RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 FAM60AQ9NP50 221 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 MID1IP1Q9NPA3 183 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 ABCF3Q9NUQ8 709 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 SIDT1Q9NXL6 827 aaKnown RBP11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 ZNF490Q9ULM2 529 aaPredicted RBP11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 PLCL2Q9UPR0 1127 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 RNF11Q9Y3C5 154 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 RAP2CQ9Y3L5 183 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 PCDHGA4Q9Y5G9 962 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 AP1M2Q9Y6Q5 423 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 H3BMH7 237 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 FOXE1O00358 373 aaPredicted RBP11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 TXNDC9O14530 226 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 HAT1O14929 419 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 AZIN1O14977 448 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 CLEC3AO75596 197 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 HSPA4LO95757 839 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 KRT6AP02538 564 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 KRT6BP04259 564 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 CHRNGP07510 517 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 UROSP10746 265 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 HGFP14210 728 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 VARSP26640 1264 aaKnown RBP11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 CSTF2P33240 577 aaKnown RBP eCLIP11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 MLLT3P42568 568 aaPredicted RBP11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 KRT6CP48668 564 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 PWP1Q13610 501 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 TGIF1Q15583 401 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 TCTE1Q5JU00 501 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 PHF19Q5T6S3 580 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 KANK2Q63ZY3 851 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 FRG2Q64ET8 278 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 FOXR1Q6PIV2 292 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 ATG14Q6ZNE5 492 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 CLYBLQ8N0X4 340 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 TRPV3Q8NET8 790 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 OR7G3Q8NG95 312 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 WDR20Q8TBZ3 569 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 USP7Q93009 1102 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 TM4SF19Q96DZ7 209 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 FAR2Q96K12 515 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 FCRL4Q96PJ5 515 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 FRG2BQ96QU4 278 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 CMKLR1Q99788 373 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 CCT7Q99832 543 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 C20orf27Q9GZN8 174 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 SYNDIG1Q9H7V2 258 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 FBXO8Q9NRD0 319 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 SOHLH2Q9NX45 425 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 AKAP7Q9P0M2 348 aaPredicted RBP11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 KLHL3Q9UH77 587 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 ZFP69BQ9UJL9 534 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 SNX6Q9UNH7 406 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 KLHL20Q9Y2M5 609 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 TRAF6Q9Y4K3 522 aa11.12□□□□□ -0.63
CHMP2A-207ENST00000600804 CCDC187A0A096LP49 1063 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 FITM1A5D6W6 292 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 NPIPB8E9PQR5 432 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 TERTO14746 1132 aaKnown RBP11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 ZSCAN9O15535 394 aaPredicted RBP11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 ITM2AO43736 263 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 LCMT2O60294 686 aaKnown RBP11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 PRAMEF10O60809 474 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 OR4F21O95013 312 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 TNFSF15O95150 251 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 CAPN1P07384 714 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 SERPINA6P08185 405 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 HSD3B1P14060 373 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 TSPAN8P19075 237 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 MPSTP25325 297 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 HSD3B2P26439 372 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 RBMS1P29558 406 aaKnown RBP11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 BCL6P41182 706 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 CCR10P46092 362 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 ARL4DP49703 201 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 ARFIP1P53367 373 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 KCNC4Q03721 635 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 SRSF1Q07955 248 aaKnown RBP eCLIP11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 IL11RAQ14626 422 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 C16orf72Q14CZ0 275 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 ZRSR2Q15696 482 aaKnown RBP11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 CPSF6Q16630 551 aaKnown RBP eCLIP11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 UGT3A2Q3SY77 523 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 SNAP47Q5SQN1 464 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 YOD1Q5VVQ6 348 aaPredicted RBP11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 CCDC81Q6ZN84 652 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 VN1R4Q7Z5H5 301 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 ADCK2Q7Z695 626 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 MTERF4Q7Z6M4 381 aaKnown RBP11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 MCATQ8IVS2 390 aaKnown RBP11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 BMPERQ8N8U9 685 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 ANKRD53Q8N9V6 530 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 CAMKVQ8NCB2 501 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 ZNF740Q8NDX6 193 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 METTL6Q8TCB7 284 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 NT5CQ8TCD5 201 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 CREB3L4Q8TEY5 395 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 METTL2AQ96IZ6 378 aaKnown RBP11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 CDK15Q96Q40 435 aa11.11□□□□□ -0.63
CHMP2A-207ENST00000600804 SPNS1Q9H2V7 528 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms