RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 PRMT8Q9NR22 394 aaPredicted RBP20.64■□□□□ 0.9
USP6NL-204ENST00000606752 ACTR10Q9NZ32 417 aa20.64■□□□□ 0.9
USP6NL-204ENST00000606752 DOLKQ9UPQ8 538 aa20.64■□□□□ 0.9
USP6NL-204ENST00000606752 MAN2B2Q9Y2E5 1009 aa20.64■□□□□ 0.9
USP6NL-204ENST00000606752 AP1M2Q9Y6Q5 423 aa20.64■□□□□ 0.9
USP6NL-204ENST00000606752 H0Y3Z8 333 aa20.64■□□□□ 0.89
USP6NL-204ENST00000606752 SCAMP2O15127 329 aaKnown RBP20.64■□□□□ 0.89
USP6NL-204ENST00000606752 YY2O15391 372 aa20.64■□□□□ 0.89
USP6NL-204ENST00000606752 FKBP6O75344 327 aa20.64■□□□□ 0.89
USP6NL-204ENST00000606752 HSD17B1P14061 328 aa20.64■□□□□ 0.89
USP6NL-204ENST00000606752 UGT2B7P16662 529 aa20.64■□□□□ 0.89
USP6NL-204ENST00000606752 TRAP1Q12931 704 aaKnown RBP20.64■□□□□ 0.89
USP6NL-204ENST00000606752 RABL3Q5HYI8 236 aa20.64■□□□□ 0.89
USP6NL-204ENST00000606752 AAGABQ6PD74 315 aa20.64■□□□□ 0.89
USP6NL-204ENST00000606752 PAGE2Q7Z2X7 111 aa20.64■□□□□ 0.89
USP6NL-204ENST00000606752 WDR5BQ86VZ2 330 aa20.64■□□□□ 0.89
USP6NL-204ENST00000606752 PAQR7Q86WK9 346 aa20.64■□□□□ 0.89
USP6NL-204ENST00000606752 SDR16C5Q8N3Y7 309 aa20.64■□□□□ 0.89
USP6NL-204ENST00000606752 AVL9Q8NBF6 648 aa20.64■□□□□ 0.89
USP6NL-204ENST00000606752 OR10G6Q8NH81 332 aa20.64■□□□□ 0.89
USP6NL-204ENST00000606752 RGMAQ96B86 450 aa20.64■□□□□ 0.89
USP6NL-204ENST00000606752 PPM1MQ96MI6 270 aa20.64■□□□□ 0.89
USP6NL-204ENST00000606752 NECAB3Q96P71 396 aaPredicted RBP20.64■□□□□ 0.89
USP6NL-204ENST00000606752 KCNH6Q9H252 994 aa20.64■□□□□ 0.89
USP6NL-204ENST00000606752 SERHLQ9NQF3 203 aa20.64■□□□□ 0.89
USP6NL-204ENST00000606752 KLHL20Q9Y2M5 609 aa20.64■□□□□ 0.89
USP6NL-204ENST00000606752 GSAPA4D1B5 854 aa20.63■□□□□ 0.89
USP6NL-204ENST00000606752 GABRR3A8MPY1 467 aa20.63■□□□□ 0.89
USP6NL-204ENST00000606752 C2orf74A8MZ97 194 aa20.63■□□□□ 0.89
USP6NL-204ENST00000606752 TNFSF14O43557 240 aa20.63■□□□□ 0.89
USP6NL-204ENST00000606752 ERN1O75460 977 aaKnown RBP20.63■□□□□ 0.89
USP6NL-204ENST00000606752 KLHL18O94889 574 aa20.63■□□□□ 0.89
USP6NL-204ENST00000606752 HPCAL1P37235 193 aa20.63■□□□□ 0.89
USP6NL-204ENST00000606752 RCN1Q15293 331 aa20.63■□□□□ 0.89
USP6NL-204ENST00000606752 ZIC1Q15915 447 aa20.63■□□□□ 0.89
USP6NL-204ENST00000606752 OR4F3Q6IEY1 312 aa20.63■□□□□ 0.89
USP6NL-204ENST00000606752 CAMKMTQ7Z624 323 aa20.63■□□□□ 0.89
USP6NL-204ENST00000606752 MFSD9Q8NBP5 474 aa20.63■□□□□ 0.89
USP6NL-204ENST00000606752 HIPK4Q8NE63 616 aa20.63■□□□□ 0.89
USP6NL-204ENST00000606752 TRPV3Q8NET8 790 aa20.63■□□□□ 0.89
USP6NL-204ENST00000606752 OR8J3Q8NGG0 315 aa20.63■□□□□ 0.89
USP6NL-204ENST00000606752 SLC26A7Q8TE54 656 aa20.63■□□□□ 0.89
USP6NL-204ENST00000606752 C16orf78Q8WTQ4 265 aa20.63■□□□□ 0.89
USP6NL-204ENST00000606752 QRFPRQ96P65 431 aa20.63■□□□□ 0.89
USP6NL-204ENST00000606752 ZNF717Q9BY31 904 aaPredicted RBP20.63■□□□□ 0.89
USP6NL-204ENST00000606752 REXO4Q9GZR2 422 aaKnown RBP20.63■□□□□ 0.89
USP6NL-204ENST00000606752 MYNNQ9NPC7 610 aa20.63■□□□□ 0.89
USP6NL-204ENST00000606752 TDRD6O60522 2096 aaKnown RBP20.63■□□□□ 0.89
USP6NL-204ENST00000606752 LRIT2A6NDA9 550 aa20.62■□□□□ 0.89
USP6NL-204ENST00000606752 ZW10O43264 779 aa20.62■□□□□ 0.89
USP6NL-204ENST00000606752 AQP9O43315 295 aa20.62■□□□□ 0.89
USP6NL-204ENST00000606752 SERPIND1P05546 499 aa20.62■□□□□ 0.89
USP6NL-204ENST00000606752 TDGF1P13385 188 aa20.62■□□□□ 0.89
USP6NL-204ENST00000606752 TPP2P29144 1249 aaPredicted RBP20.62■□□□□ 0.89
USP6NL-204ENST00000606752 BSGP35613 385 aa20.62■□□□□ 0.89
USP6NL-204ENST00000606752 EEFSECP57772 596 aaKnown RBP20.62■□□□□ 0.89
USP6NL-204ENST00000606752 TMEM35AQ53FP2 167 aa20.62■□□□□ 0.89
USP6NL-204ENST00000606752 TMEM132CQ8N3T6 1108 aa20.62■□□□□ 0.89
USP6NL-204ENST00000606752 COQ8BQ96D53 544 aa20.62■□□□□ 0.89
USP6NL-204ENST00000606752 ANKRD27Q96NW4 1050 aa20.62■□□□□ 0.89
USP6NL-204ENST00000606752 TRIM8Q9BZR9 551 aa20.62■□□□□ 0.89
USP6NL-204ENST00000606752 PCDHAC1Q9H158 963 aa20.62■□□□□ 0.89
USP6NL-204ENST00000606752 HRASLS2Q9NWW9 162 aa20.62■□□□□ 0.89
USP6NL-204ENST00000606752 FAM120CQ9NX05 1096 aaKnown RBP20.62■□□□□ 0.89
USP6NL-204ENST00000606752 VAPAQ9P0L0 249 aa20.62■□□□□ 0.89
USP6NL-204ENST00000606752 ATP6V1HQ9UI12 483 aa20.62■□□□□ 0.89
USP6NL-204ENST00000606752 PCDHGA4Q9Y5G9 962 aa20.62■□□□□ 0.89
USP6NL-204ENST00000606752 EML5Q05BV3 1969 aa20.62■□□□□ 0.89
USP6NL-204ENST00000606752 A0A096LPI6 279 aa20.62■□□□□ 0.89
USP6NL-204ENST00000606752 NDUFS4O43181 175 aa20.62■□□□□ 0.89
USP6NL-204ENST00000606752 LAMTOR5O43504 91 aa20.62■□□□□ 0.89
USP6NL-204ENST00000606752 DFNA5O60443 496 aa20.62■□□□□ 0.89
USP6NL-204ENST00000606752 FKBP9O95302 570 aa20.62■□□□□ 0.89
USP6NL-204ENST00000606752 CCNYL2Q5T2Q4 361 aa20.62■□□□□ 0.89
USP6NL-204ENST00000606752 LRIF1Q5T3J3 769 aa20.62■□□□□ 0.89
USP6NL-204ENST00000606752 CPTPQ5TA50 214 aa20.62■□□□□ 0.89
USP6NL-204ENST00000606752 ZNF548Q8NEK5 533 aaPredicted RBP20.62■□□□□ 0.89
USP6NL-204ENST00000606752 SORBS1Q9BX66 1292 aaKnown RBP20.62■□□□□ 0.89
USP6NL-204ENST00000606752 ZMYND15Q9H091 742 aa20.62■□□□□ 0.89
USP6NL-204ENST00000606752 REEP4Q9H6H4 257 aa20.62■□□□□ 0.89
USP6NL-204ENST00000606752 EXO1Q9UQ84 846 aaKnown RBP20.62■□□□□ 0.89
USP6NL-204ENST00000606752 BTBD3Q9Y2F9 522 aa20.62■□□□□ 0.89
USP6NL-204ENST00000606752 OR2A25A4D2G3 310 aa20.61■□□□□ 0.89
USP6NL-204ENST00000606752 LMO7DNF2Z398 122 aa20.61■□□□□ 0.89
USP6NL-204ENST00000606752 CAPN5O15484 640 aaPredicted RBP20.61■□□□□ 0.89
USP6NL-204ENST00000606752 SCN2BO60939 215 aa20.61■□□□□ 0.89
USP6NL-204ENST00000606752 LAMP1P11279 417 aa20.61■□□□□ 0.89
USP6NL-204ENST00000606752 PIM1P11309 404 aaPredicted RBP20.61■□□□□ 0.89
USP6NL-204ENST00000606752 HOXB3P14651 431 aaPredicted RBP20.61■□□□□ 0.89
USP6NL-204ENST00000606752 RPL3P39023 403 aaKnown RBP20.61■□□□□ 0.89
USP6NL-204ENST00000606752 FASLGP48023 281 aa20.61■□□□□ 0.89
USP6NL-204ENST00000606752 HNRNPFP52597 415 aaKnown RBP20.61■□□□□ 0.89
USP6NL-204ENST00000606752 WNT3P56703 355 aa20.61■□□□□ 0.89
USP6NL-204ENST00000606752 TAS2R50P59544 299 aa20.61■□□□□ 0.89
USP6NL-204ENST00000606752 RPS15AP62244 130 aaKnown RBP20.61■□□□□ 0.89
USP6NL-204ENST00000606752 AP2B1P63010 937 aa20.61■□□□□ 0.89
USP6NL-204ENST00000606752 SLC5A12Q1EHB4 618 aa20.61■□□□□ 0.89
USP6NL-204ENST00000606752 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.61■□□□□ 0.89
USP6NL-204ENST00000606752 FAM71E1Q6IPT2 247 aa20.61■□□□□ 0.89
USP6NL-204ENST00000606752 IKBIPQ70UQ0 350 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms