RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 ZUFSPQ96AP4 578 aa16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 RGMAQ96B86 450 aa16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 QRFPRQ96P65 431 aa16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 ABCA7Q8IZY2 2146 aa16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 OR2A25A4D2G3 310 aa16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 OR5K3A6NET4 321 aa16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 TRIM38O00635 465 aa16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 AKAP10O43572 662 aa16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 KLK1P06870 262 aa16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 RPS15AP62244 130 aaKnown RBP16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 RELAQ04206 551 aa16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 CEACAM7Q14002 265 aa16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 PGS1Q32NB8 556 aa16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 PLK5Q496M5 336 aa16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 SAMD4BQ5PRF9 694 aaKnown RBP16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 ARMC6Q6NXE6 501 aa16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 SPESP1Q6UW49 350 aa16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 SLC39A3Q9BRY0 314 aa16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 RMND5AQ9H871 391 aa16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 POMPQ9Y244 141 aa16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 KLHL20Q9Y2M5 609 aa16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 PCDHGA4Q9Y5G9 962 aa16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 LRIT2A6NDA9 550 aa16.87■□□□□ 0.29
SHKBP1-224ENST00000600718 PLPP1O14494 284 aa16.87■□□□□ 0.29
SHKBP1-224ENST00000600718 PPM1DO15297 605 aa16.87■□□□□ 0.29
SHKBP1-224ENST00000600718 NDUFS4O43181 175 aa16.87■□□□□ 0.29
SHKBP1-224ENST00000600718 HRO43593 1189 aa16.87■□□□□ 0.29
SHKBP1-224ENST00000600718 KCNH1O95259 989 aa16.87■□□□□ 0.29
SHKBP1-224ENST00000600718 SERPIND1P05546 499 aa16.87■□□□□ 0.29
SHKBP1-224ENST00000600718 ACTR3P61158 418 aa16.87■□□□□ 0.29
SHKBP1-224ENST00000600718 DEFB133Q30KQ1 61 aa16.87■□□□□ 0.29
SHKBP1-224ENST00000600718 SPATS1Q496A3 300 aa16.87■□□□□ 0.29
SHKBP1-224ENST00000600718 KLHL35Q6PF15 583 aa16.87■□□□□ 0.29
SHKBP1-224ENST00000600718 FIGLAQ6QHK4 219 aa16.87■□□□□ 0.29
SHKBP1-224ENST00000600718 DLEU7Q6UYE1 221 aa16.87■□□□□ 0.29
SHKBP1-224ENST00000600718 RIPOR1Q6ZS17 1223 aa16.87■□□□□ 0.29
SHKBP1-224ENST00000600718 DHDDSQ86SQ9 333 aa16.87■□□□□ 0.29
SHKBP1-224ENST00000600718 GPR180Q86V85 440 aa16.87■□□□□ 0.29
SHKBP1-224ENST00000600718 CDC26Q8NHZ8 85 aa16.87■□□□□ 0.29
SHKBP1-224ENST00000600718 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.87■□□□□ 0.29
SHKBP1-224ENST00000600718 C16orf78Q8WTQ4 265 aa16.87■□□□□ 0.29
SHKBP1-224ENST00000600718 GTF2H4Q92759 462 aa16.87■□□□□ 0.29
SHKBP1-224ENST00000600718 GFM2Q969S9 779 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-224ENST00000600718 ANKRD27Q96NW4 1050 aa16.87■□□□□ 0.29
SHKBP1-224ENST00000600718 PRPF18Q99633 342 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-224ENST00000600718 ABCD2Q9UBJ2 740 aa16.87■□□□□ 0.29
SHKBP1-224ENST00000600718 ADAM29Q9UKF5 820 aa16.87■□□□□ 0.29
SHKBP1-224ENST00000600718 PILRBQ9UKJ0 227 aa16.87■□□□□ 0.29
SHKBP1-224ENST00000600718 WBP11Q9Y2W2 641 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-224ENST00000600718 SNX11Q9Y5W9 270 aa16.87■□□□□ 0.29
SHKBP1-224ENST00000600718 C15orf38-AP3S2A0A0A6YYH1 394 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 SDC3O75056 442 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 SORBS2O94875 1100 aaKnown RBP16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 COX7A2P14406 83 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 SLC6A2P23975 617 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 BSGP35613 385 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 HPCAL1P37235 193 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 RPL3P39023 403 aaKnown RBP16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 KIR3DL1P43629 444 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 RXRGP48443 463 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 SLC7A2P52569 658 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 ARFIP1P53367 373 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 PHC1P78364 1004 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 BIRC2Q13490 618 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 CAPRIN1Q14444 709 aaKnown RBP16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 UGT8Q16880 541 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 HKDC1Q2TB90 917 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 CCNYL2Q5T2Q4 361 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 ARPINQ7Z6K5 226 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 TRIM73Q86UV7 250 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 ZNF761Q86XN6 746 aaPredicted RBP16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 OR8J2Q8NGG1 315 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 NELL1Q92832 810 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 THAP11Q96EK4 314 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 ITCHQ96J02 903 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 REXO4Q9GZR2 422 aaKnown RBP16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 MYNNQ9NPC7 610 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 TMEM74BQ9NUR3 256 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 UCKL1Q9NWZ5 548 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 CD300AQ9UGN4 299 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 PACSIN3Q9UKS6 424 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 L3MBTL1Q9Y468 752 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 A0A0J9YY10 115 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 LILRA5A6NI73 299 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 SCAMP2O15127 329 aaKnown RBP16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 CAPN5O15484 640 aaPredicted RBP16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 ENTPD5O75356 428 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 KLHL18O94889 574 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 MAGP20916 626 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 CNR2P34972 360 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 FBXO42Q6P3S6 717 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 CAMKMTQ7Z624 323 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 SLC15A3Q8IY34 581 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 OR7A2PQ8NGA2 310 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 CCDC124Q96CT7 223 aaKnown RBP16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 ZC3H10Q96K80 434 aaKnown RBP16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 ELF4Q99607 663 aaPredicted RBP16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 KCNH6Q9H252 994 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 SLAMF8Q9P0V8 285 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 ATP6V1HQ9UI12 483 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms