RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 HK3P52790 923 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 AIF1P55008 147 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 PTPN11Q06124 597 aaPredicted RBP12.14□□□□□ -0.47
CTCFL-218ENST00000608440 HNRNPA0Q13151 305 aaKnown RBP12.14□□□□□ -0.47
CTCFL-218ENST00000608440 P2RY14Q15391 338 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 VASNQ6EMK4 673 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 NLRC3Q7RTR2 1065 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 C4orf19Q8IY42 314 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 ZNF548Q8NEK5 533 aaPredicted RBP12.14□□□□□ -0.47
CTCFL-218ENST00000608440 OR52K2Q8NGK3 314 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 PROKR1Q8TCW9 393 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 TRMOQ9BU70 441 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 B3GNT5Q9BYG0 378 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 SEMA4BQ9NPR2 832 aaPredicted RBP12.14□□□□□ -0.47
CTCFL-218ENST00000608440 NIT2Q9NQR4 276 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 ZFR2Q9UPR6 939 aaKnown RBP12.14□□□□□ -0.47
CTCFL-218ENST00000608440 SYNJ2BP-COX16A0A087WUM0 186 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 SLC35F4A4IF30 521 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 TRABD2BA6NFA1 517 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 AOC2O75106 756 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 ADRA2AP08913 450 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 GJA5P36382 358 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 FGL2Q14314 439 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 DPYSL2Q16555 572 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 PFKFB4Q16877 469 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 HFEQ30201 348 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 UNC5DQ6UXZ4 953 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 TMEM145Q8NBT3 493 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 NXPE2Q96DL1 559 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 DPYSL5Q9BPU6 564 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 RC3H2Q9HBD1 1191 aaKnown RBP12.14□□□□□ -0.47
CTCFL-218ENST00000608440 ZDHHC4Q9NPG8 344 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 PXMP2Q9NR77 195 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 COX16Q9P0S2 106 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 ARID2Q68CP9 1835 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 A0A0G2JPF8 293 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 HNRNPCL3B7ZW38 293 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 E2F3O00716 465 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 FFAR3O14843 346 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 GPR42O15529 346 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 EIF1BO60739 113 aaKnown RBP12.13□□□□□ -0.47
CTCFL-218ENST00000608440 EIF3GO75821 320 aaKnown RBP eCLIP12.13□□□□□ -0.47
CTCFL-218ENST00000608440 PRAMEF1O95521 474 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 FAM157BP0CG42 384 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 RD3LP0DJH9 198 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 HNRNPCL4P0DMR1 293 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 ANXA3P12429 323 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 RAB3BP20337 219 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 ACADLP28330 430 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 PRKAR1BP31321 381 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 ARL4AP40617 200 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 EIF1P41567 113 aaKnown RBP12.13□□□□□ -0.47
CTCFL-218ENST00000608440 PREPP48147 710 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 KIAA1024LP59773 190 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 ERVK-25P63136 954 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 PRKG2Q13237 762 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 PGM5Q15124 567 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 PYHIN1Q6K0P9 492 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 USP45Q70EL2 814 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 TSPEARQ8WU66 669 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 TMEM143Q96AN5 459 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 MRPL48Q96GC5 212 aaKnown RBP12.13□□□□□ -0.47
CTCFL-218ENST00000608440 ZNF285Q96NJ3 590 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 HBEGFQ99075 208 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 PDCD2LQ9BRP1 358 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 ELOVL4Q9GZR5 314 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 B3GAT2Q9NPZ5 323 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 MAP3K20Q9NYL2 800 aaKnown RBP12.13□□□□□ -0.47
CTCFL-218ENST00000608440 RRN3P2A6NIE6 340 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 CXCL11O14625 94 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 SEC14L5O43304 696 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 CREG1O75629 220 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 EDN1P05305 212 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 POU3F2P20265 443 aaPredicted RBP12.13□□□□□ -0.47
CTCFL-218ENST00000608440 DNASE1P24855 282 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 PTAFRP25105 342 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 CAPZA1P52907 286 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 CAMK2GQ13555 558 aaPredicted RBP12.13□□□□□ -0.47
CTCFL-218ENST00000608440 MTMR1Q13613 665 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 KYAT1Q16773 422 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 MPEG1Q2M385 716 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 TKFCQ3LXA3 575 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 PRAMEF19Q5SWL8 479 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 FAM171A1Q5VUB5 890 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 KIAA0319Q5VV43 1072 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 KDELC2Q7Z4H8 507 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 FAM131BQ86XD5 332 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 FAM181AQ8N9Y4 354 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 OR2T4Q8NH00 348 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 GOT1L1Q8NHS2 421 aaPredicted RBP12.13□□□□□ -0.47
CTCFL-218ENST00000608440 NSMAFQ92636 917 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 ELP4Q96EB1 424 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 ERVK-6Q9BXR3 956 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 PRDM9Q9NQV7 894 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 DCAF13Q9NV06 445 aaKnown RBP12.13□□□□□ -0.47
CTCFL-218ENST00000608440 BABAM2Q9NXR7 383 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 SLCO1C1Q9NYB5 712 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 COMMD3Q9UBI1 195 aa12.13□□□□□ -0.47
CTCFL-218ENST00000608440 FAM234BA2RU67 622 aa12.12□□□□□ -0.47
CTCFL-218ENST00000608440 PMS2P1A4D2B8 440 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms