q9NWW5 311 aa21.56■■□□□ 1.04
SHANK2-220ENST00000608988 H7C4K7 107 aa21.55■■□□□ 1.04
SHANK2-220ENST00000608988 TNFSF8P32971 234 aa21.55■■□□□ 1.04
SHANK2-220ENST00000608988 ARPP19P56211 112 aa21.55■■□□□ 1.04
SHANK2-220ENST00000608988 FKBP1BP68106 108 aa21.55■■□□□ 1.04
SHANK2-220ENST00000608988 MRPS15P82914 257 aaKnown RBP21.55■■□□□ 1.04
SHANK2-220ENST00000608988 RHAGQ02094 409 aa21.55■■□□□ 1.04
SHANK2-220ENST00000608988 LRRC66Q68CR7 880 aa21.55■■□□□ 1.04
SHANK2-220ENST00000608988 SLC24A5Q71RS6 500 aa21.55■■□□□ 1.04
SHANK2-220ENST00000608988 SPATC1Q76KD6 591 aa21.55■■□□□ 1.04
SHANK2-220ENST00000608988 VASH1Q7L8A9 365 aaPredicted RBP21.55■■□□□ 1.04
SHANK2-220ENST00000608988 C1orf52Q8N6N3 182 aaKnown RBP21.55■■□□□ 1.04
SHANK2-220ENST00000608988 B3GNT7Q8NFL0 401 aa21.55■■□□□ 1.04
SHANK2-220ENST00000608988 SPPL2AQ8TCT8 520 aa21.55■■□□□ 1.04
SHANK2-220ENST00000608988 CXorf40BQ96DE9 158 aa21.55■■□□□ 1.04
SHANK2-220ENST00000608988 ST6GAL2Q96JF0 529 aa21.55■■□□□ 1.04
SHANK2-220ENST00000608988 CRISPLD1Q9H336 500 aa21.55■■□□□ 1.04
SHANK2-220ENST00000608988 RNF167Q9H6Y7 350 aa21.55■■□□□ 1.04
SHANK2-220ENST00000608988 MS4A12Q9NXJ0 267 aa21.55■■□□□ 1.04
SHANK2-220ENST00000608988 VPS29Q9UBQ0 182 aa21.55■■□□□ 1.04
SHANK2-220ENST00000608988 VWA8A3KMH1 1905 aa21.55■■□□□ 1.04
SHANK2-220ENST00000608988 STC2O76061 302 aa21.54■■□□□ 1.04
SHANK2-220ENST00000608988 MFN2O95140 757 aa21.54■■□□□ 1.04
SHANK2-220ENST00000608988 NUDT6P53370 316 aa21.54■■□□□ 1.04
SHANK2-220ENST00000608988 FAM189BP81408 668 aa21.54■■□□□ 1.04
SHANK2-220ENST00000608988 KCNC3Q14003 757 aa21.54■■□□□ 1.04
SHANK2-220ENST00000608988 TSTQ16762 297 aaKnown RBP21.54■■□□□ 1.04
SHANK2-220ENST00000608988 CPTPQ5TA50 214 aa21.54■■□□□ 1.04
SHANK2-220ENST00000608988 PLAG1Q6DJT9 500 aa21.54■■□□□ 1.04
SHANK2-220ENST00000608988 RNF19BQ6ZMZ0 732 aa21.54■■□□□ 1.04
SHANK2-220ENST00000608988 CLECL1Q8IZS7 167 aa21.54■■□□□ 1.04
SHANK2-220ENST00000608988 OR8H2Q8N162 312 aa21.54■■□□□ 1.04
SHANK2-220ENST00000608988 GRPEL2Q8TAA5 225 aa21.54■■□□□ 1.04
SHANK2-220ENST00000608988 ASB11Q8WXH4 323 aa21.54■■□□□ 1.04
SHANK2-220ENST00000608988 TRIM63Q969Q1 353 aa21.54■■□□□ 1.04
SHANK2-220ENST00000608988 DEPDC7Q96QD5 511 aa21.54■■□□□ 1.04
SHANK2-220ENST00000608988 EBPLQ9BY08 206 aa21.54■■□□□ 1.04
SHANK2-220ENST00000608988 AMBNQ9NP70 447 aa21.54■■□□□ 1.04
SHANK2-220ENST00000608988 SPATA6Q9NWH7 488 aaPredicted RBP21.54■■□□□ 1.04
SHANK2-220ENST00000608988 FAM25AB3EWG3 89 aa21.54■■□□□ 1.04
SHANK2-220ENST00000608988 FAM25CB3EWG5 89 aa21.54■■□□□ 1.04
SHANK2-220ENST00000608988 FAM25GB3EWG6 89 aa21.54■■□□□ 1.04
SHANK2-220ENST00000608988 NBNO60934 754 aa21.54■■□□□ 1.04
SHANK2-220ENST00000608988 KLKB1P03952 638 aa21.54■■□□□ 1.04
SHANK2-220ENST00000608988 ATF6P18850 670 aa21.54■■□□□ 1.04
SHANK2-220ENST00000608988 CYP2A7P20853 494 aa21.54■■□□□ 1.04
SHANK2-220ENST00000608988 CHMP24386 653 aa21.54■■□□□ 1.04
SHANK2-220ENST00000608988 SPIBQ01892 262 aa21.54■■□□□ 1.04
SHANK2-220ENST00000608988 PTCHD3Q3KNS1 767 aa21.54■■□□□ 1.04
SHANK2-220ENST00000608988 SOWAHCQ53LP3 525 aaPredicted RBP21.54■■□□□ 1.04
SHANK2-220ENST00000608988 ARMC4Q5T2S8 1044 aa21.54■■□□□ 1.04
SHANK2-220ENST00000608988 TPGS1Q6ZTW0 290 aa21.54■■□□□ 1.04
SHANK2-220ENST00000608988 NPAS3Q8IXF0 933 aa21.54■■□□□ 1.04
SHANK2-220ENST00000608988 CFAP20Q9Y6A4 193 aaKnown RBP21.54■■□□□ 1.04
SHANK2-220ENST00000608988 LATS1O95835 1130 aa21.53■■□□□ 1.04
SHANK2-220ENST00000608988 OR56A5P0C7T3 313 aa21.53■■□□□ 1.04
SHANK2-220ENST00000608988 HSMCR30P0CW71 290 aa21.53■■□□□ 1.04
SHANK2-220ENST00000608988 LAMP1P11279 417 aa21.53■■□□□ 1.04
SHANK2-220ENST00000608988 HMGA2P52926 109 aa21.53■■□□□ 1.04
SHANK2-220ENST00000608988 CHRNEQ04844 493 aa21.53■■□□□ 1.04
SHANK2-220ENST00000608988 BCL2L1Q07817 233 aa21.53■■□□□ 1.04
SHANK2-220ENST00000608988 MBTPS1Q14703 1052 aa21.53■■□□□ 1.04
SHANK2-220ENST00000608988 ATXN7L2Q5T6C5 722 aaPredicted RBP21.53■■□□□ 1.04
SHANK2-220ENST00000608988 MEDAGQ5VYS4 303 aa21.53■■□□□ 1.04
SHANK2-220ENST00000608988 FAM92BQ6ZTR7 304 aa21.53■■□□□ 1.04
SHANK2-220ENST00000608988 SAPCD2Q86UD0 394 aa21.53■■□□□ 1.04
SHANK2-220ENST00000608988 FAM181AQ8N9Y4 354 aa21.53■■□□□ 1.04
SHANK2-220ENST00000608988 UTP15Q8TED0 518 aaKnown RBP21.53■■□□□ 1.04
SHANK2-220ENST00000608988 COQ8BQ96D53 544 aa21.53■■□□□ 1.04
SHANK2-220ENST00000608988 MARCH7Q9H992 704 aa21.53■■□□□ 1.04
SHANK2-220ENST00000608988 BRF2Q9HAW0 419 aa21.53■■□□□ 1.04
SHANK2-220ENST00000608988 SEC14L4Q9UDX3 406 aa21.53■■□□□ 1.04
SHANK2-220ENST00000608988 STOML2Q9UJZ1 356 aa21.53■■□□□ 1.04
SHANK2-220ENST00000608988 NOD1Q9Y239 953 aa21.53■■□□□ 1.04
SHANK2-220ENST00000608988 HCN4Q9Y3Q4 1203 aa21.53■■□□□ 1.04
SHANK2-220ENST00000608988 ARHGAP33O14559 1287 aa21.52■■□□□ 1.04
SHANK2-220ENST00000608988 SEMA3DO95025 777 aa21.52■■□□□ 1.04
SHANK2-220ENST00000608988 IFNA14P01570 189 aa21.52■■□□□ 1.04
SHANK2-220ENST00000608988 C1QCP02747 245 aa21.52■■□□□ 1.04
SHANK2-220ENST00000608988 DNTTP04053 509 aa21.52■■□□□ 1.04
SHANK2-220ENST00000608988 SCG5P05408 212 aa21.52■■□□□ 1.04
SHANK2-220ENST00000608988 ACSM2AQ08AH3 577 aa21.52■■□□□ 1.04
SHANK2-220ENST00000608988 FCHO2Q0JRZ9 810 aa21.52■■□□□ 1.04
SHANK2-220ENST00000608988 EXOC3L2Q2M3D2 409 aa21.52■■□□□ 1.04
SHANK2-220ENST00000608988 ACSM2BQ68CK6 577 aa21.52■■□□□ 1.04
SHANK2-220ENST00000608988 C16orf59Q7L2K0 433 aa21.52■■□□□ 1.04
SHANK2-220ENST00000608988 NRARPQ7Z6K4 114 aa21.52■■□□□ 1.04
SHANK2-220ENST00000608988 SH3KBP1Q96B97 665 aa21.52■■□□□ 1.04
SHANK2-220ENST00000608988 C11orf24Q96F05 449 aaPredicted RBP21.52■■□□□ 1.04
SHANK2-220ENST00000608988 LYSMD1Q96S90 227 aa21.52■■□□□ 1.04
SHANK2-220ENST00000608988 PHOX2BQ99453 314 aa21.52■■□□□ 1.04
SHANK2-220ENST00000608988 OR51B4Q9Y5P0 310 aa21.52■■□□□ 1.04
SHANK2-220ENST00000608988 ZNF840PA6NDX5 716 aa21.52■■□□□ 1.03
SHANK2-220ENST00000608988 RNASET2O00584 256 aaKnown RBP21.52■■□□□ 1.03
SHANK2-220ENST00000608988 CTDSP2O14595 271 aa21.52■■□□□ 1.03
SHANK2-220ENST00000608988 COCHO43405 550 aa21.52■■□□□ 1.03
SHANK2-220ENST00000608988 GCM2O75603 506 aaPredicted RBP21.52■■□□□ 1.03
SHANK2-220ENST00000608988 CCNB2O95067 398 aa21.52■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms